PubMed:21416598 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"http://pubannotation.org/docs/sourcedb/PubMed/sourceid/21416598","sourcedb":"PubMed","sourceid":"21416598","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/21416598","text":"AXIN2-associated autosomal dominant ectodermal dysplasia and neoplastic syndrome.\nWe describe a family with a novel, inherited AXIN2 mutation (c.1989G\u003eA) segregating in an autosomal dominant pattern with oligodontia and variable other findings including colonic polyposis, gastric polyps, a mild ectodermal dysplasia phenotype with sparse hair and eyebrows, and early onset colorectal and breast cancers. This novel mutation predicts p.Trp663X, which is a truncated protein that is missing the last three exons, including the DIX (Disheveled and AXIN interacting) domain. This nonsense mutation is predicted to destroy the inhibitory action of AXIN2 on WNT signaling. Previous authors have described an unrelated family with autosomal dominant oligodontia and a variable colorectal phenotype segregating with a nonsense mutation of AXIN2, as well as a frameshift AXIN2 mutation in an unrelated individual with oligodontia. Our report provides additional evidence supporting an autosomal dominant AXIN2-associated ectodermal dysplasia and neoplastic syndrome.","tracks":[{"project":"sentences","denotations":[{"id":"TextSentencer_T1","span":{"begin":0,"end":81},"obj":"Sentence"},{"id":"TextSentencer_T2","span":{"begin":82,"end":404},"obj":"Sentence"},{"id":"TextSentencer_T3","span":{"begin":405,"end":571},"obj":"Sentence"},{"id":"TextSentencer_T4","span":{"begin":572,"end":667},"obj":"Sentence"},{"id":"TextSentencer_T5","span":{"begin":668,"end":922},"obj":"Sentence"},{"id":"TextSentencer_T6","span":{"begin":923,"end":1058},"obj":"Sentence"},{"id":"T1","span":{"begin":0,"end":81},"obj":"Sentence"},{"id":"T2","span":{"begin":82,"end":404},"obj":"Sentence"},{"id":"T3","span":{"begin":405,"end":571},"obj":"Sentence"},{"id":"T4","span":{"begin":572,"end":667},"obj":"Sentence"},{"id":"T5","span":{"begin":668,"end":922},"obj":"Sentence"},{"id":"T6","span":{"begin":923,"end":1058},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T1","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T2","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T3","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T4","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T5","pred":"source","obj":"sentences"},{"subj":"TextSentencer_T6","pred":"source","obj":"sentences"},{"subj":"T1","pred":"source","obj":"sentences"},{"subj":"T2","pred":"source","obj":"sentences"},{"subj":"T3","pred":"source","obj":"sentences"},{"subj":"T4","pred":"source","obj":"sentences"},{"subj":"T5","pred":"source","obj":"sentences"},{"subj":"T6","pred":"source","obj":"sentences"}]},{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":0,"end":5},"obj":"gene:8313"},{"id":"T1","span":{"begin":61,"end":80},"obj":"disease:C0027651"},{"id":"T2","span":{"begin":0,"end":5},"obj":"gene:8313"},{"id":"T3","span":{"begin":61,"end":80},"obj":"disease:C1882062"},{"id":"T4","span":{"begin