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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-210 Sentence denotes Genotype rs8099917 near the IL28B gene and amino acid substitution at position 70 in the core region of the hepatitis C virus are determinants of serum apolipoprotein B-100 concentration in chronic hepatitis C.
T2 211-307 Sentence denotes The life cycle of the hepatitis C virus (HCV) is closely related to host lipoprotein metabolism.
T3 308-698 Sentence denotes Serum levels of lipid are associated with the response to pegylated interferon plus ribavirin (PEG-IFN/RBV) therapy, while single nucleotide polymorphisms (SNPs) around the human interleukin 28B (IL28B) gene locus and amino acid substitutions in the core region of the HCV have been reported to affect the efficacy of PEG-IFN/RBV therapy in chronic hepatitis with HCV genotype 1b infection.
T4 699-950 Sentence denotes The aim of this study was to elucidate the relationship between serum lipid and factors that are able to predict the efficacy of PEG-IFN/RB therapy, with specific focus on apolipoprotein B-100 (apoB-100) in 148 subjects with chronic HCV G1b infection.
T5 951-1199 Sentence denotes Our results demonstrated that both the aa 70 substitution in the core region of the HCV and the rs8099917 SNP located proximal to the IL28B were independent factors in determining serum apoB-100 and low-density lipoprotein (LDL) cholesterol levels.
T6 1200-1350 Sentence denotes A significant association was noted between higher levels of apoB-100 (P = 1.1 × 10(-3)) and LDL cholesterol (P = 0.02) and the subjects having Arg70.
T7 1351-1545 Sentence denotes A significant association was also observed between subjects carrying the rs8099917 TT responder genotype and higher levels of apoB-100 (P = 6.4 × 10(-3)) and LDL cholesterol (P = 4.2 × 10(-3)).
T8 1546-1729 Sentence denotes Our results suggest that apoB-100 and LDL cholesterol are markers of impaired cellular lipoprotein pathways and/or host endogenous interferon response to HCV in chronic HCV infection.
T9 1730-1934 Sentence denotes In particular, serum apoB-100 concentration might be an informative marker for judging changes in HCV-associated intracellular lipoprotein metabolism in patients carrying the rs8099917 responder genotype.

LitCoin-entities-OrganismTaxon-PD

Id Subject Object Predicate Lexical cue db_id
T1 108-125 OrganismTaxon denotes hepatitis C virus NCBItxid:11103
T2 233-250 OrganismTaxon denotes hepatitis C virus NCBItxid:11103
T3 252-255 OrganismTaxon denotes HCV NCBItxid:11103
T4 481-486 OrganismTaxon denotes human NCBItxid:9606
T5 577-580 OrganismTaxon denotes HCV NCBItxid:11103
T6 672-675 OrganismTaxon denotes HCV NCBItxid:11103
T7 932-935 OrganismTaxon denotes HCV NCBItxid:11103
T8 1035-1038 OrganismTaxon denotes HCV NCBItxid:11103
T9 1700-1703 OrganismTaxon denotes HCV NCBItxid:11103
T10 1715-1718 OrganismTaxon denotes HCV NCBItxid:11103
T11 1828-1831 OrganismTaxon denotes HCV NCBItxid:11103

