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PubMed:21496008 JSONTXT

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TEST-DiseaseOrPhenotypicFeature

Id Subject Object Predicate Lexical cue #label
T1 193-206 DiseaseOrPhenotypicFeature denotes malformations DISEASE
T2 224-247 DiseaseOrPhenotypicFeature denotes intellectual disability D008607
T3 249-251 DiseaseOrPhenotypicFeature denotes ID D008607
T4 474-476 DiseaseOrPhenotypicFeature denotes ID D008607

TEST-ChemicalEntity

Id Subject Object Predicate Lexical cue ID:
T1 324-335 ChemicalEntity denotes polyalanine ChemicalEntity
T2 337-339 ChemicalEntity denotes pA ChemicalEntity

TEST-OrganismTaxon

Id Subject Object Predicate Lexical cue
T1 138-143 OrganismTaxon denotes human
T2 1250-1258 OrganismTaxon denotes patients

Test-GeneOrGeneProduct

Id Subject Object Predicate Lexical cue
T1 75-83 GeneOrGeneProduct denotes homeobox
T2 85-88 GeneOrGeneProduct denotes ARX
T3 96-99 GeneOrGeneProduct denotes ARX
T4 254-257 GeneOrGeneProduct denotes ARX
T5 263-283 GeneOrGeneProduct denotes transcription factor
T6 509-512 GeneOrGeneProduct denotes ARX
T7 660-663 GeneOrGeneProduct denotes ARX
T8 687-695 GeneOrGeneProduct denotes stranded
T9 847-850 GeneOrGeneProduct denotes ARX
T10 1134-1145 GeneOrGeneProduct denotes homeodomain
T11 1197-1200 GeneOrGeneProduct denotes ARX
T12 1375-1387 GeneOrGeneProduct denotes ARX proteins
T14 1595-1606 GeneOrGeneProduct denotes homeodomain

Test-SequenceVariant

Id Subject Object Predicate Lexical cue
T1 524-532 SequenceVariant denotes c.304ins
T2 563-575 SequenceVariant denotes c.429_452dup
T3 1147-1156 SequenceVariant denotes c.1074G>T

Test-merged-2

Id Subject Object Predicate Lexical cue #label ID:
T18043 524-532 SequenceVariant denotes c.304ins
T19110 563-575 SequenceVariant denotes c.429_452dup
T54574 1147-1156 SequenceVariant denotes c.1074G>T
T10749 324-335 ChemicalEntity denotes polyalanine ChemicalEntity
T29393 337-339 ChemicalEntity denotes pA ChemicalEntity
T25151 75-83 GeneOrGeneProduct denotes homeobox
T71873 85-88 GeneOrGeneProduct denotes ARX
T98251 96-99 GeneOrGeneProduct denotes ARX
T24667 254-257 GeneOrGeneProduct denotes ARX
T5 263-283 GeneOrGeneProduct denotes transcription factor
T6 509-512 GeneOrGeneProduct denotes ARX
T7 660-663 GeneOrGeneProduct denotes ARX
T8 687-695 GeneOrGeneProduct denotes stranded
T9 847-850 GeneOrGeneProduct denotes ARX
T10 1134-1145 GeneOrGeneProduct denotes homeodomain
T11 1197-1200 GeneOrGeneProduct denotes ARX
T12 1375-1387 GeneOrGeneProduct denotes ARX proteins
T14 1595-1606 GeneOrGeneProduct denotes homeodomain
T24257 138-143 OrganismTaxon denotes human
T52764 1250-1258 OrganismTaxon denotes patients
T1 193-206 DiseaseOrPhenotypicFeature denotes malformations DISEASE
T2 224-247 DiseaseOrPhenotypicFeature denotes intellectual disability D008607
T3 249-251 DiseaseOrPhenotypicFeature denotes ID D008607
T4 474-476 DiseaseOrPhenotypicFeature denotes ID D008607

DisGeNET

Id Subject Object Predicate Lexical cue
T0 509-512 gene:170302 denotes ARX
T1 474-476 disease:C3714756 denotes ID
R1 T0 T1 associated_with ARX,ID

Allie

Id Subject Object Predicate Lexical cue
SS1_21496008_0_0 56-83 expanded denotes Aristaless-related homeobox
SS2_21496008_0_0 85-88 abbr denotes ARX
SS1_21496008_1_0 224-247 expanded denotes intellectual disability
SS2_21496008_1_0 249-251 abbr denotes ID
SS1_21496008_2_0 324-335 expanded denotes polyalanine
SS2_21496008_2_0 337-339 abbr denotes pA
SS1_21496008_4_0 680-721 expanded denotes single stranded polymorphism conformation
SS2_21496008_4_0 723-727 abbr denotes SSCP
SS1_21496008_4_1 736-782 expanded denotes denaturing high pressure liquid chromatography
SS2_21496008_4_1 784-789 abbr denotes dHPLC
AE1_21496008_0_0 SS1_21496008_0_0 SS2_21496008_0_0 abbreviatedTo Aristaless-related homeobox,ARX
AE1_21496008_1_0 SS1_21496008_1_0 SS2_21496008_1_0 abbreviatedTo intellectual disability,ID
AE1_21496008_2_0 SS1_21496008_2_0 SS2_21496008_2_0 abbreviatedTo polyalanine,pA
AE1_21496008_4_0 SS1_21496008_4_0 SS2_21496008_4_0 abbreviatedTo single stranded polymorphism conformation,SSCP
AE1_21496008_4_1 SS1_21496008_4_1 SS2_21496008_4_1 abbreviatedTo denaturing high pressure liquid chromatography,dHPLC

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 175-206 HP_0012443 denotes brain and genital malformations
T2 185-206 HP_0000078 denotes genital malformations
T3 224-247 HP_0001249 denotes intellectual disability
T4 881-892 HP_0009609 denotes duplication
T5 987-999 HP_0009609 denotes duplications

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
21496008-1#0#3#gene170302 96-99 gene170302 denotes ARX
21496008-1#89#110#diseaseC0158687 185-206 diseaseC0158687 denotes genital malformations
21496008-3#99#102#gene170302 509-512 gene170302 denotes ARX
21496008-3#64#66#diseaseC3714756 474-476 diseaseC3714756 denotes ID
0#3#gene17030289#110#diseaseC0158687 21496008-1#0#3#gene170302 21496008-1#89#110#diseaseC0158687 associated_with ARX,genital malformations
99#102#gene17030264#66#diseaseC3714756 21496008-3#99#102#gene170302 21496008-3#64#66#diseaseC3714756 associated_with ARX,ID

PubCasesHPO

Id Subject Object Predicate Lexical cue
AB1 224-247 HP:0001249 denotes intellectual disability

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 524-537 DNAMutation:c|INS|304|GCG denotes c.304ins(GCG)
T2 563-575 DNAMutation:c|DUP|429_452|| denotes c.429_452dup
T3 577-584 DNAMutation:|DUP||24| denotes dup24bp
T4 971-978 DNAMutation:|DUP||24| denotes dup24bp
T5 1016-1023 DNAMutation:|DUP||24| denotes dup24bp
T6 1045-1052 DNAMutation:|DUP||27| denotes dup27bp
T7 1054-1061 DNAMutation:|DUP||33| denotes dup33bp
T8 1147-1156 DNAMutation:c|SUB|G|1074|T denotes c.1074G>T