PubMed:22025213
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/22025213","sourcedb":"PubMed","sourceid":"22025213","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/22025213","text":"Human primary ductal carcinoma in situ (DCIS) subtype-specific pathology is preserved in a mouse intraductal (MIND) xenograft model.\nDuctal carcinoma in situ (DCIS) is a non-obligate precursor of invasive breast cancer. The current recognition that DCIS lesions exhibit inter- and intra-lesion diversity suggests that the process of evolution to invasive breast cancer is more complex than previously recognized. Here we demonstrate the reproducible growth of primary DCIS cells derived from patient's surgical and biopsy samples by the mouse intraductal (MIND) model. MIND involves injection of cells into the NOD-SCID IL2Rgamma$^{{\\rm{null}}}$ (NSG) mouse mammary ducts. Twelve (eight unique and four repeats) DCIS and two atypical hyperplasia specimens, heterogeneous with respect to biomarker expression and histology, were injected into 48 mouse mammary glands and analysed for successful xenotransplantation. Overall, 14/34 and 11/14 MIND xenotransplanted glands contained human DCIS and atypical hyperplastic cells, respectively, after 8 weeks, which formed single and multi-layered epithelium inside the ducts, and were heterogeneous with respect to expression of human cytokeratins, oestrogen receptor α (ER), and HER2. ER protein expression was recapitulated in MIND xenografts at ratios similar to the corresponding patient biopsies. In both patient biopsies and corresponding MIND xenografts, HER2 protein expression and nuclear HER2 gene overexpression were restricted to the DCIS lesions and were not found in the surrounding stroma or normal ducts. The xenografted DCIS lesions recapitulate the pathology and heterogeneity of human disease, thus providing a powerful tool for the characterization of the distinct cellular and molecular basis of inter- and intra-tumoural heterogeneity and the processes of DCIS to early invasive breast cancer progression.","tracks":[{"project":"c_corpus","denotations":[{"id":"T1","span":{"begin":0,"end":5},"obj":"D006801"},{"id":"T4","span":{"begin":14,"end":38},"obj":"D002285"},{"id":"T5","span":{"begin":14,"end":38},"obj":"D002285"},{"id":"T11","span":{"begin":40,"end":44},"obj":"CVCL_5552"},{"id":"T10","span":{"begin":40,"end":44},"obj":"D002285"},{"id":"T12","span":{"begin":40,"end":44},"obj":"D002285"},{"id":"T13","span":{"begin":89,"end":96},"obj":"MGI:87853"},{"id":"T14","span":{"begin":91,"end":96},"obj":"10090"},{"id":"T15","span":{"begin":91,"end":96},"obj":"D051379"},{"id":"T18","span":{"begin":140,"end":157},"obj":"D002278"},{"id":"T19","span":{"begin":140,"end":157},"obj":"D002278"},{"id":"T21","span":{"begin":159,"end":163},"obj":"CVCL_5552"},{"id":"T20","span":{"begin":159,"end":163},"obj":"D002285"},{"id":"T22","span":{"begin":159,"end":163},"obj":"D002285"},{"id":"T23","span":{"begin":183,"end":192},"obj":"PR:000000230"},{"id":"T24","span":{"begin":183,"end":192},"obj":"PR:000000291"},{"id":"T25","span":{"begin":205,"end":211},"obj":"UBERON:0000310"},{"id":"T26","span":{"begin":205,"end":218},"obj":"D001943"},{"id":"T27","span":{"begin":205,"end":218},"obj":"D001943"},{"id":"T29","span":{"begin":249,"end":253},"obj":"CVCL_5552"},{"id":"T28","span":{"begin":249,"end":253},"obj":"D002285"},{"id":"T30","span":{"begin":249,"end":253},"obj":"D002285"},{"id":"T31","span":{"begin":355,"end":361},"obj":"UBERON:0000310"},{"id":"T32","span":{"begin":355,"end":368},"obj":"D001943"},{"id":"T33","span":{"begin":355,"end":368},"obj":"D001943"},{"id":"T35","span":{"begin":468,"end":472},"obj":"CVCL_5552"},{"id":"T34","span":{"begin":468,"end":472},"obj":"D002285"},{"id":"T36","span":{"begin":468,"end":472},"obj":"D