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PubMed:21421995 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-107 Sentence denotes Conserved oligomeric Golgi complex specifically regulates the maintenance of Golgi glycosylation machinery.
TextSentencer_T2 108-400 Sentence denotes Cell surface lectin staining, examination of Golgi glycosyltransferases stability and localization, and matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) analysis were employed to investigate conserved oligomeric Golgi (COG)-dependent glycosylation defects in HeLa cells.
TextSentencer_T3 401-632 Sentence denotes Both Griffonia simplicifolia lectin-II and Galanthus nivalus lectins were specifically bound to the plasma membrane glycoconjugates of COG-depleted cells, indicating defects in activity of medial- and trans-Golgi-localized enzymes.
TextSentencer_T4 633-827 Sentence denotes In response to siRNA-induced depletion of COG complex subunits, several key components of Golgi glycosylation machinery, including MAN2A1, MGAT1, B4GALT1 and ST6GAL1, were severely mislocalized.
TextSentencer_T5 828-981 Sentence denotes MALDI-TOF analysis of total N-linked glycoconjugates indicated a decrease in the relative amount of sialylated glycans in both COG3 KD and COG4 KD cells.
TextSentencer_T6 982-1244 Sentence denotes In agreement to a proposed role of the COG complex in retrograde membrane trafficking, all types of COG-depleted HeLa cells were deficient in the Brefeldin A- and Sar1 DN-induced redistribution of Golgi resident glycosyltransferases to the endoplasmic reticulum.
TextSentencer_T7 1245-1448 Sentence denotes The retrograde trafficking of medial- and trans-Golgi-localized glycosylation enzymes was affected to a larger extent, strongly indicating that the COG complex regulates the intra-Golgi protein movement.
TextSentencer_T8 1449-1607 Sentence denotes COG complex-deficient cells were not defective in Golgi re-assembly after the Brefeldin A washout, confirming specificity in the retrograde trafficking block.
TextSentencer_T9 1608-1857 Sentence denotes The lobe B COG subcomplex subunits COG6 and COG8 were localized on trafficking intermediates that carry Golgi glycosyltransferases, indicating that the COG complex is directly involved in trafficking and maintenance of Golgi glycosylation machinery.
T1 0-107 Sentence denotes Conserved oligomeric Golgi complex specifically regulates the maintenance of Golgi glycosylation machinery.
T2 108-400 Sentence denotes Cell surface lectin staining, examination of Golgi glycosyltransferases stability and localization, and matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) analysis were employed to investigate conserved oligomeric Golgi (COG)-dependent glycosylation defects in HeLa cells.
T3 401-632 Sentence denotes Both Griffonia simplicifolia lectin-II and Galanthus nivalus lectins were specifically bound to the plasma membrane glycoconjugates of COG-depleted cells, indicating defects in activity of medial- and trans-Golgi-localized enzymes.
T4 633-827 Sentence denotes In response to siRNA-induced depletion of COG complex subunits, several key components of Golgi glycosylation machinery, including MAN2A1, MGAT1, B4GALT1 and ST6GAL1, were severely mislocalized.
T5 828-981 Sentence denotes MALDI-TOF analysis of total N-linked glycoconjugates indicated a decrease in the relative amount of sialylated glycans in both COG3 KD and COG4 KD cells.