":0,"end":5},"obj":"gene:8313"},{"id":"T5","span":{"begin":36,"end":56},"obj":"disease:C0013575"},{"id":"T6","span":{"begin":127,"end":132},"obj":"gene:8313"},{"id":"T7","span":{"begin":204,"end":215},"obj":"disease:C0020608"},{"id":"T8","span":{"begin":127,"end":132},"obj":"gene:8313"},{"id":"T9","span":{"begin":389,"end":403},"obj":"disease:C0006142"},{"id":"T10","span":{"begin":127,"end":132},"obj":"gene:8313"},{"id":"T11","span":{"begin":296,"end":316},"obj":"disease:C0013575"},{"id":"T12","span":{"begin":832,"end":837},"obj":"gene:8313"},{"id":"T13","span":{"begin":744,"end":755},"obj":"disease:C0020608"},{"id":"T14","span":{"begin":832,"end":837},"obj":"gene:8313"},{"id":"T15","span":{"begin":910,"end":921},"obj":"disease:C0020608"},{"id":"T16","span":{"begin":863,"end":868},"obj":"gene:8313"},{"id":"T17","span":{"begin":910,"end":921},"obj":"disease:C0020608"},{"id":"T18","span":{"begin":996,"end":1001},"obj":"gene:8313"},{"id":"T19","span":{"begin":1038,"end":1057},"obj":"disease:C1882062"},{"id":"T20","span":{"begin":996,"end":1001},"obj":"gene:8313"},{"id":"T21","span":{"begin":1038,"end":1057},"obj":"disease:C0027651"},{"id":"T22","span":{"begin":996,"end":1001},"obj":"gene:8313"},{"id":"T23","span":{"begin":1013,"end":1033},"obj":"disease:C0013575"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"},{"id":"R2","pred":"associated_with","subj":"T2","obj":"T3"},{"id":"R3","pred":"associated_with","subj":"T4","obj":"T5"},{"id":"R4","pred":"associated_with","subj":"T6","obj":"T7"},{"id":"R5","pred":"associated_with","subj":"T8","obj":"T9"},{"id":"R6","pred":"associated_with","subj":"T10","obj":"T11"},{"id":"R7","pred":"associated_with","subj":"T12","obj":"T13"},{"id":"R8","pred":"associated_with","subj":"T14","obj":"T15"},{"id":"R9","pred":"associated_with","subj":"T16","obj":"T17"},{"id":"R10","pred":"associated_with","subj":"T18","obj":"T19"},{"id":"R11","pred":"associated_with","subj":"T20","obj":"T21"},{"id":"R12","pred":"associated_with","subj":"T22","obj":"T23"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"attributes":[{"subj":"T0","pred":"source","obj":"DisGeNET"},{"subj":"T1","pred":"source","obj":"DisGeNET"},{"subj":"T2","pred":"source","obj":"DisGeNET"},{"subj":"T3","pred":"source","obj":"DisGeNET"},{"subj":"T4","pred":"source","obj":"DisGeNET"},{"subj":"T5","pred":"source","obj":"DisGeNET"},{"subj":"T6","pred":"source","obj":"DisGeNET"},{"subj":"T7","pred":"source","obj":"DisGeNET"},{"subj":"T8","pred":"source","obj":"DisGeNET"},{"subj":"T9","pred":"source","obj":"DisGeNET"},{"subj":"T10","pred":"source","obj":"DisGeNET"},{"subj":"T11","pred":"source","obj":"DisGeNET"},{"subj":"T12","pred":"source","obj":"DisGeNET"},{"subj":"T13","pred":"source","obj":"DisGeNET"},{"subj":"T14","pred":"source","obj":"DisGeNET"},{"subj":"T15","pred":"source","obj":"DisGeNET"},{"subj":"T16","pred":"source","obj":"DisGeNET"},{"subj":"T17","pred":"source","obj":"DisGeNET"},{"subj":"T18","pred":"source","obj":"DisGeNET"},{"subj":"T19","pred":"source","obj":"DisGeNET"},{"subj":"T20","pred":"source","obj":"DisGeNET"},{"subj":"T21","pred":"source","obj":"DisGeNET