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
8806 9-18 SequenceVariant denotes rs8099917 DBSNP:rs8099917
8807 28-33 GeneOrGeneProduct denotes IL28B NCBIGene:282617
8808 108-125 OrganismTaxon denotes hepatitis C virus NCBITaxon:11103
8809 152-172 GeneOrGeneProduct denotes apolipoprotein B-100 NCBIGene:338
8810 190-209 DiseaseOrPhenotypicFeature denotes chronic hepatitis C MESH:D019698
8811 233-250 OrganismTaxon denotes hepatitis C virus NCBITaxon:11103
8812 252-255 OrganismTaxon denotes HCV NCBITaxon:11103
8813 324-329 ChemicalEntity denotes lipid MESH:D008055
8814 366-386 GeneOrGeneProduct denotes pegylated interferon NCBIGene:3439
8815 392-401 ChemicalEntity denotes ribavirin MESH:D012254
8816 403-410 GeneOrGeneProduct denotes PEG-IFN NCBIGene:3439
8817 411-414 ChemicalEntity denotes RBV MESH:D012254
8818 481-486 OrganismTaxon denotes human NCBITaxon:9606
8819 487-502 GeneOrGeneProduct denotes interleukin 28B NCBIGene:282617
8820 504-509 GeneOrGeneProduct denotes IL28B NCBIGene:282617
8821 577-580 OrganismTaxon denotes HCV NCBITaxon:11103
8822 626-633 GeneOrGeneProduct denotes PEG-IFN NCBIGene:3439
8823 634-637 ChemicalEntity denotes RBV MESH:D012254
8824 649-666 DiseaseOrPhenotypicFeature denotes chronic hepatitis MESH:D006521
8825 672-697 DiseaseOrPhenotypicFeature denotes HCV genotype 1b infection MESH:D006526
8826 769-774 ChemicalEntity denotes lipid MESH:D008055
8827 828-835 GeneOrGeneProduct denotes PEG-IFN NCBIGene:3439
8828 836-838 ChemicalEntity denotes RB MESH:D012254
8829 871-891 GeneOrGeneProduct denotes apolipoprotein B-100 NCBIGene:338
8830 893-901 GeneOrGeneProduct denotes apoB-100 NCBIGene:338
8831 932-949 DiseaseOrPhenotypicFeature denotes HCV G1b infection MESH:D006526
8832 1035-1038 OrganismTaxon denotes HCV NCBITaxon:11103
8833 1047-1056 SequenceVariant denotes rs8099917 DBSNP:rs8099917
8834 1085-1090 GeneOrGeneProduct denotes IL28B NCBIGene:282617
8835 1137-1145 GeneOrGeneProduct denotes apoB-100 NCBIGene:338
8836 1150-1191 ChemicalEntity denotes low-density lipoprotein (LDL) cholesterol MESH:D008078
8837 1261-1269 GeneOrGeneProduct denotes apoB-100 NCBIGene:338
8838 1293-1308 ChemicalEntity denotes LDL cholesterol MESH:D008078
8839 1344-1349 SequenceVariant denotes Arg70 p|Allele|R|70
8840 1425-1434 SequenceVariant denotes rs8099917 DBSNP:rs8099917
8841 1478-1486 GeneOrGeneProduct denotes apoB-100 NCBIGene:338
8842 1510-1525 ChemicalEntity denotes LDL cholesterol MESH:D008078
8843 1571-1579 GeneOrGeneProduct denotes apoB-100 NCBIGene:338
8844 1584-1599 ChemicalEntity denotes LDL cholesterol MESH:D008078
8845 1700-1703 OrganismTaxon denotes HCV NCBITaxon:11103
8846 1715-1728 DiseaseOrPhenotypicFeature denotes HCV infection MESH:D006526
8847 1751-1759 GeneOrGeneProduct denotes apoB-100 NCBIGene:338
8848 1828-1831 OrganismTaxon denotes HCV NCBITaxon:11103
8849 1883-1891 OrganismTaxon denotes patients NCBITaxon:9606
8850 1905-1914 SequenceVariant denotes rs8099917 DBSNP:rs8099917

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 108-117 DiseaseOrPhenotypicFeature denotes hepatitis 0002251
T2 198-207 DiseaseOrPhenotypicFeature denotes hepatitis 0002251
T3 233-242 DiseaseOrPhenotypicFeature denotes hepatitis 0002251
T4 657-666 DiseaseOrPhenotypicFeature denotes hepatitis 0002251

LitCoin-SeqVar

Id Subject Object Predicate Lexical cue
T1 9-18 SequenceVariant denotes rs8099917
T2 499-502 SequenceVariant denotes 28B
T3 936-939 SequenceVariant denotes G1b
T4 1047-1056 SequenceVariant denotes rs8099917
T5 1425-1434 SequenceVariant denotes rs8099917
T6 1905-1914 SequenceVariant denotes rs8099917