T6 982-1244 Sentence denotes In agreement to a proposed role of the COG complex in retrograde membrane trafficking, all types of COG-depleted HeLa cells were deficient in the Brefeldin A- and Sar1 DN-induced redistribution of Golgi resident glycosyltransferases to the endoplasmic reticulum.
T7 1245-1448 Sentence denotes The retrograde trafficking of medial- and trans-Golgi-localized glycosylation enzymes was affected to a larger extent, strongly indicating that the COG complex regulates the intra-Golgi protein movement.
T8 1449-1607 Sentence denotes COG complex-deficient cells were not defective in Golgi re-assembly after the Brefeldin A washout, confirming specificity in the retrograde trafficking block.
T9 1608-1857 Sentence denotes The lobe B COG subcomplex subunits COG6 and COG8 were localized on trafficking intermediates that carry Golgi glycosyltransferases, indicating that the COG complex is directly involved in trafficking and maintenance of Golgi glycosylation machinery.
T1 0-107 Sentence denotes Conserved oligomeric Golgi complex specifically regulates the maintenance of Golgi glycosylation machinery.
T2 108-400 Sentence denotes Cell surface lectin staining, examination of Golgi glycosyltransferases stability and localization, and matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) analysis were employed to investigate conserved oligomeric Golgi (COG)-dependent glycosylation defects in HeLa cells.
T3 401-632 Sentence denotes Both Griffonia simplicifolia lectin-II and Galanthus nivalus lectins were specifically bound to the plasma membrane glycoconjugates of COG-depleted cells, indicating defects in activity of medial- and trans-Golgi-localized enzymes.
T4 633-827 Sentence denotes In response to siRNA-induced depletion of COG complex subunits, several key components of Golgi glycosylation machinery, including MAN2A1, MGAT1, B4GALT1 and ST6GAL1, were severely mislocalized.
T5 828-981 Sentence denotes MALDI-TOF analysis of total N-linked glycoconjugates indicated a decrease in the relative amount of sialylated glycans in both COG3 KD and COG4 KD cells.
T6 982-1244 Sentence denotes In agreement to a proposed role of the COG complex in retrograde membrane trafficking, all types of COG-depleted HeLa cells were deficient in the Brefeldin A- and Sar1 DN-induced redistribution of Golgi resident glycosyltransferases to the endoplasmic reticulum.
T7 1245-1448 Sentence denotes The retrograde trafficking of medial- and trans-Golgi-localized glycosylation enzymes was affected to a larger extent, strongly indicating that the COG complex regulates the intra-Golgi protein movement.
T8 1449-1607 Sentence denotes COG complex-deficient cells were not defective in Golgi re-assembly after the Brefeldin A washout, confirming specificity in the retrograde trafficking block.
T9 1608-1857 Sentence denotes The lobe B COG subcomplex subunits COG6 and COG8 were localized on trafficking intermediates that carry Golgi glycosyltransferases, indicating that the COG complex is directly involved in trafficking and maintenance of Golgi glycosylation machinery.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 590-596 http://purl.obolibrary.org/obo/MAT_0000490 denotes medial
T2 1275-1281 http://purl.obolibrary.org/obo/MAT_0000490 denotes medial