002285"},{"id":"T37","span":{"begin":537,"end":542},"obj":"10090"},{"id":"T38","span":{"begin":537,"end":542},"obj":"D051379"},{"id":"T39","span":{"begin":611,"end":614},"obj":"C6LR75"},{"id":"T40","span":{"begin":611,"end":614},"obj":"PR:000022907"},{"id":"T41","span":{"begin":611,"end":614},"obj":"Q7NSD8"},{"id":"T42","span":{"begin":611,"end":614},"obj":"Q8Z4M3"},{"id":"T43","span":{"begin":611,"end":614},"obj":"Q7UIY1"},{"id":"T44","span":{"begin":611,"end":614},"obj":"Q57LF5"},{"id":"T45","span":{"begin":611,"end":614},"obj":"Q88PP0"},{"id":"T46","span":{"begin":611,"end":614},"obj":"Q9I0H4"},{"id":"T47","span":{"begin":611,"end":614},"obj":"Q8GAZ4"},{"id":"T48","span":{"begin":611,"end":614},"obj":"Q7TTP0"},{"id":"T49","span":{"begin":611,"end":614},"obj":"Q03331"},{"id":"T50","span":{"begin":611,"end":614},"obj":"E2RTZ4"},{"id":"T51","span":{"begin":611,"end":614},"obj":"P40609"},{"id":"T53","span":{"begin":611,"end":614},"obj":"Q7WUM8"},{"id":"T54","span":{"begin":611,"end":614},"obj":"P39662"},{"id":"T55","span":{"begin":611,"end":614},"obj":"Q5PIH6"},{"id":"T56","span":{"begin":611,"end":614},"obj":"Q6D245"},{"id":"T57","span":{"begin":611,"end":614},"obj":"Q6HLA6"},{"id":"T58","span":{"begin":611,"end":614},"obj":"Q6LM37"},{"id":"T59","span":{"begin":611,"end":614},"obj":"P26353"},{"id":"T60","span":{"begin":611,"end":614},"obj":"Q9URY5"},{"id":"T61","span":{"begin":611,"end":614},"obj":"Q8ZCR0"},{"id":"T62","span":{"begin":611,"end":614},"obj":"Q8FF30"},{"id":"T63","span":{"begin":611,"end":614},"obj":"P39676"},{"id":"T64","span":{"begin":611,"end":614},"obj":"Q9RC40"},{"id":"T65","span":{"begin":611,"end":614},"obj":"Q7ABK6"},{"id":"T66","span":{"begin":611,"end":614},"obj":"Q7N215"},{"id":"T67","span":{"begin":611,"end":614},"obj":"Q73B49"},{"id":"T68","span":{"begin":611,"end":614},"obj":"Q81T23"},{"id":"T69","span":{"begin":611,"end":614},"obj":"Q8ETH0"},{"id":"T70","span":{"begin":611,"end":614},"obj":"Q9KMY3"},{"id":"T71","span":{"begin":611,"end":614},"obj":"P24232"},{"id":"T72","span":{"begin":611,"end":614},"obj":"Q9PH91"},{"id":"T73","span":{"begin":611,"end":614},"obj":"P49852"},{"id":"T74","span":{"begin":611,"end":614},"obj":"Q47266"},{"id":"T75","span":{"begin":611,"end":614},"obj":"Q87F90"},{"id":"T76","span":{"begin":611,"end":614},"obj":"Q7MH09"},{"id":"T77","span":{"begin":611,"end":614},"obj":"Q81FW4"},{"id":"T78","span":{"begin":611,"end":614},"obj":"Q7C0F9"},{"id":"T79","span":{"begin":611,"end":614},"obj":"PR:P18105"},{"id":"T80","span":{"begin":611,"end":614},"obj":"Q8DCU2"},{"id":"T81","span":{"begin":611,"end":614},"obj":"Q59MV9"},{"id":"T82","span":{"begin":611,"end":614},"obj":"Q7TTP2"},{"id":"T83","span":{"begin":611,"end":614},"obj":"Q7WHW5"},{"id":"T84","span":{"begin":611,"end":614},"obj":"Q9RYR5"},{"id":"T52","span":{"begin":611,"end":614},"obj":"D020191"},{"id":"T85","span":{"begin":620,"end":623},"obj":"P04351"},{"id":"T86","span":{"begin":620,"end":623},"obj":"Q07885"},{"id":"T87","span":{"begin":620,"end":623},"obj":"Q865X2"},{"id":"T88","span":{"begin":620,"end":623},"obj":"P19114"},{"id":"T89","span":{"begin":620,"end":623},"obj":"PR:P04351"},{"id":"T90","span":{"begin":620,"end":623},"obj":"Q7JFM2"},{"id":"T91","span":{"begin":620,"end":623},"obj":"Q08081"},{"id":"T92","span":{"begin":620,"end":623},"obj":"Q95KP3"},{"id":"T93","span":{"begin":620,"end":623},"obj":"PR:000001379"},{"id":"T94","span":{"begin":620,"end":623},"obj":"Q5MBA8"},{"id":"T95","span":{"begin":620,"end":623},"obj":"P60569"},{"id":"T96","span":{"begin":620,"end":623},"obj":"O77620"},{"id":"T97","span":{"begin":620,"end":623},"obj":"PR:P17108"},{"id":"T98","span":{"begin":620,"end":623},"obj":"Q4U313"},{"id":"T99","span":{"begin":620,"end":623},"obj":"P37997"},{"id":"T100","span":{"begin":620,"end":623},"obj