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 28-33 GeneOrGeneProduct denotes IL28B
T2 43-53 GeneOrGeneProduct denotes amino acid
T3 89-93 GeneOrGeneProduct denotes core
T4 130-142 GeneOrGeneProduct denotes determinants
T5 152-172 GeneOrGeneProduct denotes apolipoprotein B-100
T6 220-225 GeneOrGeneProduct denotes cycle
T7 284-295 GeneOrGeneProduct denotes lipoprotein
T8 376-386 GeneOrGeneProduct denotes interferon
T9 407-410 GeneOrGeneProduct denotes IFN
T10 487-502 GeneOrGeneProduct denotes interleukin 28B
T11 504-509 GeneOrGeneProduct denotes IL28B
T12 526-536 GeneOrGeneProduct denotes amino acid
T13 558-562 GeneOrGeneProduct denotes core
T14 630-633 GeneOrGeneProduct denotes IFN
T30 1488-1495 GeneOrGeneProduct denotes P = 6.4
T15 779-786 GeneOrGeneProduct denotes factors
T16 804-811 GeneOrGeneProduct denotes predict
T17 832-835 GeneOrGeneProduct denotes IFN
T18 871-891 GeneOrGeneProduct denotes apolipoprotein B-100
T19 893-901 GeneOrGeneProduct denotes apoB-100
T20 1016-1020 GeneOrGeneProduct denotes core
T21 1085-1090 GeneOrGeneProduct denotes IL28B
T22 1108-1115 GeneOrGeneProduct denotes factors
T23 1119-1130 GeneOrGeneProduct denotes determining
T24 1137-1145 GeneOrGeneProduct denotes apoB-100
T25 1162-1173 GeneOrGeneProduct denotes lipoprotein
T26 1174-1191 GeneOrGeneProduct denotes (LDL) cholesterol
T27 1261-1269 GeneOrGeneProduct denotes apoB-100
T28 1293-1308 GeneOrGeneProduct denotes LDL cholesterol
T29 1478-1486 GeneOrGeneProduct denotes apoB-100
T31 1510-1525 GeneOrGeneProduct denotes LDL cholesterol
T32 1527-1534 GeneOrGeneProduct denotes P = 4.2
T33 1571-1579 GeneOrGeneProduct denotes apoB-100
T34 1584-1599 GeneOrGeneProduct denotes LDL cholesterol
T35 1633-1644 GeneOrGeneProduct denotes lipoprotein
T36 1677-1687 GeneOrGeneProduct denotes interferon
T37 1751-1759 GeneOrGeneProduct denotes apoB-100
T38 1857-1868 GeneOrGeneProduct denotes lipoprotein

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 28-33 GeneOrGeneProduct denotes IL28B
T2 43-53 GeneOrGeneProduct denotes amino acid
T3 89-93 GeneOrGeneProduct denotes core
T4 152-172 GeneOrGeneProduct denotes apolipoprotein B-100
T5 220-225 GeneOrGeneProduct denotes cycle
T6 284-295 GeneOrGeneProduct denotes lipoprotein
T7 376-386 GeneOrGeneProduct denotes interferon
T8 487-502 GeneOrGeneProduct denotes interleukin 28B
T9 504-509 GeneOrGeneProduct denotes IL28B
T10 526-536 GeneOrGeneProduct denotes amino acid
T11 558-562 GeneOrGeneProduct denotes core
T12 871-891 GeneOrGeneProduct denotes apolipoprotein B-100
T13 893-901 GeneOrGeneProduct denotes apoB-100
T14 1016-1020 GeneOrGeneProduct denotes core
T15 1085-1090 GeneOrGeneProduct denotes IL28B
T16 1137-1145 GeneOrGeneProduct denotes apoB-100
T17 1162-1173 GeneOrGeneProduct denotes lipoprotein
T18 1174-1191 GeneOrGeneProduct denotes (LDL) cholesterol
T19 1261-1269 GeneOrGeneProduct denotes apoB-100
T20 1293-1308 GeneOrGeneProduct denotes LDL cholesterol
T21 1478-1486 GeneOrGeneProduct denotes apoB-100
T22 1510-1525 GeneOrGeneProduct denotes LDL cholesterol
T23 1527-1534 GeneOrGeneProduct denotes P = 4.2
T24 1571-1579 GeneOrGeneProduct denotes apoB-100
T25 1584-1599 GeneOrGeneProduct denotes LDL cholesterol
T26 1633-1644 GeneOrGeneProduct denotes lipoprotein
T27 1677-1687 GeneOrGeneProduct denotes interferon
T28 1751-1759 GeneOrGeneProduct denotes apoB-100
T29 1857-1868 GeneOrGeneProduct denotes lipoprotein

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 108-119 DiseaseOrPhenotypicFeature denotes hepatitis C D006526
T2 190-209 DiseaseOrPhenotypicFeature denotes chronic hepatitis C D019698
T3 233-244 DiseaseOrPhenotypicFeature denotes hepatitis C D006526
T4 649-666 DiseaseOrPhenotypicFeature denotes chronic hepatitis D006521
T5 688-697 DiseaseOrPhenotypicFeature denotes infection D007239
T6 940-949 DiseaseOrPhenotypicFeature denotes infection D007239
T7 1719-1728 DiseaseOrPhenotypicFeature denotes infection D007239