GlycoBiology-GDGDB

Id Subject Object Predicate Lexical cue
_T1 779-786 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00361 denotes B4GALT1
_T2 967-971 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00367 denotes COG4
_T3 1643-1647 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00627 denotes COG6
_T4 1652-1656 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00365 denotes COG8

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 21-34 FMAID:63843 denotes Golgi complex
_T2 21-34 FMAID:162310 denotes Golgi complex
_T3 108-120 FMAID:200942 denotes Cell surface
_T4 108-120 FMAID:212684 denotes Cell surface
_T5 113-120 FMAID:50594 denotes surface
_T6 113-120 FMAID:146300 denotes surface
_T7 394-399 FMAID:169002 denotes cells
_T8 394-399 FMAID:68646 denotes cells
_T9 501-507 FMAID:162307 denotes plasma
_T10 501-516 FMAID:210691 denotes plasma membrane
_T11 501-516 FMAID:66843 denotes plasma membrane
_T12 501-516 FMAID:164993 denotes plasma membrane
_T13 501-516 FMAID:166047 denotes plasma membrane
_T14 501-516 FMAID:162306 denotes plasma membrane
_T15 501-516 FMAID:63841 denotes plasma membrane
_T16 517-532 FMAID:196776 denotes glycoconjugates
_T17 517-532 FMAID:82782 denotes glycoconjugates
_T18 549-554 FMAID:169002 denotes cells
_T19 549-554 FMAID:68646 denotes cells
_T20 590-596 FMAID:171165 denotes medial
_T21 590-596 FMAID:49444 denotes medial
_T22 865-880 FMAID:82782 denotes glycoconjugates
_T23 865-880 FMAID:196776 denotes glycoconjugates
_T24 975-980 FMAID:68646 denotes cells
_T25 975-980 FMAID:169002 denotes cells
_T26 1100-1105 FMAID:169002 denotes cells
_T27 1100-1105 FMAID:68646 denotes cells
_T28 1222-1233 FMAID:165003 denotes endoplasmic
_T29 1222-1233 FMAID:66856 denotes endoplasmic
_T30 1222-1243 FMAID:165141 denotes endoplasmic reticulum
_T31 1222-1243 FMAID:211269 denotes endoplasmic reticulum
_T32 1222-1243 FMAID:199093 denotes endoplasmic reticulum
_T33 1222-1243 FMAID:165250 denotes endoplasmic reticulum
_T34 1222-1243 FMAID:67429 denotes endoplasmic reticulum
_T35 1222-1243 FMAID:80351 denotes endoplasmic reticulum
_T36 1222-1243 FMAID:188464 denotes endoplasmic reticulum
_T37 1222-1243 FMAID:212510 denotes endoplasmic reticulum
_T38 1222-1243 FMAID:162308 denotes endoplasmic reticulum
_T39 1222-1243 FMAID:67434 denotes endoplasmic reticulum
_T40 1222-1243 FMAID:67438 denotes endoplasmic reticulum
_T41 1222-1243 FMAID:63842 denotes endoplasmic reticulum
_T42 1222-1243 FMAID:210694 denotes endoplasmic reticulum
_T43 1222-1243 FMAID:165144 denotes endoplasmic reticulum
_T44 1222-1243 FMAID:66897 denotes endoplasmic reticulum
_T45 1222-1243 FMAID:165026 denotes endoplasmic reticulum
_T46 1222-1243 FMAID:165027 denotes endoplasmic reticulum
_T47 1222-1243 FMAID:165142 denotes endoplasmic reticulum
_T48 1222-1243 FMAID:66898 denotes endoplasmic reticulum
_T49 1222-1243 FMAID:210679 denotes endoplasmic reticulum
_T50 1234-1243 FMAID:94520 denotes reticulum
_T51 1234-1243 FMAID:7646 denotes reticulum
_T52 1275-1281 FMAID:171165 denotes medial
_T53 1275-1281 FMAID:49444 denotes medial
_T54 1431-1438 FMAID:67257 denotes protein
_T55 1431-1438 FMAID:165447 denotes protein
_T56 1471-1476 FMAID:68646 denotes cells
_T57 1471-1476 FMAID:169002 denotes cells
_T58 1505-1507 FMAID:178331 denotes re
_T59 1687-1700 FMAID:74531 denotes intermediates
_T60 1687-1700 FMAID:179268 denotes intermediates

uniprot-human

Id Subject Object Predicate Lexical cue
T1 764-770 http://www.uniprot.org/uniprot/Q16706 denotes MAN2A1
T2 772-777 http://www.uniprot.org/uniprot/Q96PD6 denotes MGAT1
T3 772-777 http://www.uniprot.org/uniprot/P26572 denotes MGAT1
T4 779-786 http://www.uniprot.org/uniprot/Q14523 denotes B4GALT1
T5 791-798 http://www.uniprot.org/uniprot/P15907 denotes ST6GAL1
T6 955-959 http://www.uniprot.org/uniprot/Q96JB2 denotes COG3
T7 967-971 http://www.uniprot.org/uniprot/Q9H9E3 denotes COG4
T8 1643-1647 http://www.uniprot.org/uniprot/Q9Y2V7 denotes COG6
T9 1652-1656 http://www.uniprot.org/uniprot/Q96MW5 denotes COG8

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 772-777 http://www.uniprot.org/uniprot/Q91ZV4 denotes MGAT1

