PubMed:21904390
Annnotations
LitCoin-entities-OrganismTaxon-PD
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 457-461 | OrganismTaxon | denotes | iris | NCBItxid:444649|NCBItxid:26378 |
| T3 | 1051-1055 | OrganismTaxon | denotes | iris | NCBItxid:444649|NCBItxid:26378 |
| T5 | 1807-1811 | OrganismTaxon | denotes | iris | NCBItxid:444649|NCBItxid:26378 |
LitCoin-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-97 | Sentence | denotes | Two novel mutations of the PAX6 gene causing different phenotype in a cohort of Chinese patients. |
| T2 | 98-106 | Sentence | denotes | PURPOSE: |
| T3 | 107-230 | Sentence | denotes | Aniridia (AN) is a rare congenital panocular disorder caused by the mutations of the paired box homeotic gene 6(PAX6) gene. |
| T4 | 231-326 | Sentence | denotes | The PAX6gene is also involved in other anterior segment malformations including Peters anomaly. |
| T5 | 327-509 | Sentence | denotes | We studied the PAX6gene mutations in a cohort of affected individuals with different clinical phenotype including AN, coloboma of iris and choroid, or anterior segment malformations. |
| T6 | 510-531 | Sentence | denotes | PATIENTS AND METHODS: |
| T7 | 532-605 | Sentence | denotes | Six unrelated families and 10 sporadic patients were examined clinically. |
| T8 | 606-711 | Sentence | denotes | After informed consent was obtained, genomic DNA was extracted from the venous blood of all participants. |
| T9 | 712-826 | Sentence | denotes | Mutation screening of all exons of the PAX6gene was performed by direct sequencing of PCR-amplified DNA fragments. |
| T10 | 827-923 | Sentence | denotes | Multiplex ligation-dependent probe amplification (MLPA) was performed to detect large deletions. |
| T11 | 924-932 | Sentence | denotes | RESULTS: |
| T12 | 933-1134 | Sentence | denotes | By clinical examination, the patients and the pedigrees were divided into the following three groups: AN, coloboma of iris and choroids, and the anterior segment malformations including peters anomaly. |
| T13 | 1135-1318 | Sentence | denotes | Sequencing of the PAX6gene, three intragenic mutations including a novel heterozygous splicing-site mutations c.357-3C>G (p.Ser119fsX) were identified in the patients of the AN group. |
| T14 | 1319-1420 | Sentence | denotes | A novel missense mutation c.643T>C (p.S216P) was detected in the anterior segment malformation group. |
| T15 | 1421-1566 | Sentence | denotes | The mutation p.S216P located in the homeodomain region of the PAX6 caused the phenotype of Peters anomaly in family A6 with different expressing. |
| T16 | 1567-1714 | Sentence | denotes | Through MLPA analysis, a large deletion including the whole PAX6gene and DKFZ p686k1684gene was detected in one sporadic patient from the AN group. |
| T17 | 1715-1824 | Sentence | denotes | Neither intragenic mutation nor large deletion was identified in the group with coloboma of iris and choroid. |
| T18 | 1825-1836 | Sentence | denotes | CONCLUSION: |
| T19 | 1837-2046 | Sentence | denotes | Our findings further confirmed that different kind of mutations might cause different ocular phenotype, and clearly clinical phenotype classification might increase the mutation detection rate of the PAX6gene. |
LitCoin-entities