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 28-33 GeneOrGeneProduct denotes IL28B
T2 152-172 GeneOrGeneProduct denotes apolipoprotein B-100
T3 284-295 GeneOrGeneProduct denotes lipoprotein
T4 487-502 GeneOrGeneProduct denotes interleukin 28B
T5 504-509 GeneOrGeneProduct denotes IL28B
T6 871-891 GeneOrGeneProduct denotes apolipoprotein B-100
T7 893-901 GeneOrGeneProduct denotes apoB-100
T8 1085-1090 GeneOrGeneProduct denotes IL28B
T9 1137-1145 GeneOrGeneProduct denotes apoB-100
T10 1162-1173 GeneOrGeneProduct denotes lipoprotein
T11 1180-1198 GeneOrGeneProduct denotes cholesterol levels
T12 1261-1269 GeneOrGeneProduct denotes apoB-100
T13 1478-1486 GeneOrGeneProduct denotes apoB-100
T14 1527-1534 GeneOrGeneProduct denotes P = 4.2
T15 1571-1579 GeneOrGeneProduct denotes apoB-100
T16 1633-1644 GeneOrGeneProduct denotes lipoprotein
T17 1751-1759 GeneOrGeneProduct denotes apoB-100
T18 1857-1868 GeneOrGeneProduct denotes lipoprotein

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 108-117 DiseaseOrPhenotypicFeature denotes hepatitis 0002251
T2 190-209 DiseaseOrPhenotypicFeature denotes chronic hepatitis C 0005354
T3 233-242 DiseaseOrPhenotypicFeature denotes hepatitis 0002251
T4 657-666 DiseaseOrPhenotypicFeature denotes hepatitis 0002251
T5 688-697 DiseaseOrPhenotypicFeature denotes infection 0005550
T6 836-838 DiseaseOrPhenotypicFeature denotes RB 0008380
T7 940-949 DiseaseOrPhenotypicFeature denotes infection 0005550
T8 1719-1728 DiseaseOrPhenotypicFeature denotes infection 0005550

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 108-119 DiseaseOrPhenotypicFeature denotes hepatitis C D006526
T2 190-209 DiseaseOrPhenotypicFeature denotes chronic hepatitis C D019698
T3 233-244 DiseaseOrPhenotypicFeature denotes hepatitis C D006526
T4 649-666 DiseaseOrPhenotypicFeature denotes chronic hepatitis D006521
T5 672-697 DiseaseOrPhenotypicFeature denotes HCV genotype 1b infection DISEASE
T6 940-949 DiseaseOrPhenotypicFeature denotes infection D007239
T7 1719-1728 DiseaseOrPhenotypicFeature denotes infection D007239

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 108-119 DiseaseOrPhenotypicFeature denotes hepatitis C D006526
T2 190-209 DiseaseOrPhenotypicFeature denotes chronic hepatitis C D019698
T3 233-244 DiseaseOrPhenotypicFeature denotes hepatitis C D006526
T4 649-666 DiseaseOrPhenotypicFeature denotes chronic hepatitis D006521
T5 672-697 DiseaseOrPhenotypicFeature denotes HCV genotype 1b infection DISEASE
T6 1715-1728 DiseaseOrPhenotypicFeature denotes HCV infection Eisukeadded

LitCoin-NCBITaxon-2

Id Subject Object Predicate Lexical cue
T1 108-125 OrganismTaxon denotes hepatitis C virus
T2 233-250 OrganismTaxon denotes hepatitis C virus
T3 252-255 OrganismTaxon denotes HCV
T4 481-486 OrganismTaxon denotes human
T5 577-580 OrganismTaxon denotes HCV
T6 672-675 OrganismTaxon denotes HCV
T7 932-935 OrganismTaxon denotes HCV
T8 1035-1038 OrganismTaxon denotes HCV
T9 1700-1703 OrganismTaxon denotes HCV
T10 1715-1718 OrganismTaxon denotes HCV
T11 1828-1831 OrganismTaxon denotes HCV
T12 1883-1891 OrganismTaxon denotes patients