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 10-20 http://purl.bioontology.org/ontology/NCBITAXON/265229 denotes oligomeric
T2 10-20 http://purl.bioontology.org/ontology/NCBITAXON/441291 denotes oligomeric
T3 228-233 http://purl.bioontology.org/ontology/NCBITAXON/62990 denotes laser
T4 331-341 http://purl.bioontology.org/ontology/NCBITAXON/441291 denotes oligomeric
T5 331-341 http://purl.bioontology.org/ontology/NCBITAXON/265229 denotes oligomeric
T6 394-399 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T7 406-415 http://purl.bioontology.org/ontology/NCBITAXON/3849 denotes Griffonia
T8 406-429 http://purl.bioontology.org/ontology/NCBITAXON/3850 denotes Griffonia simplicifolia
T9 416-429 http://purl.bioontology.org/ontology/NCBITAXON/941451 denotes simplicifolia
T10 444-453 http://purl.bioontology.org/ontology/NCBITAXON/4669 denotes Galanthus
T11 444-461 http://purl.bioontology.org/ontology/NCBITAXON/4670 denotes Galanthus nivalus
T12 549-554 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T13 975-980 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T14 1100-1105 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T15 1471-1476 http://purl.bioontology.org/ontology/STY/T025 denotes cells

GO-BP

Id Subject Object Predicate Lexical cue
T1 48-57 http://purl.obolibrary.org/obo/GO_0065007 denotes regulates
T2 1405-1414 http://purl.obolibrary.org/obo/GO_0065007 denotes regulates
T3 83-96 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T4 364-377 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 729-742 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 1309-1322 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T7 1833-1846 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T8 194-206 http://purl.obolibrary.org/obo/GO_0051179 denotes localization
T9 614-623 http://purl.obolibrary.org/obo/GO_0051179 denotes localized
T10 1299-1308 http://purl.obolibrary.org/obo/GO_0051179 denotes localized
T11 1662-1671 http://purl.obolibrary.org/obo/GO_0051179 denotes localized
T12 264-270 http://purl.obolibrary.org/obo/GO_0060361 denotes flight
T13 608-623 http://purl.obolibrary.org/obo/GO_0051645 denotes Golgi-localized
T14 1293-1308 http://purl.obolibrary.org/obo/GO_0051645 denotes Golgi-localized
T15 928-938 http://purl.obolibrary.org/obo/GO_0097503 denotes sialylated

GO-CC

Id Subject Object Predicate Lexical cue
T1 21-26 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T2 77-82 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T3 153-158 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T4 342-347 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T5 608-613 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T6 723-728 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T7 1179-1184 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T8 1293-1298 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T9 1425-1430 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T10 1499-1504 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T11 1712-1717 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T12 1827-1832 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi
T13 21-34 http://purl.obolibrary.org/obo/GO_0005794 denotes Golgi complex
T14 108-112 http://purl.obolibrary.org/obo/GO_0005623 denotes Cell
T15 394-399 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T16 549-554 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T17 975-980 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T18 1100-1105 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T19 1471-1476 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T20 108-120 http://purl.obolibrary.org/obo/GO_0009986 denotes Cell surface
T21 501-516 http://purl.obolibrary.org/obo/GO_0005886 denotes plasma membrane
T22 508-516 http://purl.obolibrary.org/obo/GO_0016020 denotes membrane
T23 1047-1055 http://purl.obolibrary.org/obo/GO_0016020 denotes membrane
T24 675-686 http://purl.obolibrary.org/obo/GO_0017119 denotes COG complex
T25 1021-1032 http://purl.obolibrary.org/obo/GO_0017119 denotes COG complex
T26 1393-1404 http://purl.obolibrary.org/obo/GO_0017119 denotes COG complex
T27 1449-1460 http://purl.obolibrary.org/obo/GO_0017119 denotes COG complex
T28 1760-1771 http://purl.obolibrary.org/obo/GO_0017119 denotes COG complex
T29 709-728 http://purl.obolibrary.org/obo/GO_0044431 denotes components of Golgi
T30 1222-1243 http://purl.obolibrary.org/obo/GO_0005783 denotes endoplasmic reticulum

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 590-596 http://purl.obolibrary.org/obo/UBERON_3010194 denotes medial
T2 1275-1281 http://purl.obolibrary.org/obo/UBERON_3010194 denotes medial
T3 1612-1616 http://purl.obolibrary.org/obo/UBERON_3010752 denotes lobe