":"Q9XS38"},{"id":"T102","span":{"begin":620,"end":623},"obj":"Q865Y1"},{"id":"T103","span":{"begin":620,"end":623},"obj":"Q9XT83"},{"id":"T104","span":{"begin":620,"end":623},"obj":"O97513"},{"id":"T105","span":{"begin":620,"end":623},"obj":"Q9XT84"},{"id":"T106","span":{"begin":620,"end":623},"obj":"Q1WM29"},{"id":"T107","span":{"begin":620,"end":623},"obj":"Q25BC3"},{"id":"T108","span":{"begin":620,"end":623},"obj":"Q2PE47"},{"id":"T109","span":{"begin":620,"end":623},"obj":"P68290"},{"id":"T110","span":{"begin":620,"end":623},"obj":"Q7JFM4"},{"id":"T111","span":{"begin":620,"end":623},"obj":"P68291"},{"id":"T112","span":{"begin":620,"end":623},"obj":"Q29416"},{"id":"T113","span":{"begin":620,"end":623},"obj":"P51747"},{"id":"T114","span":{"begin":620,"end":623},"obj":"Q7JFM5"},{"id":"T115","span":{"begin":620,"end":623},"obj":"Q8MKH2"},{"id":"T116","span":{"begin":620,"end":623},"obj":"P26891"},{"id":"T118","span":{"begin":620,"end":623},"obj":"P05016"},{"id":"T120","span":{"begin":620,"end":623},"obj":"Q2PE78"},{"id":"T121","span":{"begin":620,"end":623},"obj":"P60568"},{"id":"T122","span":{"begin":620,"end":623},"obj":"Q7JFM3"},{"id":"T123","span":{"begin":620,"end":623},"obj":"Q08867"},{"id":"T124","span":{"begin":620,"end":623},"obj":"Q29615"},{"id":"T125","span":{"begin":620,"end":623},"obj":"P17108"},{"id":"T126","span":{"begin":620,"end":623},"obj":"P36835"},{"id":"T127","span":{"begin":620,"end":623},"obj":"Q5PXD0"},{"id":"T128","span":{"begin":620,"end":623},"obj":"PR:P60568"},{"id":"T129","span":{"begin":620,"end":623},"obj":"P46649"},{"id":"T130","span":{"begin":620,"end":623},"obj":"O62641"},{"id":"T117","span":{"begin":620,"end":623},"obj":"D007376"},{"id":"T119","span":{"begin":620,"end":623},"obj":"D007376"},{"id":"T101","span":{"begin":620,"end":623},"obj":"GO:0005134"},{"id":"T131","span":{"begin":652,"end":657},"obj":"10090"},{"id":"T132","span":{"begin":652,"end":657},"obj":"D051379"},{"id":"T133","span":{"begin":666,"end":671},"obj":"UBERON:0000058"},{"id":"T135","span":{"begin":712,"end":716},"obj":"CVCL_5552"},{"id":"T134","span":{"begin":712,"end":716},"obj":"D002285"},{"id":"T136","span":{"begin":712,"end":716},"obj":"D002285"},{"id":"T137","span":{"begin":734,"end":745},"obj":"D006965"},{"id":"T138","span":{"begin":734,"end":745},"obj":"D006965"},{"id":"T139","span":{"begin":787,"end":796},"obj":"CHEBI:59163"},{"id":"T140","span":{"begin":845,"end":850},"obj":"10090"},{"id":"T141","span":{"begin":845,"end":850},"obj":"D051379"},{"id":"T142","span":{"begin":979,"end":984},"obj":"D006801"},{"id":"T144","span":{"begin":985,"end":989},"obj":"CVCL_5552"},{"id":"T143","span":{"begin":985,"end":989},"obj":"D002285"},{"id":"T145","span":{"begin":985,"end":989},"obj":"D002285"},{"id":"T146","span":{"begin":1090,"end":1100},"obj":"UBERON:0000483"},{"id":"T147","span":{"begin":1101,"end":1107},"obj":"SO:0001073"},{"id":"T148","span":{"begin":1112,"end":1117},"obj":"UBERON:0000058"},{"id":"T149","span":{"begin":1172,"end":1177},"obj":"D006801"},{"id":"T150","span":{"begin":1192,"end":1201},"obj":"CHEBI:50114"},{"id":"T151","span":{"begin":1223,"end":1226},"obj":"CVCL_1K15"},{"id":"T152","span":{"begin":1223,"end":1227},"obj":"PR:P04626"},{"id":"T153","span":{"begin":1223,"end":1227},"obj":"PR:000002082"},{"id":"T154","span":{"begin":1223,"end":1227},"obj":"PR:Q03557"},{"id":"T155","span":{"begin":1223,"end":1227},"obj":"PR:P34708"},{"id":"T156","span":{"begin":1223,"end":1227},"obj":"PR:Q5AK64"},{"id":"T160","span":{"begin":1232,"end":1239},"obj":"PR:000000001"},{"id":"T158","span":{"begin":1232,"end":1239},"obj":"CHEBI:36080"},{"id":"T159","span":{"begin":1232,"end":1239},"obj":"CHEBI:11122"},{"id":"T161","span":{"begin":1232,"end":1239},"obj":"SO:0000104"},{"id":"T157","span":{"begin":1232,"end":1239},"obj":"