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 152-166 ChemicalEntity denotes apolipoprotein http://purl.obolibrary.org/obo/CHEBI_39015
T2 392-401 ChemicalEntity denotes ribavirin http://purl.obolibrary.org/obo/CHEBI_63580
T3 403-406 ChemicalEntity denotes PEG http://purl.obolibrary.org/obo/CHEBI_46793
T4 411-414 ChemicalEntity denotes RBV http://purl.obolibrary.org/obo/CHEBI_63580
T5 626-629 ChemicalEntity denotes PEG http://purl.obolibrary.org/obo/CHEBI_46793
T6 634-637 ChemicalEntity denotes RBV http://purl.obolibrary.org/obo/CHEBI_63580
T7 828-831 ChemicalEntity denotes PEG http://purl.obolibrary.org/obo/CHEBI_46793
T8 871-885 ChemicalEntity denotes apolipoprotein http://purl.obolibrary.org/obo/CHEBI_39015
T9 1150-1173 ChemicalEntity denotes low-density lipoprotein http://purl.obolibrary.org/obo/CHEBI_39026
T10 1174-1191 ChemicalEntity denotes (LDL) cholesterol http://purl.obolibrary.org/obo/CHEBI_47774
T11 1175-1178 ChemicalEntity denotes LDL http://purl.obolibrary.org/obo/CHEBI_39026
T12 1293-1308 ChemicalEntity denotes LDL cholesterol http://purl.obolibrary.org/obo/CHEBI_47774
T13 1293-1296 ChemicalEntity denotes LDL http://purl.obolibrary.org/obo/CHEBI_39026
T14 1510-1525 ChemicalEntity denotes LDL cholesterol http://purl.obolibrary.org/obo/CHEBI_47774
T15 1510-1513 ChemicalEntity denotes LDL http://purl.obolibrary.org/obo/CHEBI_39026
T16 1584-1599 ChemicalEntity denotes LDL cholesterol http://purl.obolibrary.org/obo/CHEBI_47774
T17 1584-1587 ChemicalEntity denotes LDL http://purl.obolibrary.org/obo/CHEBI_39026

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T17 1584-1587 ChemicalEntity denotes LDL http://purl.obolibrary.org/obo/CHEBI_39026
T16 1584-1599 ChemicalEntity denotes LDL cholesterol http://purl.obolibrary.org/obo/CHEBI_47774
T15 1510-1513 ChemicalEntity denotes LDL http://purl.obolibrary.org/obo/CHEBI_39026
T14 1510-1525 ChemicalEntity denotes LDL cholesterol http://purl.obolibrary.org/obo/CHEBI_47774
T13 1293-1296 ChemicalEntity denotes LDL http://purl.obolibrary.org/obo/CHEBI_39026
T12 1293-1308 ChemicalEntity denotes LDL cholesterol http://purl.obolibrary.org/obo/CHEBI_47774
T11 1175-1178 ChemicalEntity denotes LDL http://purl.obolibrary.org/obo/CHEBI_39026
T10 1174-1191 ChemicalEntity denotes (LDL) cholesterol http://purl.obolibrary.org/obo/CHEBI_47774
T9 1150-1173 ChemicalEntity denotes low-density lipoprotein http://purl.obolibrary.org/obo/CHEBI_39026
T8 871-885 ChemicalEntity denotes apolipoprotein http://purl.obolibrary.org/obo/CHEBI_39015
T7 828-831 ChemicalEntity denotes PEG http://purl.obolibrary.org/obo/CHEBI_46793
T6 634-637 ChemicalEntity denotes RBV http://purl.obolibrary.org/obo/CHEBI_63580
T5 626-629 ChemicalEntity denotes PEG http://purl.obolibrary.org/obo/CHEBI_46793
T4 411-414 ChemicalEntity denotes RBV http://purl.obolibrary.org/obo/CHEBI_63580
T3 403-406 ChemicalEntity denotes PEG http://purl.obolibrary.org/obo/CHEBI_46793
T2 392-401 ChemicalEntity denotes ribavirin http://purl.obolibrary.org/obo/CHEBI_63580
T1 152-166 ChemicalEntity denotes apolipoprotein http://purl.obolibrary.org/obo/CHEBI_39015
T18 1857-1868 GeneOrGeneProduct denotes lipoprotein
T22199 1751-1759 GeneOrGeneProduct denotes apoB-100
T15723 1633-1644 GeneOrGeneProduct denotes lipoprotein
T15149 1571-1579 GeneOrGeneProduct denotes apoB-100
T35451 1527-1534 GeneOrGeneProduct denotes P = 4.2
T23937 1478-1486 GeneOrGeneProduct denotes apoB-100
T40856 1261-1269 GeneOrGeneProduct denotes apoB-100
T24411 1180-1198 GeneOrGeneProduct denotes cholesterol levels
T84777 1162-1173 GeneOrGeneProduct denotes lipoprotein
T16379 1137-1145 GeneOrGeneProduct denotes apoB-100
T34657 1085-1090 GeneOrGeneProduct denotes IL28B
T88154 893-901 GeneOrGeneProduct denotes apoB-100
T31736 871-891 GeneOrGeneProduct denotes apolipoprotein B-100
T80339 504-509 GeneOrGeneProduct denotes IL28B
T91807 487-502 GeneOrGeneProduct denotes interleukin 28B
T33277 284-295 GeneOrGeneProduct denotes lipoprotein
T62883 152-172 GeneOrGeneProduct denotes apolipoprotein B-100
T63580 28-33 GeneOrGeneProduct denotes IL28B
T9577 1715-1728 DiseaseOrPhenotypicFeature denotes HCV infection Eisukeadded
T28894 672-697 DiseaseOrPhenotypicFeature denotes HCV genotype 1b infection DISEASE
T23498 649-666 DiseaseOrPhenotypicFeature denotes chronic hepatitis D006521
T63282 233-244 DiseaseOrPhenotypicFeature denotes hepatitis C D006526
T12254 190-209 DiseaseOrPhenotypicFeature denotes chronic hepatitis C D019698
T13609 108-119 DiseaseOrPhenotypicFeature denotes hepatitis C D006526
T65509 1883-1891 OrganismTaxon denotes patients
T81094 1828-1831 OrganismTaxon denotes HCV
T64540 1715-1718 OrganismTaxon denotes HCV
T47786 1700-1703 OrganismTaxon denotes HCV
T3196 1035-1038 OrganismTaxon denotes HCV
T22731 932-935 OrganismTaxon denotes HCV
T14093 672-675 OrganismTaxon denotes HCV
T74082 577-580 OrganismTaxon denotes HCV
T59976 481-486 OrganismTaxon denotes human
T53949 252-255 OrganismTaxon denotes HCV
T98731 233-250 OrganismTaxon denotes hepatitis C virus
T43794 108-125 OrganismTaxon denotes hepatitis C virus
T80018 1905-1914 SequenceVariant denotes rs8099917
T88695 1425-1434 SequenceVariant denotes rs8099917
T36791 1047-1056 SequenceVariant denotes rs8099917
T16969 936-939 SequenceVariant denotes G1b
T95129 499-502 SequenceVariant denotes 28B
T24151 9-18 SequenceVariant denotes rs8099917