Allie

Id Subject Object Predicate Lexical cue
SS1_21421995_1_0 212-270 expanded denotes matrix-assisted laser desorption ionization-time of flight
SS2_21421995_1_0 272-281 abbr denotes MALDI-TOF
SS1_21421995_1_1 321-347 expanded denotes conserved oligomeric Golgi
SS2_21421995_1_1 349-352 abbr denotes COG
AE1_21421995_1_0 SS1_21421995_1_0 SS2_21421995_1_0 abbreviatedTo matrix-assisted laser desorption ionization-time of flight,MALDI-TOF
AE1_21421995_1_1 SS1_21421995_1_1 SS2_21421995_1_1 abbreviatedTo conserved oligomeric Golgi,COG

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 590-596 http://purl.obolibrary.org/obo/MAT_0000490 denotes medial
T2 1275-1281 http://purl.obolibrary.org/obo/MAT_0000490 denotes medial

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 1069-1072 "http://rdf.glycoinfo.org/glycan/G41652MJ" denotes all
GlycanIUPAC_T2 1069-1072 "http://rdf.glycoinfo.org/glycan/G20761YC" denotes all
GlycanIUPAC_T3 1069-1072 "http://rdf.glycoinfo.org/glycan/G19807HM" denotes all
GlycanIUPAC_T4 1069-1072 "http://rdf.glycoinfo.org/glycan/G20351TE" denotes all
GlycanIUPAC_T5 1069-1072 "http://rdf.glycoinfo.org/glycan/G71957MR" denotes all
GlycanIUPAC_T6 1069-1072 "http://rdf.glycoinfo.org/glycan/G59040AE" denotes all
GlycanIUPAC_T7 1069-1072 "http://rdf.glycoinfo.org/glycan/G14987PW" denotes all
GlycanIUPAC_T8 1069-1072 "http://rdf.glycoinfo.org/glycan/G95064PC" denotes all
GlycanIUPAC_T9 1069-1072 "http://rdf.glycoinfo.org/glycan/G39143AQ" denotes all
GlycanIUPAC_T10 1069-1072 "http://rdf.glycoinfo.org/glycan/G65149OO" denotes all
GlycanIUPAC_T11 1069-1072 "http://rdf.glycoinfo.org/glycan/G02766SY" denotes all
GlycanIUPAC_T12 1069-1072 "http://rdf.glycoinfo.org/glycan/G26019KJ" denotes all
GlycanIUPAC_T13 1069-1072 "http://rdf.glycoinfo.org/glycan/G36429CZ" denotes all
GlycanIUPAC_T14 1069-1072 "http://rdf.glycoinfo.org/glycan/G89633TP" denotes all
GlycanIUPAC_T15 1069-1072 "http://rdf.glycoinfo.org/glycan/G28494FO" denotes all
GlycanIUPAC_T16 1069-1072 "http://rdf.glycoinfo.org/glycan/G06219CP" denotes all
GlycanIUPAC_T17 1069-1072 "http://rdf.glycoinfo.org/glycan/G44237SM" denotes all
GlycanIUPAC_T18 1069-1072 "http://rdf.glycoinfo.org/glycan/G57948RL" denotes all
GlycanIUPAC_T19 1069-1072 "http://rdf.glycoinfo.org/glycan/G64016DN" denotes all
GlycanIUPAC_T20 1069-1072 "http://rdf.glycoinfo.org/glycan/G14536PC" denotes all
GlycanIUPAC_T21 1069-1072 "http://rdf.glycoinfo.org/glycan/G14356FW" denotes all
GlycanIUPAC_T22 1069-1072 "http://rdf.glycoinfo.org/glycan/G34565UO" denotes all
GlycanIUPAC_T23 1069-1072 "http://rdf.glycoinfo.org/glycan/G67124MW" denotes all
GlycanIUPAC_T24 1069-1072 "http://rdf.glycoinfo.org/glycan/G71457ZU" denotes all
GlycanIUPAC_T25 1069-1072 "http://rdf.glycoinfo.org/glycan/G55228VZ" denotes all
GlycanIUPAC_T26 1069-1072 "http://rdf.glycoinfo.org/glycan/G31034MJ" denotes all