GO:0003675"},{"id":"T162","span":{"begin":1405,"end":1408},"obj":"CVCL_1K15"},{"id":"T163","span":{"begin":1405,"end":1409},"obj":"PR:P04626"},{"id":"T164","span":{"begin":1405,"end":1409},"obj":"PR:000002082"},{"id":"T165","span":{"begin":1405,"end":1409},"obj":"PR:Q03557"},{"id":"T166","span":{"begin":1405,"end":1409},"obj":"PR:P34708"},{"id":"T167","span":{"begin":1405,"end":1409},"obj":"PR:Q5AK64"},{"id":"T172","span":{"begin":1410,"end":1417},"obj":"SO:0000104"},{"id":"T169","span":{"begin":1410,"end":1417},"obj":"CHEBI:36080"},{"id":"T170","span":{"begin":1410,"end":1417},"obj":"CHEBI:11122"},{"id":"T171","span":{"begin":1410,"end":1417},"obj":"PR:000000001"},{"id":"T168","span":{"begin":1410,"end":1417},"obj":"GO:0003675"},{"id":"T173","span":{"begin":1441,"end":1444},"obj":"CVCL_1K15"},{"id":"T174","span":{"begin":1441,"end":1445},"obj":"PR:P04626"},{"id":"T175","span":{"begin":1441,"end":1445},"obj":"PR:000002082"},{"id":"T176","span":{"begin":1441,"end":1445},"obj":"PR:Q03557"},{"id":"T177","span":{"begin":1441,"end":1445},"obj":"PR:P34708"},{"id":"T178","span":{"begin":1441,"end":1445},"obj":"PR:Q5AK64"},{"id":"T179","span":{"begin":1446,"end":1450},"obj":"SO:0000704"},{"id":"T181","span":{"begin":1489,"end":1493},"obj":"CVCL_5552"},{"id":"T180","span":{"begin":1489,"end":1493},"obj":"D002285"},{"id":"T182","span":{"begin":1489,"end":1493},"obj":"D002285"},{"id":"T183","span":{"begin":1540,"end":1546},"obj":"UBERON:0003891"},{"id":"T184","span":{"begin":1557,"end":1562},"obj":"UBERON:0000058"},{"id":"T186","span":{"begin":1580,"end":1584},"obj":"CVCL_5552"},{"id":"T185","span":{"begin":1580,"end":1584},"obj":"D002285"},{"id":"T187","span":{"begin":1580,"end":1584},"obj":"D002285"},{"id":"T188","span":{"begin":1641,"end":1646},"obj":"D006801"},{"id":"T189","span":{"begin":1647,"end":1654},"obj":"D004194"},{"id":"T190","span":{"begin":1647,"end":1654},"obj":"D004194"},{"id":"T191","span":{"begin":1808,"end":1817},"obj":"UBERON:0004529"},{"id":"T193","span":{"begin":1821,"end":1825},"obj":"CVCL_5552"},{"id":"T192","span":{"begin":1821,"end":1825},"obj":"D002285"},{"id":"T194","span":{"begin":1821,"end":1825},"obj":"D002285"},{"id":"T195","span":{"begin":1844,"end":1850},"obj":"UBERON:0000310"},{"id":"T196","span":{"begin":1844,"end":1857},"obj":"D001943"},{"id":"T197","span":{"begin":1844,"end":1857},"obj":"D001943"}],"attributes":[{"subj":"T1","pred":"source","obj":"c_corpus"},{"subj":"T4","pred":"source","obj":"c_corpus"},{"subj":"T5","pred":"source","obj":"c_corpus"},{"subj":"T11","pred":"source","obj":"c_corpus"},{"subj":"T10","pred":"source","obj":"c_corpus"},{"subj":"T12","pred":"source","obj":"c_corpus"},{"subj":"T13","pred":"source","obj":"c_corpus"},{"subj":"T14","pred":"source","obj":"c_corpus"},{"subj":"T15","pred":"source","obj":"c_corpus"},{"subj":"T18","pred":"source","obj":"c_corpus"},{"subj":"T19","pred":"source","obj":"c_corpus"},{"subj":"T21","pred":"source","obj":"c_corpus"},{"subj":"T20","pred":"source","obj":"c_corpus"},{"subj":"T22","pred":"source","obj":"c_corpus"},{"subj":"T23","pred":"source","obj":"c_corpus"},{"subj":"T24","pred":"source","obj":"c_corpus"},{"subj":"T25","pred":"source","obj":"c_corpus"},{"subj":"T26","pred":"source","obj":"c_corpus"},{"subj":"T27","pred":"source","obj":"c_corpus"},{"subj":"T29","pred":"source","obj":"c_corpus"},{"subj":"T28","pred":"source","obj":"c_corpus"},{"subj":"T30","pred":"source","obj":"c_corpus"},{"subj":"T31","pred":"source","obj":"c_corpus"},{"subj":"T32","pred":"source","obj":"c_corpus"},{"subj":"T33","pred":"source","obj":"c_corpus"},{"subj":"T35","pred":"source","obj":"c_corpus"},{"subj":"T34","pred":"source","obj":"c_corpus"},{"subj":"T36","pred":"source","obj":"c_corpus"},{"subj":"T37","pred":"source","obj":"c_corpus"},{"subj":"T38","pred":"source