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| 8896 | 27-31 | GeneOrGeneProduct | denotes | PAX6 | NCBIGene:5080 |
| 8897 | 88-96 | OrganismTaxon | denotes | patients | NCBITaxon:9606 |
| 8898 | 107-115 | DiseaseOrPhenotypicFeature | denotes | Aniridia | MESH:D015783 |
| 8899 | 117-119 | DiseaseOrPhenotypicFeature | denotes | AN | MESH:D015783 |
| 8900 | 131-160 | DiseaseOrPhenotypicFeature | denotes | congenital panocular disorder | MESH:D000013 |
| 8901 | 192-218 | GeneOrGeneProduct | denotes | paired box homeotic gene 6 | NCBIGene:5080 |
| 8902 | 219-223 | GeneOrGeneProduct | denotes | PAX6 | NCBIGene:5080 |
| 8903 | 235-239 | GeneOrGeneProduct | denotes | PAX6 | NCBIGene:5080 |
| 8904 | 270-300 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformations | MESH:C537775 |
| 8905 | 311-325 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | MESH:C537884 |
| 8906 | 342-346 | GeneOrGeneProduct | denotes | PAX6 | NCBIGene:5080 |
| 8907 | 441-443 | DiseaseOrPhenotypicFeature | denotes | AN | MESH:D015783 |
| 8908 | 445-473 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris and choroid | MESH:D003103 |
| 8909 | 478-508 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformations | MESH:C537775 |
| 8910 | 510-518 | OrganismTaxon | denotes | PATIENTS | NCBITaxon:9606 |
| 8911 | 571-579 | OrganismTaxon | denotes | patients | NCBITaxon:9606 |
| 8912 | 751-755 | GeneOrGeneProduct | denotes | PAX6 | NCBIGene:5080 |
| 8913 | 962-970 | OrganismTaxon | denotes | patients | NCBITaxon:9606 |
| 8914 | 1035-1037 | DiseaseOrPhenotypicFeature | denotes | AN | MESH:D015783 |
| 8915 | 1039-1068 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris and choroids | MESH:D003103 |
| 8916 | 1078-1108 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformations | MESH:C537775 |
| 8917 | 1119-1133 | DiseaseOrPhenotypicFeature | denotes | peters anomaly | MESH:C537884 |
| 8918 | 1153-1157 | GeneOrGeneProduct | denotes | PAX6 | NCBIGene:5080 |
| 8919 | 1245-1255 | SequenceVariant | denotes | c.357-3C>G | c|SUB|C|357-3|G |
| 8920 | 1257-1268 | SequenceVariant | denotes | p.Ser119fsX | p|FS|S|119|| |
| 8921 | 1293-1301 | OrganismTaxon | denotes | patients | NCBITaxon:9606 |
| 8922 | 1309-1311 | DiseaseOrPhenotypicFeature | denotes | AN | MESH:D015783 |
| 8923 | 1345-1353 | SequenceVariant | denotes | c.643T>C | c|SUB|T|643|C |
| 8924 | 1355-1362 | SequenceVariant | denotes | p.S216P | p|SUB|S|216|P |
| 8925 | 1384-1413 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformation | MESH:C537775 |
| 8926 | 1434-1441 | SequenceVariant | denotes | p.S216P | p|SUB|S|216|P |
| 8927 | 1483-1487 | GeneOrGeneProduct | denotes | PAX6 | NCBIGene:5080 |
| 8928 | 1512-1526 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | MESH:C537884 |
| 8929 | 1627-1631 | GeneOrGeneProduct | denotes | PAX6 | NCBIGene:5080 |
| 8930 | 1640-1654 | GeneOrGeneProduct | denotes | DKFZ p686k1684 | |
| 8931 | 1688-1695 | OrganismTaxon | denotes | patient | NCBITaxon:9606 |
| 8932 | 1705-1707 | DiseaseOrPhenotypicFeature | denotes | AN | MESH:D015783 |
| 8933 | 1795-1823 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris and choroid | MESH:D003103 |
| 8934 | 2037-2041 | GeneOrGeneProduct | denotes | PAX6 | NCBIGene:5080 |
LitCoin_Mondo
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 107-115 | DiseaseOrPhenotypicFeature | denotes | Aniridia | 0019172 |