GlycanIUPAC_T27 1069-1072 "http://rdf.glycoinfo.org/glycan/G25776IP" denotes all
GlycanIUPAC_T28 1069-1072 "http://rdf.glycoinfo.org/glycan/G64442BV" denotes all
GlycanIUPAC_T29 1069-1072 "http://rdf.glycoinfo.org/glycan/G57018LE" denotes all
GlycanIUPAC_T30 1069-1072 "http://rdf.glycoinfo.org/glycan/G61761GX" denotes all
GlycanIUPAC_T31 1069-1072 "http://rdf.glycoinfo.org/glycan/G76318UX" denotes all
GlycanIUPAC_T32 1069-1072 "http://rdf.glycoinfo.org/glycan/G61906ER" denotes all
GlycanIUPAC_T33 1069-1072 "http://rdf.glycoinfo.org/glycan/G68723GR" denotes all
GlycanIUPAC_T34 1069-1072 "http://rdf.glycoinfo.org/glycan/G19540LE" denotes all
GlycanIUPAC_T35 1069-1072 "http://rdf.glycoinfo.org/glycan/G74944PO" denotes all
GlycanIUPAC_T36 1069-1072 "http://rdf.glycoinfo.org/glycan/G89489ZJ" denotes all
GlycanIUPAC_T37 1069-1072 "http://rdf.glycoinfo.org/glycan/G04434YU" denotes all
GlycanIUPAC_T38 1069-1072 "http://rdf.glycoinfo.org/glycan/G21450PB" denotes all
GlycanIUPAC_T39 1069-1072 "http://rdf.glycoinfo.org/glycan/G93629QY" denotes all
GlycanIUPAC_T40 1069-1072 "http://rdf.glycoinfo.org/glycan/G02603TR" denotes all
GlycanIUPAC_T41 1069-1072 "http://rdf.glycoinfo.org/glycan/G40280JP" denotes all
GlycanIUPAC_T42 1069-1072 "http://rdf.glycoinfo.org/glycan/G95259IC" denotes all
GlycanIUPAC_T43 1069-1072 "http://rdf.glycoinfo.org/glycan/G26900FE" denotes all
GlycanIUPAC_T44 1069-1072 "http://rdf.glycoinfo.org/glycan/G21346KK" denotes all
GlycanIUPAC_T45 1069-1072 "http://rdf.glycoinfo.org/glycan/G62509FF" denotes all
GlycanIUPAC_T46 1069-1072 "http://rdf.glycoinfo.org/glycan/G83932AK" denotes all
GlycanIUPAC_T47 1069-1072 "http://rdf.glycoinfo.org/glycan/G96978IB" denotes all
GlycanIUPAC_T48 1069-1072 "http://rdf.glycoinfo.org/glycan/G34275DN" denotes all
GlycanIUPAC_T49 1069-1072 "http://rdf.glycoinfo.org/glycan/G07071JF" denotes all
GlycanIUPAC_T50 1069-1072 "http://rdf.glycoinfo.org/glycan/G80639QD" denotes all
GlycanIUPAC_T51 1069-1072 "http://rdf.glycoinfo.org/glycan/G99460PJ" denotes all
GlycanIUPAC_T52 1069-1072 "http://rdf.glycoinfo.org/glycan/G22024BZ" denotes all
GlycanIUPAC_T53 1069-1072 "http://rdf.glycoinfo.org/glycan/G74097ZY" denotes all
GlycanIUPAC_T54 1069-1072 "http://rdf.glycoinfo.org/glycan/G84439YP" denotes all
GlycanIUPAC_T55 1069-1072 "http://rdf.glycoinfo.org/glycan/G52207WQ" denotes all
GlycanIUPAC_T56 1069-1072 "http://rdf.glycoinfo.org/glycan/G90695MS" denotes all
GlycanIUPAC_T57 1069-1072 "http://rdf.glycoinfo.org/glycan/G50398QX" denotes all
GlycanIUPAC_T58 1069-1072 "http://rdf.glycoinfo.org/glycan/G12166ZT" denotes all
GlycanIUPAC_T59 1069-1072 "http://rdf.glycoinfo.org/glycan/G48368BR" denotes all
GlycanIUPAC_T60 1069-1072 "http://rdf.glycoinfo.org/glycan/G57407RW" denotes all
GlycanIUPAC_T61 1069-1072 "http://rdf.glycoinfo.org/glycan/G00386TY" denotes all
GlycanIUPAC_T62 1069-1072 "http://rdf.glycoinfo.org/glycan/G18723JK" denotes all
