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PubMed:21750150 / 500-623 JSONTXT

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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T5 0-123 Sentence denotes We then generated U87TR-Da glioma cells, where DACH1 expression could be activated by exposure of the cells to doxycycline.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
8764 18-26 CellLine denotes U87TR-Da NCBITaxon:9606
8765 27-33 DiseaseOrPhenotypicFeature denotes glioma MESH:D005910
8766 47-52 GeneOrGeneProduct denotes DACH1 NCBIGene:1602
8767 111-122 ChemicalEntity denotes doxycycline MESH:D004318

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T4 27-33 DiseaseOrPhenotypicFeature denotes glioma 0021042

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T16 34-39 GeneOrGeneProduct denotes cells
T17 47-52 GeneOrGeneProduct denotes DACH1
T18 73-82 GeneOrGeneProduct denotes activated
T19 102-107 GeneOrGeneProduct denotes cells

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T8 47-52 GeneOrGeneProduct denotes DACH1

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T7 27-33 DiseaseOrPhenotypicFeature denotes glioma D005910

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T5 47-52 GeneOrGeneProduct denotes DACH1

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T8 27-33 DiseaseOrPhenotypicFeature denotes glioma 0100342|0021042

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T7 27-33 DiseaseOrPhenotypicFeature denotes glioma D005910

LitCoin_CellLine

Id Subject Object Predicate Lexical cue cellosaurus_accession_id
T1 24-26 CellLine denotes Da CVCL_2015

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T7 27-33 DiseaseOrPhenotypicFeature denotes glioma D005910

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 111-122 ChemicalEntity denotes doxycycline D004318|http://purl.obolibrary.org/obo/CHEBI_60648|http://purl.obolibrary.org/obo/CHEBI_50845

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID: cellosaurus_accession_id
T1 24-26 CellLine denotes Da CVCL_2015
T31862 111-122 ChemicalEntity denotes doxycycline http://purl.obolibrary.org/obo/CHEBI_50845|http://purl.obolibrary.org/obo/CHEBI_60648|D004318
T96835 47-52 GeneOrGeneProduct denotes DACH1
T24885 27-33 DiseaseOrPhenotypicFeature denotes glioma D005910

PubmedHPO

Id Subject Object Predicate Lexical cue
T5 27-33 HP_0009733 denotes glioma