"},{"subj":"T22","pred":"source","obj":"DisGeNET"},{"subj":"T23","pred":"source","obj":"DisGeNET"}]},{"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":172,"end":190},"obj":"HP_0000006"},{"id":"T2","span":{"begin":204,"end":215},"obj":"HP_0000677"},{"id":"T3","span":{"begin":296,"end":316},"obj":"HP_0000968"},{"id":"T4","span":{"begin":332,"end":343},"obj":"HP_0008070"},{"id":"T5","span":{"begin":332,"end":356},"obj":"HP_0000535"},{"id":"T6","span":{"begin":389,"end":403},"obj":"HP_0003002"},{"id":"T7","span":{"begin":389,"end":403},"obj":"HP_0100013"},{"id":"T8","span":{"begin":396,"end":403},"obj":"HP_0002664"},{"id":"T9","span":{"begin":725,"end":743},"obj":"HP_0000006"},{"id":"T10","span":{"begin":744,"end":755},"obj":"HP_0000677"},{"id":"T11","span":{"begin":910,"end":921},"obj":"HP_0000677"},{"id":"T12","span":{"begin":977,"end":995},"obj":"HP_0000006"},{"id":"T13","span":{"begin":1013,"end":1033},"obj":"HP_0000968"}],"attributes":[{"subj":"T1","pred":"source","obj":"PubmedHPO"},{"subj":"T2","pred":"source","obj":"PubmedHPO"},{"subj":"T3","pred":"source","obj":"PubmedHPO"},{"subj":"T4","pred":"source","obj":"PubmedHPO"},{"subj":"T5","pred":"source","obj":"PubmedHPO"},{"subj":"T6","pred":"source","obj":"PubmedHPO"},{"subj":"T7","pred":"source","obj":"PubmedHPO"},{"subj":"T8","pred":"source","obj":"PubmedHPO"},{"subj":"T9","pred":"source","obj":"PubmedHPO"},{"subj":"T10","pred":"source","obj":"PubmedHPO"},{"subj":"T11","pred":"source","obj":"PubmedHPO"},{"subj":"T12","pred":"source","obj":"PubmedHPO"},{"subj":"T13","pred":"source","obj":"PubmedHPO"}]},{"project":"Allie","denotations":[{"id":"SS1_21416598_2_0","span":{"begin":531,"end":562},"obj":"expanded"},{"id":"SS2_21416598_2_0","span":{"begin":526,"end":529},"obj":"abbr"}],"relations":[{"id":"AE1_21416598_2_0","pred":"abbreviatedTo","subj":"SS1_21416598_2_0","obj":"SS2_21416598_2_0"}],"attributes":[{"subj":"SS1_21416598_2_0","pred":"source","obj":"Allie"},{"subj":"SS2_21416598_2_0","pred":"source","obj":"Allie"}]},{"project":"DisGeNET5_gene_disease","denotations":[{"id":"21416598-4#164#169#gene8313","span":{"begin":832,"end":837},"obj":"gene8313"},{"id":"21416598-4#195#200#gene8313","span":{"begin":863,"end":868},"obj":"gene8313"},{"id":"21416598-4#76#87#diseaseC0020608","span":{"begin":744,"end":755},"obj":"diseaseC0020608"},{"id":"21416598-4#76#87#diseaseC4082304","span":{"begin":744,"end":755},"obj":"diseaseC4082304"},{"id":"21416598-4#242#253#diseaseC0020608","span":{"begin":910,"end":921},"obj":"diseaseC0020608"},{"id":"21416598-4#242#253#diseaseC4082304","span":{"begin":910,"end":921},"obj":"diseaseC4082304"},{"id":"21416598-4#242#253#diseaseC0020608","span":{"begin":910,"end":921},"obj":"diseaseC0020608"},{"id":"21416598-4#242#253#diseaseC4082304","span":{"begin":910,"end":921},"obj":"diseaseC4082304"}],"relations":[{"id":"164#169#gene831376#87#diseaseC0020608","pred":"associated_with","subj":"21416598-4#164#169#gene8313","obj":"21416598-4#76#87#diseaseC0020608"},{"id":"164#169#gene831376#87#diseaseC4082304","pred":"associated_with","subj":"21416598-4#164#169#gene8313","obj":"21416598-4#76#87#