GlycanIUPAC_T63 1069-1072 "http://rdf.glycoinfo.org/glycan/G93757OR" denotes all
GlycanIUPAC_T64 1069-1072 "http://rdf.glycoinfo.org/glycan/G29006SI" denotes all
GlycanIUPAC_T65 1069-1072 "http://rdf.glycoinfo.org/glycan/G03099OQ" denotes all
GlycanIUPAC_T66 1069-1072 "http://rdf.glycoinfo.org/glycan/G53739OW" denotes all
GlycanIUPAC_T67 1069-1072 "http://rdf.glycoinfo.org/glycan/G70440ZO" denotes all
GlycanIUPAC_T68 1069-1072 "http://rdf.glycoinfo.org/glycan/G29951RR" denotes all
GlycanIUPAC_T69 1069-1072 "http://rdf.glycoinfo.org/glycan/G58402TI" denotes all
GlycanIUPAC_T70 1069-1072 "http://rdf.glycoinfo.org/glycan/G39875TP" denotes all
GlycanIUPAC_T71 1069-1072 "http://rdf.glycoinfo.org/glycan/G83439QV" denotes all
GlycanIUPAC_T72 1069-1072 "http://rdf.glycoinfo.org/glycan/G41762RC" denotes all
GlycanIUPAC_T73 1069-1072 "http://rdf.glycoinfo.org/glycan/G91604UI" denotes all
GlycanIUPAC_T74 1069-1072 "http://rdf.glycoinfo.org/glycan/G88447WE" denotes all
GlycanIUPAC_T75 1069-1072 "http://rdf.glycoinfo.org/glycan/G93634BS" denotes all
GlycanIUPAC_T76 1069-1072 "http://rdf.glycoinfo.org/glycan/G02587BH" denotes all
GlycanIUPAC_T77 1069-1072 "http://rdf.glycoinfo.org/glycan/G43511MX" denotes all
GlycanIUPAC_T78 1069-1072 "http://rdf.glycoinfo.org/glycan/G64958DH" denotes all
GlycanIUPAC_T79 1069-1072 "http://rdf.glycoinfo.org/glycan/G30384TR" denotes all
GlycanIUPAC_T80 1069-1072 "http://rdf.glycoinfo.org/glycan/G15624EX" denotes all
GlycanIUPAC_T81 1069-1072 "http://rdf.glycoinfo.org/glycan/G22706ST" denotes all
GlycanIUPAC_T82 1069-1072 "http://rdf.glycoinfo.org/glycan/G57408PI" denotes all
GlycanIUPAC_T83 1069-1072 "http://rdf.glycoinfo.org/glycan/G86403XX" denotes all
GlycanIUPAC_T84 1069-1072 "http://rdf.glycoinfo.org/glycan/G78043YB" denotes all
GlycanIUPAC_T85 1069-1072 "http://rdf.glycoinfo.org/glycan/G18952JK" denotes all
GlycanIUPAC_T86 1069-1072 "http://rdf.glycoinfo.org/glycan/G49020ND" denotes all
GlycanIUPAC_T87 1069-1072 "http://rdf.glycoinfo.org/glycan/G63590YW" denotes all
GlycanIUPAC_T88 1069-1072 "http://rdf.glycoinfo.org/glycan/G22793KS" denotes all
GlycanIUPAC_T89 1069-1072 "http://rdf.glycoinfo.org/glycan/G64134SS" denotes all
GlycanIUPAC_T90 1069-1072 "http://rdf.glycoinfo.org/glycan/G17338HY" denotes all
GlycanIUPAC_T91 1069-1072 "http://rdf.glycoinfo.org/glycan/G99745XF" denotes all
GlycanIUPAC_T92 1069-1072 "http://rdf.glycoinfo.org/glycan/G27782HN" denotes all
GlycanIUPAC_T93 1069-1072 "http://rdf.glycoinfo.org/glycan/G57496DC" denotes all
GlycanIUPAC_T94 1069-1072 "http://rdf.glycoinfo.org/glycan/G93169WB" denotes all
GlycanIUPAC_T95 1069-1072 "http://rdf.glycoinfo.org/glycan/G05518TD" denotes all
GlycanIUPAC_T96 1069-1072 "http://rdf.glycoinfo.org/glycan/G62603DN" denotes all
GlycanIUPAC_T97 1069-1072 "http://rdf.glycoinfo.org/glycan/G59574FS" denotes all
GlycanIUPAC_T98 1069-1072 "http://rdf.glycoinfo.org/glycan/G47567WC" denotes all