DisGeNET

Id Subject Object Predicate Lexical cue
T0 28-33 gene:282617 denotes IL28B
T1 108-119 disease:C0019196 denotes hepatitis C
T2 28-33 gene:282617 denotes IL28B
T3 190-209 disease:C0524910 denotes chronic hepatitis C
T4 152-172 gene:338 denotes apolipoprotein B-100
T5 108-119 disease:C0019196 denotes hepatitis C
T6 152-172 gene:338 denotes apolipoprotein B-100
T7 190-209 disease:C0524910 denotes chronic hepatitis C
T8 487-502 gene:282617 denotes interleukin 28B
T9 649-666 disease:C0019189 denotes chronic hepatitis
T10 504-509 gene:282617 denotes IL28B
T11 649-666 disease:C0019189 denotes chronic hepatitis
T12 626-629 gene:5047 denotes PEG
T13 649-666 disease:C0019189 denotes chronic hepatitis
T14 630-633 gene:3439 denotes IFN
T15 649-666 disease:C0019189 denotes chronic hepatitis
T16 630-633 gene:3447 denotes IFN
T17 649-666 disease:C0019189 denotes chronic hepatitis
R1 T0 T1 associated_with IL28B,hepatitis C
R2 T2 T3 associated_with IL28B,chronic hepatitis C
R3 T4 T5 associated_with apolipoprotein B-100,hepatitis C
R4 T6 T7 associated_with apolipoprotein B-100,chronic hepatitis C
R5 T8 T9 associated_with interleukin 28B,chronic hepatitis
R6 T10 T11 associated_with IL28B,chronic hepatitis
R7 T12 T13 associated_with PEG,chronic hepatitis
R8 T14 T15 associated_with IFN,chronic hepatitis
R9 T16 T17 associated_with IFN,chronic hepatitis