","obj":"c_corpus"},{"subj":"T39","pred":"source","obj":"c_corpus"},{"subj":"T40","pred":"source","obj":"c_corpus"},{"subj":"T41","pred":"source","obj":"c_corpus"},{"subj":"T42","pred":"source","obj":"c_corpus"},{"subj":"T43","pred":"source","obj":"c_corpus"},{"subj":"T44","pred":"source","obj":"c_corpus"},{"subj":"T45","pred":"source","obj":"c_corpus"},{"subj":"T46","pred":"source","obj":"c_corpus"},{"subj":"T47","pred":"source","obj":"c_corpus"},{"subj":"T48","pred":"source","obj":"c_corpus"},{"subj":"T49","pred":"source","obj":"c_corpus"},{"subj":"T50","pred":"source","obj":"c_corpus"},{"subj":"T51","pred":"source","obj":"c_corpus"},{"subj":"T53","pred":"source","obj":"c_corpus"},{"subj":"T54","pred":"source","obj":"c_corpus"},{"subj":"T55","pred":"source","obj":"c_corpus"},{"subj":"T56","pred":"source","obj":"c_corpus"},{"subj":"T57","pred":"source","obj":"c_corpus"},{"subj":"T58","pred":"source","obj":"c_corpus"},{"subj":"T59","pred":"source","obj":"c_corpus"},{"subj":"T60","pred":"source","obj":"c_corpus"},{"subj":"T61","pred":"source","obj":"c_corpus"},{"subj":"T62","pred":"source","obj":"c_corpus"},{"subj":"T63","pred":"source","obj":"c_corpus"},{"subj":"T64","pred":"source","obj":"c_corpus"},{"subj":"T65","pred":"source","obj":"c_corpus"},{"subj":"T66","pred":"source","obj":"c_corpus"},{"subj":"T67","pred":"source","obj":"c_corpus"},{"subj":"T68","pred":"source","obj":"c_corpus"},{"subj":"T69","pred":"source","obj":"c_corpus"},{"subj":"T70","pred":"source","obj":"c_corpus"},{"subj":"T71","pred":"source","obj":"c_corpus"},{"subj":"T72","pred":"source","obj":"c_corpus"},{"subj":"T73","pred":"source","obj":"c_corpus"},{"subj":"T74","pred":"source","obj":"c_corpus"},{"subj":"T75","pred":"source","obj":"c_corpus"},{"subj":"T76","pred":"source","obj":"c_corpus"},{"subj":"T77","pred":"source","obj":"c_corpus"},{"subj":"T78","pred":"source","obj":"c_corpus"},{"subj":"T79","pred":"source","obj":"c_corpus"},{"subj":"T80","pred":"source","obj":"c_corpus"},{"subj":"T81","pred":"source","obj":"c_corpus"},{"subj":"T82","pred":"source","obj":"c_corpus"},{"subj":"T83","pred":"source","obj":"c_corpus"},{"subj":"T84","pred":"source","obj":"c_corpus"},{"subj":"T52","pred":"source","obj":"c_corpus"},{"subj":"T85","pred":"source","obj":"c_corpus"},{"subj":"T86","pred":"source","obj":"c_corpus"},{"subj":"T87","pred":"source","obj":"c_corpus"},{"subj":"T88","pred":"source","obj":"c_corpus"},{"subj":"T89","pred":"source","obj":"c_corpus"},{"subj":"T90","pred":"source","obj":"c_corpus"},{"subj":"T91","pred":"source","obj":"c_corpus"},{"subj":"T92","pred":"source","obj":"c_corpus"},{"subj":"T93","pred":"source","obj":"c_corpus"},{"subj":"T94","pred":"source","obj":"c_corpus"},{"subj":"T95","pred":"source","obj":"c_corpus"},{"subj":"T96","pred":"source","obj":"c_corpus"},{"subj":"T97","pred":"source","obj":"c_corpus"},{"subj":"T98","pred":"source","obj":"c_corpus"},{"subj":"T99","pred":"source","obj":"c_corpus"},{"subj":"T100","pred":"source","obj":"c_corpus"},{"subj":"T102","pred":"source","obj":"c_corpus"},{"subj":"T103","pred":"source","obj":"c_corpus"},{"subj":"T104","pred":"source","obj":"c_corpus"},{"subj":"T105","pred":"source","obj":"c_corpus"},{"subj":"T106","pred":"source","obj":"c_corpus"},{"subj":"T107","pred":"source","obj":"c_corpus"},{"subj":"T108","pred":"source","obj":"c_corpus"},{"subj":"T109","pred":"source","obj":"c_corpus"},{"subj":"T110","pred":"source","obj":"c_corpus"},{"subj":"T111","pred":"source","obj":"c_corpus"},{"subj":"T112","pred":"source","obj":"c_corpus"},{"subj":"T113","pred":"source","obj":"c_corpus"},{"subj":"T114","pred":"source","obj":"c_corpus"},{"subj":"T115","pred":"source","obj":"c_corpus"},{"subj":"T116","pred":"source","obj":"c_corpus"},{"subj":"T118","pred":"source","obj":"c_corpus"},{"subj":"T120