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 1612-1616 http://purl.obolibrary.org/obo/UBERON_3010752 denotes lobe
PD-UBERON-AE-B_T2 590-596 http://purl.obolibrary.org/obo/UBERON_3010194 denotes medial
PD-UBERON-AE-B_T3 1275-1281 http://purl.obolibrary.org/obo/UBERON_3010194 denotes medial

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 590-596 Body_part denotes medial http://purl.obolibrary.org/obo/MAT_0000490
T2 1275-1281 Body_part denotes medial http://purl.obolibrary.org/obo/MAT_0000490

Lectin-Jamboree-Sentence

Id Subject Object Predicate Lexical cue
T1 0-107 Sentence denotes Conserved oligomeric Golgi complex specifically regulates the maintenance of Golgi glycosylation machinery.
T2 108-400 Sentence denotes Cell surface lectin staining, examination of Golgi glycosyltransferases stability and localization, and matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) analysis were employed to investigate conserved oligomeric Golgi (COG)-dependent glycosylation defects in HeLa cells.
T3 401-632 Sentence denotes Both Griffonia simplicifolia lectin-II and Galanthus nivalus lectins were specifically bound to the plasma membrane glycoconjugates of COG-depleted cells, indicating defects in activity of medial- and trans-Golgi-localized enzymes.
T4 633-827 Sentence denotes In response to siRNA-induced depletion of COG complex subunits, several key components of Golgi glycosylation machinery, including MAN2A1, MGAT1, B4GALT1 and ST6GAL1, were severely mislocalized.
T5 828-981 Sentence denotes MALDI-TOF analysis of total N-linked glycoconjugates indicated a decrease in the relative amount of sialylated glycans in both COG3 KD and COG4 KD cells.
T6 982-1244 Sentence denotes In agreement to a proposed role of the COG complex in retrograde membrane trafficking, all types of COG-depleted HeLa cells were deficient in the Brefeldin A- and Sar1 DN-induced redistribution of Golgi resident glycosyltransferases to the endoplasmic reticulum.
T7 1245-1448 Sentence denotes The retrograde trafficking of medial- and trans-Golgi-localized glycosylation enzymes was affected to a larger extent, strongly indicating that the COG complex regulates the intra-Golgi protein movement.
T8 1449-1607 Sentence denotes COG complex-deficient cells were not defective in Golgi re-assembly after the Brefeldin A washout, confirming specificity in the retrograde trafficking block.
T9 1608-1857 Sentence denotes The lobe B COG subcomplex subunits COG6 and COG8 were localized on trafficking intermediates that carry Golgi glycosyltransferases, indicating that the COG complex is directly involved in trafficking and maintenance of Golgi glycosylation machinery.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 406-429 OrganismTaxon denotes Griffonia simplicifolia 3850
T2 444-453 OrganismTaxon denotes Galanthus 4669

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 21-34 Body_part denotes Golgi complex http://purl.obolibrary.org/obo/GO_0005794
T2 77-82 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T3 153-158 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T4 342-347 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T5 501-516 Body_part denotes plasma membrane http://purl.obolibrary.org/obo/GO_0005886
T6 608-613 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T7 723-728 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T8 1047-1055 Body_part denotes membrane http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158
T11 1179-1184 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T12 1234-1243 Body_part denotes reticulum http://purl.obolibrary.org/obo/UBERON_0007361
T13 1293-1298 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T14 1425-1430 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T15 1499-1504 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T16 1712-1717 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794
T17 1827-1832 Body_part denotes Golgi http://purl.obolibrary.org/obo/GO_0005794