| T2 | 126-130 | DiseaseOrPhenotypicFeature | denotes | rare | 0021136 |
| T3 | 131-141 | DiseaseOrPhenotypicFeature | denotes | congenital | 0021140 |
| T4 | 311-325 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | 0011414 |
| T5 | 445-461 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris | 0020356 |
| T6 | 445-453 | DiseaseOrPhenotypicFeature | denotes | coloboma | 0001476 |
| T7 | 466-473 | DiseaseOrPhenotypicFeature | denotes | choroid | 0001280 |
| T8 | 1039-1055 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris | 0020356 |
| T9 | 1039-1047 | DiseaseOrPhenotypicFeature | denotes | coloboma | 0001476 |
| T10 | 1060-1068 | DiseaseOrPhenotypicFeature | denotes | choroids | 0001280 |
| T11 | 1119-1133 | DiseaseOrPhenotypicFeature | denotes | peters anomaly | 0011414 |
| T12 | 1512-1526 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | 0011414 |
| T13 | 1795-1811 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris | 0020356 |
| T14 | 1795-1803 | DiseaseOrPhenotypicFeature | denotes | coloboma | 0001476 |
| T15 | 1816-1823 | DiseaseOrPhenotypicFeature | denotes | choroid | 0001280 |
LitCoin-SeqVar
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1245-1255 | SequenceVariant | denotes | c.357-3C>G |
| T2 | 1257-1268 | SequenceVariant | denotes | p.Ser119fsX |
| T3 | 1345-1353 | SequenceVariant | denotes | c.643T>C |
| T4 | 1355-1362 | SequenceVariant | denotes | p.S216P |
| T5 | 1434-1441 | SequenceVariant | denotes | p.S216P |
LitCoin-GeneOrGeneProduct-v0
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 4-9 | GeneOrGeneProduct | denotes | novel |
| T2 | 10-19 | GeneOrGeneProduct | denotes | mutations |
| T3 | 27-31 | GeneOrGeneProduct | denotes | PAX6 |
| T4 | 65-69 | GeneOrGeneProduct | denotes | in a |
| T5 | 126-130 | GeneOrGeneProduct | denotes | rare |
| T6 | 175-184 | GeneOrGeneProduct | denotes | mutations |
| T7 | 192-218 | GeneOrGeneProduct | denotes | paired box homeotic gene 6 |
| T8 | 219-223 | GeneOrGeneProduct | denotes | PAX6 |
| T9 | 264-269 | GeneOrGeneProduct | denotes | other |
| T10 | 287-300 | GeneOrGeneProduct | denotes | malformations |
| T11 | 351-360 | GeneOrGeneProduct | denotes | mutations |
| T12 | 457-461 | GeneOrGeneProduct | denotes | iris |
| T13 | 495-508 | GeneOrGeneProduct | denotes | malformations |
| T14 | 519-530 | GeneOrGeneProduct | denotes | AND METHODS |
| T15 | 694-697 | GeneOrGeneProduct | denotes | all |
| T16 | 712-720 | GeneOrGeneProduct | denotes | Mutation |
| T17 | 734-737 | GeneOrGeneProduct | denotes | all |
| T18 | 877-881 | GeneOrGeneProduct | denotes | MLPA |
| T19 | 907-912 | GeneOrGeneProduct | denotes | large |
| T20 | 1051-1055 | GeneOrGeneProduct | denotes | iris |
| T21 | 1095-1108 | GeneOrGeneProduct | denotes | malformations |
| T22 | 1180-1189 | GeneOrGeneProduct | denotes | mutations |
| T23 | 1202-1207 | GeneOrGeneProduct | denotes | novel |
| T24 | 1221-1229 | GeneOrGeneProduct | denotes | splicing |
| T25 | 1235-1244 | GeneOrGeneProduct | denotes | mutations |
| T26 | 1321-1326 | GeneOrGeneProduct | denotes | novel |
| T27 | 1327-1335 | GeneOrGeneProduct | denotes | missense |
| T28 | 1336-1344 | GeneOrGeneProduct | denotes | mutation |
| T29 | 1401-1413 | GeneOrGeneProduct | denotes | malformation |
| T30 | 1425-1433 | GeneOrGeneProduct | denotes | mutation |
