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PubMed:21709441 JSONTXT

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LitCoin-PubTator-for-Tuning

Id Subject Object Predicate Lexical cue tao:has_database_id
1 26-52 DiseaseOrPhenotypicFeature denotes endometrial carcinogenesis MESH:D063646
44 185-211 DiseaseOrPhenotypicFeature denotes endometrial carcinogenesis MESH:D063646
45 257-286 DiseaseOrPhenotypicFeature denotes malignant endometrial lesions MESH:D014591
46 360-363 GeneOrGeneProduct denotes ERα Gene:2099
47 391-396 GeneOrGeneProduct denotes hMLH1 Gene:4292
48 399-415 GeneOrGeneProduct denotes tumor-suppressor Gene:7248
49 423-429 GeneOrGeneProduct denotes CDKN2A Gene:1029
50 430-433 GeneOrGeneProduct denotes P16 Gene:1029
51 438-442 GeneOrGeneProduct denotes CDH1 Gene:999
52 443-453 GeneOrGeneProduct denotes E-CADHERIN Gene:999
53 483-488 GeneOrGeneProduct denotes SFRP1 Gene:6422
54 490-495 GeneOrGeneProduct denotes SFRP2 Gene:6423
55 497-502 GeneOrGeneProduct denotes SFRP4 Gene:6424
56 504-509 GeneOrGeneProduct denotes SFRP5 Gene:6425
57 579-598 DiseaseOrPhenotypicFeature denotes endometrial lesions MESH:D014591
58 727-730 GeneOrGeneProduct denotes ERα Gene:2099
59 736-741 GeneOrGeneProduct denotes hMLH1 Gene:4292
60 743-749 GeneOrGeneProduct denotes CDKN2A Gene:1029
61 750-753 GeneOrGeneProduct denotes P16 Gene:1029
62 755-760 GeneOrGeneProduct denotes SFRP1 Gene:6422
63 762-767 GeneOrGeneProduct denotes SFRP2 Gene:6423
64 772-777 GeneOrGeneProduct denotes SFRP5 Gene:6425
65 820-842 DiseaseOrPhenotypicFeature denotes endometrioid carcinoma MESH:D016889
66 852-857 GeneOrGeneProduct denotes SFRP4 Gene:6424
67 882-888 DiseaseOrPhenotypicFeature denotes cancer MESH:D009369
68 890-893 GeneOrGeneProduct denotes P53 Gene:7157
69 960-979 DiseaseOrPhenotypicFeature denotes hyperplasic lesions MESH:D051437
70 987-1006 DiseaseOrPhenotypicFeature denotes endometrioid cancer MESH:D016889
71 1008-1032 DiseaseOrPhenotypicFeature denotes Non-endometrioid cancers MESH:D016889
72 1095-1098 GeneOrGeneProduct denotes P53 Gene:7157
73 1194-1199 GeneOrGeneProduct denotes hMLH1 Gene:4292
74 1201-1207 GeneOrGeneProduct denotes CDKN2A Gene:1029
75 1208-1211 GeneOrGeneProduct denotes P16 Gene:1029
76 1216-1221 GeneOrGeneProduct denotes SFRP1 Gene:6422
77 1244-1267 DiseaseOrPhenotypicFeature denotes endometrioid carcinomas MESH:D016889
78 1280-1285 GeneOrGeneProduct denotes hMLH1 Gene:4292
79 1474-1499 DiseaseOrPhenotypicFeature denotes benign endometrial polyps MESH:D011127
80 1504-1516 DiseaseOrPhenotypicFeature denotes hyperplasias MESH:D006965
81 1574-1579 GeneOrGeneProduct denotes hMLH1 Gene:4292
82 1581-1587 GeneOrGeneProduct denotes CDKN2A Gene:1029
83 1588-1591 GeneOrGeneProduct denotes P16 Gene:1029
84 1596-1601 GeneOrGeneProduct denotes SFRP1 Gene:6422
85 1812-1831 DiseaseOrPhenotypicFeature denotes endometrial lesions MESH:D014591