diseaseC4082304"},{"id":"164#169#gene8313242#253#diseaseC0020608","pred":"associated_with","subj":"21416598-4#164#169#gene8313","obj":"21416598-4#242#253#diseaseC0020608"},{"id":"164#169#gene8313242#253#diseaseC4082304","pred":"associated_with","subj":"21416598-4#164#169#gene8313","obj":"21416598-4#242#253#diseaseC4082304"},{"id":"164#169#gene8313242#253#diseaseC0020608","pred":"associated_with","subj":"21416598-4#164#169#gene8313","obj":"21416598-4#242#253#diseaseC0020608"},{"id":"164#169#gene8313242#253#diseaseC4082304","pred":"associated_with","subj":"21416598-4#164#169#gene8313","obj":"21416598-4#242#253#diseaseC4082304"},{"id":"195#200#gene831376#87#diseaseC0020608","pred":"associated_with","subj":"21416598-4#195#200#gene8313","obj":"21416598-4#76#87#diseaseC0020608"},{"id":"195#200#gene831376#87#diseaseC4082304","pred":"associated_with","subj":"21416598-4#195#200#gene8313","obj":"21416598-4#76#87#diseaseC4082304"},{"id":"195#200#gene8313242#253#diseaseC0020608","pred":"associated_with","subj":"21416598-4#195#200#gene8313","obj":"21416598-4#242#253#diseaseC0020608"},{"id":"195#200#gene8313242#253#diseaseC4082304","pred":"associated_with","subj":"21416598-4#195#200#gene8313","obj":"21416598-4#242#253#diseaseC4082304"},{"id":"195#200#gene8313242#253#diseaseC0020608","pred":"associated_with","subj":"21416598-4#195#200#gene8313","obj":"21416598-4#242#253#diseaseC0020608"},{"id":"195#200#gene8313242#253#diseaseC4082304","pred":"associated_with","subj":"21416598-4#195#200#gene8313","obj":"21416598-4#242#253#diseaseC4082304"}],"attributes":[{"subj":"21416598-4#164#169#gene8313","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"21416598-4#195#200#gene8313","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"21416598-4#76#87#diseaseC0020608","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"21416598-4#76#87#diseaseC4082304","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"21416598-4#242#253#diseaseC0020608","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"21416598-4#242#253#diseaseC4082304","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"21416598-4#242#253#diseaseC0020608","pred":"source","obj":"DisGeNET5_gene_disease"},{"subj":"21416598-4#242#253#diseaseC4082304","pred":"source","obj":"DisGeNET5_gene_disease"}]},{"project":"UBERON-AE","denotations":[{"id":"PD-UBERON-AE-B_T1","span":{"begin":36,"end":46},"obj":"http://purl.obolibrary.org/obo/UBERON_0000924"},{"id":"PD-UBERON-AE-B_T2","span":{"begin":296,"end":306},"obj":"http://purl.obolibrary.org/obo/UBERON_0000924"},{"id":"PD-UBERON-AE-B_T3","span":{"begin":1013,"end":1023},"obj":"http://purl.obolibrary.org/obo/UBERON_0000924"},{"id":"PD-UBERON-AE-B_T4","span":{"begin":254,"end":261},"obj":"http://purl.obolibrary.org/obo/UBERON_0001155"},{"id":"PD-UBERON-AE-B_T5","span":{"begin":348,"end":356},"obj":"http://purl.obolibrary.org/obo/UBERON_0010163"},{"id":"PD-UBERON-AE-B_T6","span":{"begin":389,"end":395},"obj":"http://purl.obolibrary.org/obo/UBERON_0000310"}],"attributes":[{"subj":"PD-UBERON-AE-B_T1","pred":"source","obj":"UBERON-AE"},{"subj":"PD-UBERON-AE-B_T2","pred":"source","obj":"UBERON-AE"},{"subj":"PD-UBERON-AE-B_T3","pred":"source","obj":"UBERON-AE"},{"subj":"PD-UBERON-AE-B_T4","pred":"source","obj":"UBERON-AE"},{"subj":"PD-UBERON-AE-B_T5","pred":"source","obj":"UBERON-AE"},{"subj":"PD-UBERON-AE-B_T6","pred":"source","obj":"UBERON-AE"}]},{"project":"PubCasesHPO","denotations":[{"id":"TI1","span":{"begin":36,"end":56},"obj":"HP:0000968"},{"id":"AB1","span":{"begin":204,"end":215},"obj":"HP:0000677"},{"id":"AB2","span":{"begin":296,"end":316},"obj":"HP:0000968"},{"id":"AB3","span":{"begin":332,"end":343},"obj":"HP:0008070"},{"id":"AB4","span":{"begin":744,"end":755},"obj":"HP:0000677"},{"id":"AB5","span":{"begin":910,"end":921},"obj":"HP:0000677"},{"id":"AB6","span":{"begin":1013,"end":1033},"obj":"HP:0000968"}],"attributes":[{"subj":"TI1","pred":"source","obj":"PubCasesHPO"},{"subj":"AB1","pred":"source","obj":"PubCasesHPO"},{"subj":"AB2","pred":"source","obj":"PubCasesHPO"},{"subj":"AB3","pred":"source","obj":"PubCasesHPO"},{"subj":"AB4","pred":"source","obj":"PubCasesHPO"},{"subj":"AB5","pred":"source","obj":"PubCasesHPO"},{"subj":"AB6","pred":"source","obj":"PubCasesHPO"}]},{"project":"PubCasesORDO","denotations":[{"id":"AB1","span":{"begin":204,"end":215},"obj":"ORDO:99798"},{"id":"AB2","span":{"begin":744,"end":755},"obj":"ORDO:99798"},{"id":"AB3","span":{"begin":910,"end":921},"obj":"ORDO:99798"}],"namespaces":[{"prefix":"ORDO","uri":"http://www.orpha.net/ORDO/Orphanet_"}],"attributes":[{"subj":"AB1","pred":"source","obj":"PubCasesORDO"},{"subj":"AB2","pred":"source","obj":"PubCasesORDO"},{"subj":"AB3","pred":"source","obj":"PubCasesORDO"}]},{"project":"performance-test","denotations":[{"id":"PD-UBERON-AE-B_T1","span":{"begin":36,"end":46},"obj":"http://purl.obolibrary.org/obo/UBERON_0000924"},{"id":"PD-UBERON-AE-B_T2","span":{"begin":296,"end":306},"obj":"http://purl.obolibrary.org/obo/UBERON_0000924"},{"id":"PD-UBERON-AE-B_T3","span":{"begin":1013,"end":1023},"obj":"http://purl.obolibrary.org/obo/UBERON_0000924"},{"id":"PD-UBERON-AE-B_T4","span":{"begin":389,"end":395},"obj":"http://purl.obolibrary.org/obo/UBERON_0000310"},{"id":"PD-UBERON-AE-B_T5","span":{"begin":254,"end":261},"obj":"http://purl.obolibrary.org/obo/UBERON_0001155"},{"id":"PD-UBERON-AE-B_T6","span":{"begin":348,"end":356},"obj":"http://purl.obolibrary.org/obo/UBERON_0010163"}],"attributes":[{"subj":"PD-UBERON-AE-B_T1","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T2","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T3","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T4","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T5","pred":"source","obj":"performance-test"},{"subj":"PD-UBERON-AE-B_T6","pred":"source","obj":"performance-test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"sentences","color":"#ce93ec","default":true},{"id":"DisGeNET","color":"#93ecb4"},{"id":"PubmedHPO","color":"#ec9993"},{"id":"Allie","color":"#93a6ec"},{"id":"DisGeNET5_gene_disease","color":"#c0ec93"},{"id":"UBERON-AE","color":"#ec93da"},{"id":"PubCasesHPO","color":"#93ece4"},{"id":"PubCasesORDO","color":"#ecca93"},{"id":"performance-test","color":"#b093ec"}]}]}}