| T31 | 1457-1468 | GeneOrGeneProduct | denotes | homeodomain |
| T32 | 1483-1487 | GeneOrGeneProduct | denotes | PAX6 |
| T33 | 1575-1579 | GeneOrGeneProduct | denotes | MLPA |
| T34 | 1592-1597 | GeneOrGeneProduct | denotes | large |
| T35 | 1734-1742 | GeneOrGeneProduct | denotes | mutation |
| T36 | 1747-1752 | GeneOrGeneProduct | denotes | large |
| T37 | 1807-1811 | GeneOrGeneProduct | denotes | iris |
| T38 | 1841-1849 | GeneOrGeneProduct | denotes | findings |
| T39 | 1883-1887 | GeneOrGeneProduct | denotes | kind |
| T40 | 1888-1900 | GeneOrGeneProduct | denotes | of mutations |
| T41 | 2006-2014 | GeneOrGeneProduct | denotes | mutation |
LitCoin-GeneOrGeneProduct-v2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 4-9 | GeneOrGeneProduct | denotes | novel |
| T2 | 27-31 | GeneOrGeneProduct | denotes | PAX6 |
| T3 | 126-130 | GeneOrGeneProduct | denotes | rare |
| T4 | 192-218 | GeneOrGeneProduct | denotes | paired box homeotic gene 6 |
| T5 | 219-223 | GeneOrGeneProduct | denotes | PAX6 |
| T6 | 264-269 | GeneOrGeneProduct | denotes | other |
| T7 | 457-461 | GeneOrGeneProduct | denotes | iris |
| T8 | 907-912 | GeneOrGeneProduct | denotes | large |
| T9 | 1051-1055 | GeneOrGeneProduct | denotes | iris |
| T10 | 1202-1207 | GeneOrGeneProduct | denotes | novel |
| T11 | 1321-1326 | GeneOrGeneProduct | denotes | novel |
| T12 | 1457-1468 | GeneOrGeneProduct | denotes | homeodomain |
| T13 | 1483-1487 | GeneOrGeneProduct | denotes | PAX6 |
| T14 | 1592-1597 | GeneOrGeneProduct | denotes | large |
| T15 | 1747-1752 | GeneOrGeneProduct | denotes | large |
| T16 | 1807-1811 | GeneOrGeneProduct | denotes | iris |
LitCoin-Disease-MeSH
| Id | Subject | Object | Predicate | Lexical cue | originalLabel |
|---|---|---|---|---|---|
| T1 | 107-115 | DiseaseOrPhenotypicFeature | denotes | Aniridia | D015783 |
| T2 | 311-325 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | C537884 |
| T3 | 445-453 | DiseaseOrPhenotypicFeature | denotes | coloboma | D003103 |
| T4 | 1039-1047 | DiseaseOrPhenotypicFeature | denotes | coloboma | D003103 |
| T5 | 1060-1068 | DiseaseOrPhenotypicFeature | denotes | choroids | D002833 |
| T6 | 1119-1133 | DiseaseOrPhenotypicFeature | denotes | peters anomaly | C537884 |
| T7 | 1512-1526 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | C537884 |
| T8 | 1795-1803 | DiseaseOrPhenotypicFeature | denotes | coloboma | D003103 |
LitCoin-GeneOrGeneProduct-v3
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 27-31 | GeneOrGeneProduct | denotes | PAX6 |
| T2 | 192-218 | GeneOrGeneProduct | denotes | paired box homeotic gene 6 |
| T3 | 219-223 | GeneOrGeneProduct | denotes | PAX6 |
| T4 | 1457-1468 | GeneOrGeneProduct | denotes | homeodomain |
| T5 | 1483-1487 | GeneOrGeneProduct | denotes | PAX6 |
LitCoin_Mondo_095
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 107-115 | DiseaseOrPhenotypicFeature | denotes | Aniridia | 0019172 |
| T2 | 117-119 | DiseaseOrPhenotypicFeature | denotes | AN | 0011727|0019172 |
| T4 | 311-325 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | 0011414 |
| T5 | 441-443 | DiseaseOrPhenotypicFeature | denotes | AN | 0011727|0019172 |
| T7 | 445-461 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris | 0020356 |
| T8 | 1035-1037 | DiseaseOrPhenotypicFeature | denotes | AN | 0011727|0019172 |