","pred":"source","obj":"c_corpus"},{"subj":"T121","pred":"source","obj":"c_corpus"},{"subj":"T122","pred":"source","obj":"c_corpus"},{"subj":"T123","pred":"source","obj":"c_corpus"},{"subj":"T124","pred":"source","obj":"c_corpus"},{"subj":"T125","pred":"source","obj":"c_corpus"},{"subj":"T126","pred":"source","obj":"c_corpus"},{"subj":"T127","pred":"source","obj":"c_corpus"},{"subj":"T128","pred":"source","obj":"c_corpus"},{"subj":"T129","pred":"source","obj":"c_corpus"},{"subj":"T130","pred":"source","obj":"c_corpus"},{"subj":"T117","pred":"source","obj":"c_corpus"},{"subj":"T119","pred":"source","obj":"c_corpus"},{"subj":"T101","pred":"source","obj":"c_corpus"},{"subj":"T131","pred":"source","obj":"c_corpus"},{"subj":"T132","pred":"source","obj":"c_corpus"},{"subj":"T133","pred":"source","obj":"c_corpus"},{"subj":"T135","pred":"source","obj":"c_corpus"},{"subj":"T134","pred":"source","obj":"c_corpus"},{"subj":"T136","pred":"source","obj":"c_corpus"},{"subj":"T137","pred":"source","obj":"c_corpus"},{"subj":"T138","pred":"source","obj":"c_corpus"},{"subj":"T139","pred":"source","obj":"c_corpus"},{"subj":"T140","pred":"source","obj":"c_corpus"},{"subj":"T141","pred":"source","obj":"c_corpus"},{"subj":"T142","pred":"source","obj":"c_corpus"},{"subj":"T144","pred":"source","obj":"c_corpus"},{"subj":"T143","pred":"source","obj":"c_corpus"},{"subj":"T145","pred":"source","obj":"c_corpus"},{"subj":"T146","pred":"source","obj":"c_corpus"},{"subj":"T147","pred":"source","obj":"c_corpus"},{"subj":"T148","pred":"source","obj":"c_corpus"},{"subj":"T149","pred":"source","obj":"c_corpus"},{"subj":"T150","pred":"source","obj":"c_corpus"},{"subj":"T151","pred":"source","obj":"c_corpus"},{"subj":"T152","pred":"source","obj":"c_corpus"},{"subj":"T153","pred":"source","obj":"c_corpus"},{"subj":"T154","pred":"source","obj":"c_corpus"},{"subj":"T155","pred":"source","obj":"c_corpus"},{"subj":"T156","pred":"source","obj":"c_corpus"},{"subj":"T160","pred":"source","obj":"c_corpus"},{"subj":"T158","pred":"source","obj":"c_corpus"},{"subj":"T159","pred":"source","obj":"c_corpus"},{"subj":"T161","pred":"source","obj":"c_corpus"},{"subj":"T157","pred":"source","obj":"c_corpus"},{"subj":"T162","pred":"source","obj":"c_corpus"},{"subj":"T163","pred":"source","obj":"c_corpus"},{"subj":"T164","pred":"source","obj":"c_corpus"},{"subj":"T165","pred":"source","obj":"c_corpus"},{"subj":"T166","pred":"source","obj":"c_corpus"},{"subj":"T167","pred":"source","obj":"c_corpus"},{"subj":"T172","pred":"source","obj":"c_corpus"},{"subj":"T169","pred":"source","obj":"c_corpus"},{"subj":"T170","pred":"source","obj":"c_corpus"},{"subj":"T171","pred":"source","obj":"c_corpus"},{"subj":"T168","pred":"source","obj":"c_corpus"},{"subj":"T173","pred":"source","obj":"c_corpus"},{"subj":"T174","pred":"source","obj":"c_corpus"},{"subj":"T175","pred":"source","obj":"c_corpus"},{"subj":"T176","pred":"source","obj":"c_corpus"},{"subj":"T177","pred":"source","obj":"c_corpus"},{"subj":"T178","pred":"source","obj":"c_corpus"},{"subj":"T179","pred":"source","obj":"c_corpus"},{"subj":"T181","pred":"source","obj":"c_corpus"},{"subj":"T180","pred":"source","obj":"c_corpus"},{"subj":"T182","pred":"source","obj":"c_corpus"},{"subj":"T183","pred":"source","obj":"c_corpus"},{"subj":"T184","pred":"source","obj":"c_corpus"},{"subj":"T186","pred":"source","obj":"c_corpus"},{"subj":"T185","pred":"source","obj":"c_corpus"},{"subj":"T187","pred":"source","obj":"c_corpus"},{"subj":"T188","pred":"source","obj":"c_corpus"},{"subj":"T189","pred":"source","obj":"c_corpus"},{"subj":"T190","pred":"source","obj":"c_corpus"},{"subj":"T191","pred":"source","obj":"c_corpus"},{"subj":"T193","pred":"source","obj":"c_corpus"},{"subj":"T192","pred":"source","obj":"c_corpus"},{"subj":"T194","pred":"source","obj":