Allie

Id Subject Object Predicate Lexical cue
SS1_21879313_1_0 233-250 expanded denotes hepatitis C virus
SS2_21879313_1_0 252-255 abbr denotes HCV
SS1_21879313_2_0 431-462 expanded denotes single nucleotide polymorphisms
SS2_21879313_2_0 464-468 abbr denotes SNPs
SS1_21879313_2_1 487-502 expanded denotes interleukin 28B
SS2_21879313_2_1 504-509 abbr denotes IL28B
SS1_21879313_3_0 871-891 expanded denotes apolipoprotein B-100
SS2_21879313_3_0 893-901 abbr denotes apoB-100
SS1_21879313_4_0 1150-1173 expanded denotes low-density lipoprotein
SS2_21879313_4_0 1175-1178 abbr denotes LDL
AE1_21879313_1_0 SS1_21879313_1_0 SS2_21879313_1_0 abbreviatedTo hepatitis C virus,HCV
AE1_21879313_2_0 SS1_21879313_2_0 SS2_21879313_2_0 abbreviatedTo single nucleotide polymorphisms,SNPs
AE1_21879313_2_1 SS1_21879313_2_1 SS2_21879313_2_1 abbreviatedTo interleukin 28B,IL28B
AE1_21879313_3_0 SS1_21879313_3_0 SS2_21879313_3_0 abbreviatedTo apolipoprotein B-100,apoB-100
AE1_21879313_4_0 SS1_21879313_4_0 SS2_21879313_4_0 abbreviatedTo low-density lipoprotein,LDL

DisGeNET5_variant_disease

Id Subject Object Predicate Lexical cue
21879313-0#9#18#geners8099917 9-18 geners8099917 denotes rs8099917
21879313-0#108#119#diseaseC0019196 108-119 diseaseC0019196 denotes hepatitis C
21879313-0#190#209#diseaseC0524910 190-209 diseaseC0524910 denotes chronic hepatitis C
9#18#geners8099917108#119#diseaseC0019196 21879313-0#9#18#geners8099917 21879313-0#108#119#diseaseC0019196 associated_with rs8099917,hepatitis C
9#18#geners8099917190#209#diseaseC0524910 21879313-0#9#18#geners8099917 21879313-0#190#209#diseaseC0524910 associated_with rs8099917,chronic hepatitis C

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
21879313-0#28#33#gene282617 28-33 gene282617 denotes IL28B
21879313-0#152#172#gene338 152-172 gene338 denotes apolipoprotein B-100
21879313-0#108#119#diseaseC0019196 108-119 diseaseC0019196 denotes hepatitis C
21879313-0#190#209#diseaseC0524910 190-209 diseaseC0524910 denotes chronic hepatitis C
21879313-0#108#119#diseaseC0019196 108-119 diseaseC0019196 denotes hepatitis C
21879313-0#190#209#diseaseC0524910 190-209 diseaseC0524910 denotes chronic hepatitis C
21879313-2#322#325#gene3439 630-633 gene3439 denotes IFN
21879313-2#322#325#gene3447 630-633 gene3447 denotes IFN
21879313-2#95#98#gene5047 403-406 gene5047 denotes PEG
21879313-2#179#194#gene282617 487-502 gene282617 denotes interleukin 28B
21879313-2#196#201#gene282617 504-509 gene282617 denotes IL28B
21879313-2#318#321#gene5047 626-629 gene5047 denotes PEG
21879313-2#341#358#diseaseC0019189 649-666 diseaseC0019189 denotes chronic hepatitis
21879313-2#341#358#diseaseC0019189 649-666 diseaseC0019189 denotes chronic hepatitis
28#33#gene282617108#119#diseaseC0019196 21879313-0#28#33#gene282617 21879313-0#108#119#diseaseC0019196 associated_with IL28B,hepatitis C
28#33#gene282617190#209#diseaseC0524910 21879313-0#28#33#gene282617 21879313-0#190#209#diseaseC0524910 associated_with IL28B,chronic hepatitis C
28#33#gene282617108#119#diseaseC0019196 21879313-0#28#33#gene282617 21879313-0#108#119#diseaseC0019196 associated_with IL28B,hepatitis C
28#33#gene282617190#209#diseaseC0524910 21879313-0#28#33#gene282617 21879313-0#190#209#diseaseC0524910 associated_with IL28B,chronic hepatitis C
152#172#gene338108#119#diseaseC0019196 21879313-0#152#172#gene338 21879313-0#108#119#diseaseC0019196 associated_with apolipoprotein B-100,hepatitis C
152#172#gene338190#209#diseaseC0524910 21879313-0#152#172#gene338 21879313-0#190#209#diseaseC0524910 associated_with apolipoprotein B-100,chronic hepatitis C
152#172#gene338108#119#diseaseC0019196 21879313-0#152#172#gene338 21879313-0#108#119#diseaseC0019196 associated_with apolipoprotein B-100,hepatitis C
152#172#gene338190#209#diseaseC0524910 21879313-0#152#172#gene338 21879313-0#190#209#diseaseC0524910 associated_with apolipoprotein B-100,chronic hepatitis C
322#325#gene3439341#358#diseaseC0019189 21879313-2#322#325#gene3439 21879313-2#341#358#diseaseC0019189 associated_with IFN,chronic hepatitis
322#325#gene3439341#358#diseaseC0019189 21879313-2#322#325#gene3439 21879313-2#341#358#diseaseC0019189 associated_with IFN,chronic hepatitis
322#325#gene3447341#358#diseaseC0019189 21879313-2#322#325#gene3447 21879313-2#341#358#diseaseC0019189 associated_with IFN,chronic hepatitis
322#325#gene3447341#358#diseaseC0019189 21879313-2#322#325#gene3447 21879313-2#341#358#diseaseC0019189 associated_with IFN,chronic hepatitis
95#98#gene5047341#358#diseaseC0019189 21879313-2#95#98#gene5047 21879313-2#341#358#diseaseC0019189 associated_with PEG,chronic hepatitis
95#98#gene5047341#358#diseaseC0019189 21879313-2#95#98#gene5047 21879313-2#341#358#diseaseC0019189 associated_with PEG,chronic hepatitis
179#194#gene282617341#358#diseaseC0019189 21879313-2#179#194#gene282617 21879313-2#341#358#diseaseC0019189 associated_with interleukin 28B,chronic hepatitis
179#194#gene282617341#358#diseaseC0019189 21879313-2#179#194#gene282617 21879313-2#341#358#diseaseC0019189 associated_with interleukin 28B,chronic hepatitis
196#201#gene282617341#358#diseaseC0019189 21879313-2#196#201#gene282617 21879313-2#341#358#diseaseC0019189 associated_with IL28B,chronic hepatitis
196#201#gene282617341#358#diseaseC0019189 21879313-2#196#201#gene282617 21879313-2#341#358#diseaseC0019189 associated_with IL28B,chronic hepatitis
318#321#gene5047341#358#diseaseC0019189 21879313-2#318#321#gene5047 21879313-2#341#358#diseaseC0019189 associated_with PEG,chronic hepatitis
318#321#gene5047341#358#diseaseC0019189 21879313-2#318#321#gene5047 21879313-2#341#358#diseaseC0019189 associated_with PEG,chronic hepatitis