| T10 | 1039-1055 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris | 0020356 |
| T11 | 1119-1133 | DiseaseOrPhenotypicFeature | denotes | peters anomaly | 0011414 |
| T12 | 1309-1311 | DiseaseOrPhenotypicFeature | denotes | AN | 0011727|0019172 |
| T14 | 1512-1526 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | 0011414 |
| T15 | 1705-1707 | DiseaseOrPhenotypicFeature | denotes | AN | 0011727|0019172 |
| T17 | 1795-1811 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris | 0020356 |
LitCoin-MeSH-Disease-2
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 107-115 | DiseaseOrPhenotypicFeature | denotes | Aniridia | D015783 |
| T2 | 131-160 | DiseaseOrPhenotypicFeature | denotes | congenital panocular disorder | DISEASE |
| T3 | 270-300 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformations | DISEASE |
| T4 | 311-325 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | C537884 |
| T5 | 445-473 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris and choroid | DISEASE |
| T6 | 478-508 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformations | DISEASE |
| T7 | 1039-1068 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris and choroids | DISEASE |
| T8 | 1078-1108 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformations | DISEASE |
| T9 | 1119-1133 | DiseaseOrPhenotypicFeature | denotes | peters anomaly | C537884 |
| T10 | 1384-1413 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformation | DISEASE |
| T11 | 1512-1526 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | C537884 |
| T12 | 1795-1823 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris and choroid | DISEASE |
LitCoin-MONDO_bioort2019
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T1 | 107-115 | DiseaseOrPhenotypicFeature | denotes | Aniridia | D015783 |
| T2 | 117-119 | DiseaseOrPhenotypicFeature | denotes | AN | DISEASE|D015783 |
| T4 | 131-160 | DiseaseOrPhenotypicFeature | denotes | congenital panocular disorder | DISEASE |
| T5 | 270-300 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformations | DISEASE |
| T6 | 311-325 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | C537884 |
| T7 | 441-443 | DiseaseOrPhenotypicFeature | denotes | AN | DISEASE|D015783 |
| T9 | 445-473 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris and choroid | DISEASE |
| T10 | 478-508 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformations | DISEASE |
| T11 | 1035-1037 | DiseaseOrPhenotypicFeature | denotes | AN | DISEASE|D015783 |
| T13 | 1039-1068 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris and choroids | DISEASE |
| T14 | 1078-1108 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformations | DISEASE |
| T15 | 1119-1133 | DiseaseOrPhenotypicFeature | denotes | peters anomaly | C537884 |
| T16 | 1309-1311 | DiseaseOrPhenotypicFeature | denotes | AN | DISEASE|D015783 |
| T18 | 1384-1413 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformation | DISEASE |
| T19 | 1512-1526 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | C537884 |
| T20 | 1705-1707 | DiseaseOrPhenotypicFeature | denotes | AN | DISEASE|D015783 |
| T22 | 1795-1823 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris and choroid | DISEASE |
LitCoin-NCBITaxon-2