"c_corpus"},{"subj":"T195","pred":"source","obj":"c_corpus"},{"subj":"T196","pred":"source","obj":"c_corpus"},{"subj":"T197","pred":"source","obj":"c_corpus"}]},{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":1405,"end":1409},"obj":"gene:2064"},{"id":"T1","span":{"begin":1489,"end":1493},"obj":"disease:C0007124"},{"id":"T2","span":{"begin":1441,"end":1445},"obj":"gene:2064"},{"id":"T3","span":{"begin":1489,"end":1493},"obj":"disease:C0007124"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"},{"id":"R2","pred":"associated_with","subj":"T2","obj":"T3"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"attributes":[{"subj":"T0","pred":"source","obj":"DisGeNET"},{"subj":"T1","pred":"source","obj":"DisGeNET"},{"subj":"T2","pred":"source","obj":"DisGeNET"},{"subj":"T3","pred":"source","obj":"DisGeNET"}]},{"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":205,"end":218},"obj":"HP_0003002"},{"id":"T2","span":{"begin":205,"end":218},"obj":"HP_0100013"},{"id":"T3","span":{"begin":212,"end":218},"obj":"HP_0002664"},{"id":"T4","span":{"begin":355,"end":368},"obj":"HP_0003002"},{"id":"T5","span":{"begin":355,"end":368},"obj":"HP_0100013"},{"id":"T6","span":{"begin":362,"end":368},"obj":"HP_0002664"},{"id":"T7","span":{"begin":1777,"end":1785},"obj":"HP_0002664"},{"id":"T8","span":{"begin":1844,"end":1857},"obj":"HP_0003002"},{"id":"T9","span":{"begin":1844,"end":1857},"obj":"HP_0100013"},{"id":"T10","span":{"begin":1851,"end":1857},"obj":"HP_0002664"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubmedHPO"},{"subj":"T2","pred":"source","obj":"PubmedHPO"},{"subj":"T3","pred":"source","obj":"PubmedHPO"},{"subj":"T4","pred":"source","obj":"PubmedHPO"},{"subj":"T5","pred":"source","obj":"PubmedHPO"},{"subj":"T6","pred":"source","obj":"PubmedHPO"},{"subj":"T7","pred":"source","obj":"PubmedHPO"},{"subj":"T8","pred":"source","obj":"PubmedHPO"},{"subj":"T9","pred":"source","obj":"PubmedHPO"},{"subj":"T10","pred":"source","obj":"PubmedHPO"}]},{"project":"Allie","denotations":[{"id":"SS1_22025213_0_0","span":{"begin":14,"end":38},"obj":"expanded"},{"id":"SS2_22025213_0_0","span":{"begin":40,"end":44},"obj":"abbr"},{"id":"SS1_22025213_0_1","span":{"begin":91,"end":108},"obj":"expanded"},{"id":"SS2_22025213_0_1","span":{"begin":110,"end":114},"obj":"abbr"},{"id":"SS1_22025213_1_0","span":{"begin":159,"end":540},"obj":"expanded"},{"id":"SS2_22025213_1_0","span":{"begin":559,"end":649},"obj":"abbr"},{"id":"SS1_22025213_3_0","span":{"begin":537,"end":554},"obj":"expanded"},{"id":"SS2_22025213_3_0","span":{"begin":556,"end":560},"obj":"abbr"}],"relations":[{"id":"AE1_22025213_0_0","pred":"abbreviatedTo","subj":"SS1_22025213_0_0","obj":"SS2_22025213_0_0"},{"id":"AE1_22025213_0_1","pred":"abbreviatedTo","subj":"SS1_22025213_0_1","obj":"SS2_22025213_0_1"},{"id":"AE1_22025213_1_0","pred":"abbreviatedTo","subj":"SS1_22025213_1_0","obj":"SS2_22025213_1_0"},{"id":"AE1_22025213_3_0","pred":"abbreviatedTo","subj":"SS1_22025213_3_0","obj":"SS2_22025213_3_0"}],"attributes":[{"subj":"SS1_22025213_0_0","pred":"source","obj":"Allie"},{"subj":"SS2_22025213_0_0","pred":"source","obj":"Allie"},{"subj":"SS1_22025213_0_1","pred":"source","obj":"Allie"},{"subj":"SS2_22025213_0_1","pred":"source","obj":"Allie"},{"subj":"SS1_22025213_1_0","pred":"source","obj":"Allie"},{"subj":"SS2_22025213_1_0","pred":"source","obj":"Allie"},{"subj":"SS1_22025213_3_0","pred":"source","obj":"Allie"},{"subj":"SS2_22025213_3_0","pred":"source","obj":"Allie"}]},{"project":"UseCases_ArguminSci_Discourse","denotations":[{"id":"T1","span":{"begin":0,"end":132},"obj":"DRI_Background"},{"id":"T2","span":{"begin":133,"end":219},"obj":"DRI_Background"},{"id":"T3","span":{"begin":220,"end":412},"obj":"DRI_Outcome"},{"id":"T4","span":{"begin":413,"end":568},"obj":"DRI_Outcome"},