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 9-18 SNP:rs8099917 denotes rs8099917
T2 1047-1056 SNP:rs8099917 denotes rs8099917
T3 1425-1434 SNP:rs8099917 denotes rs8099917
T4 1905-1914 SNP:rs8099917 denotes rs8099917

PubTator4TogoVar

Id Subject Object Predicate Lexical cue resolved_to
5 9-18 SNP denotes rs8099917 tmVar:rs8099917;VariantGroup:0;RS#:8099917
65 1047-1056 SNP denotes rs8099917 tmVar:rs8099917;VariantGroup:0;RS#:8099917
69 1425-1434 SNP denotes rs8099917 tmVar:rs8099917;VariantGroup:0;RS#:8099917
77 1905-1914 SNP denotes rs8099917 tmVar:rs8099917;VariantGroup:0;RS#:8099917

PubTatorOnTogoVar

Id Subject Object Predicate Lexical cue resolved_to
5 9-18 SNP denotes rs8099917 tmVar:rs8099917;VariantGroup:0;RS#:8099917
65 1047-1056 SNP denotes rs8099917 tmVar:rs8099917;VariantGroup:0;RS#:8099917
69 1425-1434 SNP denotes rs8099917 tmVar:rs8099917;VariantGroup:0;RS#:8099917
77 1905-1914 SNP denotes rs8099917 tmVar:rs8099917;VariantGroup:0;RS#:8099917
T1 9-18 SNP denotes rs8099917 tmVar:rs8099917;VariantGroup:0;RS#:8099917|tmVar:rs8099917;VariantGroup:0;RS#:8099917
T1 1047-1056 SNP denotes rs8099917 tmVar:rs8099917;VariantGroup:0;RS#:8099917|tmVar:rs8099917;VariantGroup:0;RS#:8099917
T2 1425-1434 SNP denotes rs8099917 tmVar:rs8099917;VariantGroup:0;RS#:8099917
T3 1905-1914 SNP denotes rs8099917 tmVar:rs8099917;VariantGroup:0;RS#:8099917