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 88-96 | OrganismTaxon | denotes | patients |
| T2 | 457-461 | OrganismTaxon | denotes | iris |
| T3 | 571-579 | OrganismTaxon | denotes | patients |
| T4 | 962-970 | OrganismTaxon | denotes | patients |
| T5 | 1051-1055 | OrganismTaxon | denotes | iris |
| T6 | 1293-1301 | OrganismTaxon | denotes | patients |
| T7 | 1688-1695 | OrganismTaxon | denotes | patient |
| T8 | 1807-1811 | OrganismTaxon | denotes | iris |
LitCoin-training-merged
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T5 | 1483-1487 | GeneOrGeneProduct | denotes | PAX6 | |
| T4 | 1457-1468 | GeneOrGeneProduct | denotes | homeodomain | |
| T3 | 219-223 | GeneOrGeneProduct | denotes | PAX6 | |
| T2 | 192-218 | GeneOrGeneProduct | denotes | paired box homeotic gene 6 | |
| T1 | 27-31 | GeneOrGeneProduct | denotes | PAX6 | |
| T22 | 1795-1823 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris and choroid | DISEASE |
| T20 | 1705-1707 | DiseaseOrPhenotypicFeature | denotes | AN | D015783|DISEASE |
| T19 | 1512-1526 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | C537884 |
| T18 | 1384-1413 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformation | DISEASE |
| T16 | 1309-1311 | DiseaseOrPhenotypicFeature | denotes | AN | D015783|DISEASE |
| T15 | 1119-1133 | DiseaseOrPhenotypicFeature | denotes | peters anomaly | C537884 |
| T14 | 1078-1108 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformations | DISEASE |
| T13 | 1039-1068 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris and choroids | DISEASE |
| T11 | 1035-1037 | DiseaseOrPhenotypicFeature | denotes | AN | D015783|DISEASE |
| T10 | 478-508 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformations | DISEASE |
| T9 | 445-473 | DiseaseOrPhenotypicFeature | denotes | coloboma of iris and choroid | DISEASE |
| T7 | 441-443 | DiseaseOrPhenotypicFeature | denotes | AN | D015783|DISEASE |
| T6 | 311-325 | DiseaseOrPhenotypicFeature | denotes | Peters anomaly | C537884 |
| T36673 | 270-300 | DiseaseOrPhenotypicFeature | denotes | anterior segment malformations | DISEASE |
| T81980 | 131-160 | DiseaseOrPhenotypicFeature | denotes | congenital panocular disorder | DISEASE |
| T92192 | 117-119 | DiseaseOrPhenotypicFeature | denotes | AN | D015783|DISEASE |
| T88060 | 107-115 | DiseaseOrPhenotypicFeature | denotes | Aniridia | D015783 |
| T8 | 1807-1811 | OrganismTaxon | denotes | iris | |
| T91100 | 1688-1695 | OrganismTaxon | denotes | patient | |
| T79713 | 1293-1301 | OrganismTaxon | denotes | patients | |
| T29278 | 1051-1055 | OrganismTaxon | denotes | iris | |
| T96730 | 962-970 | OrganismTaxon | denotes | patients | |
| T73635 | 571-579 | OrganismTaxon | denotes | patients | |
| T28306 | 457-461 | OrganismTaxon | denotes | iris | |
| T35146 | 88-96 | OrganismTaxon | denotes | patients | |
| T91550 | 1434-1441 | SequenceVariant | denotes | p.S216P | |
| T87762 | 1355-1362 | SequenceVariant | denotes | p.S216P | |
| T64673 | 1345-1353 | SequenceVariant | denotes | c.643T>C | |
| T18181 | 1257-1268 | SequenceVariant | denotes | p.Ser119fsX | |
| T30775 | 1245-1255 | SequenceVariant | denotes | c.357-3C>G |
DisGeNET
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T0 | 192-218 | gene:5080 | denotes | paired box homeotic gene 6 |
| T1 | 107-115 | disease:C0003076 | denotes | Aniridia |