LitCoin-Disease-Tuning-1

Id Subject Object Predicate Lexical cue ID:
T1 38-52 DiseaseOrPhenotypicFeature denotes carcinogenesis D063646
T2 197-211 DiseaseOrPhenotypicFeature denotes carcinogenesis D063646
T3 399-404 DiseaseOrPhenotypicFeature denotes tumor D009369
T4 698-711 DiseaseOrPhenotypicFeature denotes tumorigenesis D063646
T5 820-842 DiseaseOrPhenotypicFeature denotes endometrioid carcinoma D018269
T6 882-888 DiseaseOrPhenotypicFeature denotes cancer D009369
T7 1000-1006 DiseaseOrPhenotypicFeature denotes cancer D009369
T8 1025-1032 DiseaseOrPhenotypicFeature denotes cancers D009369
T9 1244-1267 DiseaseOrPhenotypicFeature denotes endometrioid carcinomas D018269
T10 1493-1499 DiseaseOrPhenotypicFeature denotes polyps D011127
T11 1504-1516 DiseaseOrPhenotypicFeature denotes hyperplasias D006965

LitCoin-PubTator_CellLine

Id Subject Object Predicate Lexical cue cellosaurus_accession_id
T1 438-442 CellLine denotes CDH1 CVCL_A7GG

LitEisuke

Id Subject Object Predicate Lexical cue #label
T1 38-52 DiseaseOrPhenotypicFeature denotes carcinogenesis D063646
T2 197-211 DiseaseOrPhenotypicFeature denotes carcinogenesis D063646
T3 399-404 DiseaseOrPhenotypicFeature denotes tumor D009369
T4 698-711 DiseaseOrPhenotypicFeature denotes tumorigenesis D063646
T5 820-842 DiseaseOrPhenotypicFeature denotes endometrioid carcinoma D018269
T6 882-888 DiseaseOrPhenotypicFeature denotes cancer D009369
T7 1000-1006 DiseaseOrPhenotypicFeature denotes cancer D009369
T8 1025-1032 DiseaseOrPhenotypicFeature denotes cancers D009369
T9 1244-1267 DiseaseOrPhenotypicFeature denotes endometrioid carcinomas D018269
T10 1493-1499 DiseaseOrPhenotypicFeature denotes polyps D011127
T11 1504-1516 DiseaseOrPhenotypicFeature denotes hyperplasias D006965

DisGeNET

Id Subject Object Predicate Lexical cue
T0 755-760 gene:6422 denotes SFRP1
T1 882-888 disease:C0006826 denotes cancer
T2 755-760 gene:6422 denotes SFRP1
T3 882-888 disease:C1306459 denotes cancer
T4 772-777 gene:6425 denotes SFRP5
T5 820-842 disease:C0206687 denotes endometrioid carcinoma
T6 852-857 gene:6424 denotes SFRP4
T7 882-888 disease:C1306459 denotes cancer
T8 852-857 gene:6424 denotes SFRP4
T9 882-888 disease:C0006826 denotes cancer
T10 1216-1221 gene:6422 denotes SFRP1
T11 1244-1267 disease:C0206687 denotes endometrioid carcinomas
T12 1280-1285 gene:4292 denotes hMLH1
T13 1244-1267 disease:C0206687 denotes endometrioid carcinomas
R1 T0 T1 associated_with SFRP1,cancer
R2 T2 T3 associated_with SFRP1,cancer
R3 T4 T5 associated_with SFRP5,endometrioid carcinoma
R4 T6 T7 associated_with SFRP4,cancer
R5 T8 T9 associated_with SFRP4,cancer
R6 T10 T11 associated_with SFRP1,endometrioid carcinomas
R7 T12 T13 associated_with hMLH1,endometrioid carcinomas

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 399-404 HP_0002664 denotes tumor
T2 882-888 HP_0002664 denotes cancer
T3 1000-1006 HP_0002664 denotes cancer
T4 1025-1032 HP_0002664 denotes cancers

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
21709441-4#59#64#gene6425 772-777 gene6425 denotes SFRP5
21709441-4#107#129#diseaseC0206687 820-842 diseaseC0206687 denotes endometrioid carcinoma
21709441-7#97#102#gene6422 1216-1221 gene6422 denotes SFRP1
21709441-7#161#166#gene4292 1280-1285 gene4292 denotes hMLH1
21709441-7#125#148#diseaseC0206687 1244-1267 diseaseC0206687 denotes endometrioid carcinomas
59#64#gene6425107#129#diseaseC0206687 21709441-4#59#64#gene6425 21709441-4#107#129#diseaseC0206687 associated_with SFRP5,endometrioid carcinoma
97#102#gene6422125#148#diseaseC0206687 21709441-7#97#102#gene6422 21709441-7#125#148#diseaseC0206687 associated_with SFRP1,endometrioid carcinomas
161#166#gene4292125#148#diseaseC0206687 21709441-7#161#166#gene4292 21709441-7#125#148#diseaseC0206687 associated_with hMLH1,endometrioid carcinomas