{"id":"T5","span":{"begin":569,"end":610},"obj":"DRI_Approach"},{"id":"T6","span":{"begin":611,"end":629},"obj":"Token_Label.OUTSIDE"},{"id":"T7","span":{"begin":629,"end":673},"obj":"DRI_Approach"},{"id":"T8","span":{"begin":674,"end":915},"obj":"DRI_Outcome"},{"id":"T9","span":{"begin":916,"end":1229},"obj":"DRI_Outcome"},{"id":"T10","span":{"begin":1230,"end":1345},"obj":"DRI_Approach"},{"id":"T11","span":{"begin":1346,"end":1564},"obj":"DRI_Background"},{"id":"T12","span":{"begin":1565,"end":1870},"obj":"DRI_Background"}],"attributes":[{"subj":"T1","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T2","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T3","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T4","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T5","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T6","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T7","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T8","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T9","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T10","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T11","pred":"source","obj":"UseCases_ArguminSci_Discourse"},{"subj":"T12","pred":"source","obj":"UseCases_ArguminSci_Discourse"}]},{"project":"PubMed_ArguminSci","denotations":[{"id":"T1","span":{"begin":133,"end":219},"obj":"DRI_Background"},{"id":"T2","span":{"begin":220,"end":412},"obj":"DRI_Outcome"},{"id":"T3","span":{"begin":413,"end":568},"obj":"DRI_Outcome"},{"id":"T4","span":{"begin":569,"end":610},"obj":"DRI_Approach"},{"id":"T5","span":{"begin":629,"end":672},"obj":"DRI_Approach"},{"id":"T6","span":{"begin":673,"end":914},"obj":"DRI_Outcome"},{"id":"T7","span":{"begin":915,"end":1228},"obj":"DRI_Outcome"},{"id":"T8","span":{"begin":1229,"end":1344},"obj":"DRI_Approach"},{"id":"T9","span":{"begin":1345,"end":1563},"obj":"DRI_Background"},{"id":"T10","span":{"begin":1564,"end":1870},"obj":"DRI_Background"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T2","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T3","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T4","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T5","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T6","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T7","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T8","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T9","pred":"source","obj":"PubMed_ArguminSci"},{"subj":"T10","pred":"source","obj":"PubMed_ArguminSci"}]},{"project":"DisGeNET5_gene_disease","denotations":[{"id":"22025213-8#60#64#gene2064","span":{"begin":1405,"end":1409},"obj":"gene2064"},{"id":"22025213-8#96#100#gene2064","span":{"begin":1441,"end":1445},"obj":"gene2064"},{"id":"22025213-8#144#148#diseaseC0007124","span":{"begin":1489,"end":1493},"obj":"diseaseC0007124"}],"relations":[{"id":"60#64#gene2064144#148#diseaseC0007124","pred":"associated_with","subj":"22025213-8#60#64#gene2064","obj":"22025213-8#144#148#diseaseC0007124"},{"id":"96#100#gene2064144#148#diseaseC0007124","pred":"associated_with","subj":"22025213-8#96#100#gene2064","obj":"22025213-8#144#148#diseaseC0007124"}],"attributes":[{"subj":"22025213-8#60#64#gene2064","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"22025213-8#96#100#gene2064","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"22025213-8#144#148#diseaseC0007124","pred":"source","obj":"DisGeNET5_gene_disease"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"c_corpus","color":"#be93ec","default":true},{"id":"DisGeNET","color":"#93eca4"},{"id":"PubmedHPO","color":"#ec939b"},{"id":"Allie","color":"#93b6ec"},{"id":"UseCases_ArguminSci_Discourse","color":"#d0ec93"},{"id":"PubMed_ArguminSci","color":"#ec93ea"},{"id":"DisGeNET5_gene_disease","color":"#93ecd4"}]}]}}