| T2 | 192-218 | gene:5080 | denotes | paired box homeotic gene 6 |
| T3 | 117-119 | disease:C0003076 | denotes | AN |
| T4 | 219-223 | gene:5080 | denotes | PAX6 |
| T5 | 107-115 | disease:C0003076 | denotes | Aniridia |
| T6 | 219-223 | gene:5080 | denotes | PAX6 |
| T7 | 117-119 | disease:C0003076 | denotes | AN |
| R1 | T0 | T1 | associated_with | paired box homeotic gene 6,Aniridia |
| R2 | T2 | T3 | associated_with | paired box homeotic gene 6,AN |
| R3 | T4 | T5 | associated_with | PAX6,Aniridia |
| R4 | T6 | T7 | associated_with | PAX6,AN |
Allie
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| SS1_21904390_2_0 | 192-218 | expanded | denotes | paired box homeotic gene 6 |
| SS2_21904390_2_0 | 219-223 | abbr | denotes | PAX6 |
| SS1_21904390_2_1 | 107-115 | expanded | denotes | Aniridia |
| SS2_21904390_2_1 | 117-119 | abbr | denotes | AN |
| SS1_21904390_9_0 | 827-875 | expanded | denotes | Multiplex ligation-dependent probe amplification |
| SS2_21904390_9_0 | 877-881 | abbr | denotes | MLPA |
| AE1_21904390_2_0 | SS1_21904390_2_0 | SS2_21904390_2_0 | abbreviatedTo | paired box homeotic gene 6,PAX6 |
| AE1_21904390_2_1 | SS1_21904390_2_1 | SS2_21904390_2_1 | abbreviatedTo | Aniridia,AN |
| AE1_21904390_9_0 | SS1_21904390_9_0 | SS2_21904390_9_0 | abbreviatedTo | Multiplex ligation-dependent probe amplification,MLPA |
PubmedHPO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 107-115 | HP_0000526 | denotes | Aniridia |
| T2 | 311-325 | HP_0000659 | denotes | Peters anomaly |
| T3 | 445-453 | HP_0000589 | denotes | coloboma |
| T4 | 445-461 | HP_0000612 | denotes | coloboma of iris |
DisGeNET5_gene_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 21904390-1#85#111#gene5080 | 192-218 | gene5080 | denotes | paired box homeotic gene 6 |
| 21904390-1#112#116#gene5080 | 219-223 | gene5080 | denotes | PAX6 |
| 21904390-1#0#8#diseaseC0003076 | 107-115 | diseaseC0003076 | denotes | Aniridia |
| 21904390-1#10#12#diseaseC0003076 | 117-119 | diseaseC0003076 | denotes | AN |
| 21904390-11#62#66#gene5080 | 1483-1487 | gene5080 | denotes | PAX6 |
| 21904390-11#91#105#diseaseC0344559 | 1512-1526 | diseaseC0344559 | denotes | Peters anomaly |
| 85#111#gene50800#8#diseaseC0003076 | 21904390-1#85#111#gene5080 | 21904390-1#0#8#diseaseC0003076 | associated_with | paired box homeotic gene 6,Aniridia |
| 85#111#gene508010#12#diseaseC0003076 | 21904390-1#85#111#gene5080 | 21904390-1#10#12#diseaseC0003076 | associated_with | paired box homeotic gene 6,AN |
| 112#116#gene50800#8#diseaseC0003076 | 21904390-1#112#116#gene5080 | 21904390-1#0#8#diseaseC0003076 | associated_with | PAX6,Aniridia |
| 112#116#gene508010#12#diseaseC0003076 | 21904390-1#112#116#gene5080 | 21904390-1#10#12#diseaseC0003076 | associated_with | PAX6,AN |
| 62#66#gene508091#105#diseaseC0344559 | 21904390-11#62#66#gene5080 | 21904390-11#91#105#diseaseC0344559 | associated_with | PAX6,Peters anomaly |
tmVarCorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1245-1255 | DNAMutation:c|SUB|C|357-3|G | denotes | c.357-3C>G |
| T2 | 1257-1268 | ProteinMutation:p|FS|S|119|| | denotes | p.Ser119fsX |
| T3 | 1345-1353 | DNAMutation:c|SUB|T|643|C | denotes | c.643T>C |
| T4 | 1355-1362 | ProteinMutation:p|SUB|S|216|P | denotes | p.S216P |
| T5 | 1434-1441 | ProteinMutation:p|SUB|S|216|P | denotes | p.S216P |