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PubMed:21402705 JSONTXT

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Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 691-699 http://purl.obolibrary.org/obo/MAT_0000279 denotes placenta
T2 1365-1370 http://purl.obolibrary.org/obo/MAT_0000058 denotes urine
T3 1505-1510 http://purl.obolibrary.org/obo/MAT_0000488 denotes later

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-129 Sentence denotes Protocadherin-12 cleavage is a regulated process mediated by ADAM10 protein: evidence of shedding up-regulation in pre-eclampsia.
TextSentencer_T2 130-253 Sentence denotes Protocadherins are a group of transmembrane proteins with homophilic binding activity, members of the cadherin superfamily.
TextSentencer_T3 254-354 Sentence denotes Apart from their role in adhesion, the cellular functions of protocadherins are essentially unknown.
TextSentencer_T4 355-478 Sentence denotes Protocadherin (PCDH)12 was previously identified in invasive trophoblasts and endothelial and mesangial cells in the mouse.
TextSentencer_T5 479-573 Sentence denotes Invalidation studies revealed that the protein was required for optimal placental development.
TextSentencer_T6 574-741 Sentence denotes In this article, we show that its human homolog is abundantly expressed in various trophoblast subtypes of the human placenta and at lower levels in endothelial cells.
TextSentencer_T7 742-800 Sentence denotes We demonstrate that PCDH12 is shed at high rates in vitro.
TextSentencer_T8 801-909 Sentence denotes The shedding mechanism depends on ADAM10 and results in reduced cellular adhesion in a cell migration assay.
TextSentencer_T9 910-1034 Sentence denotes PCDH12 is subsequently cleaved by the γ-secretase complex, and its cytoplasmic domain is rapidly degraded by the proteasome.
TextSentencer_T10 1035-1204 Sentence denotes PCDH12 shedding is regulated by interlinked intracellular pathways, including those involving protein kinase C, PI3K, and cAMP, that either increase or inhibit cleavage.
TextSentencer_T11 1205-1292 Sentence denotes In endothelial cells, VEGF, prostaglandin E(2), or histamine regulates PCDH12 shedding.
TextSentencer_T12 1293-1423 Sentence denotes The extracellular domain of PCDH12 was also detected in human serum and urine, thus providing evidence of PCDH12 shedding in vivo.
TextSentencer_T13 1424-1632 Sentence denotes Importantly, we observed an increase in circulating PCDH12 in pregnant women who later developed a pre-eclampsia, a frequent pregnancy syndrome and a major cause of maternal and fetal morbidity and mortality.
TextSentencer_T14 1633-1877 Sentence denotes In conclusion, we speculate that, like in mice, PCDH12 may play an important role in human placental development and that proteolytic cleavage in response to external factors, such as cytokines and pathological settings, regulates its activity.
T1 0-129 Sentence denotes Protocadherin-12 cleavage is a regulated process mediated by ADAM10 protein: evidence of shedding up-regulation in pre-eclampsia.
T2 130-253 Sentence denotes Protocadherins are a group of transmembrane proteins with homophilic binding activity, members of the cadherin superfamily.
T3 254-354 Sentence denotes Apart from their role in adhesion, the cellular functions of protocadherins are essentially unknown.
T4 355-478 Sentence denotes Protocadherin (PCDH)12 was previously identified in invasive trophoblasts and endothelial and mesangial cells in the mouse.
T5 479-573 Sentence denotes Invalidation studies revealed that the protein was required for optimal placental development.
T6 574-741 Sentence denotes In this article, we show that its human homolog is abundantly expressed in various trophoblast subtypes of the human placenta and at lower levels in endothelial cells.
T7 742-800 Sentence denotes We demonstrate that PCDH12 is shed at high rates in vitro.
T8 801-909 Sentence denotes The shedding mechanism depends on ADAM10 and results in reduced cellular adhesion in a cell migration assay.
T9 910-1034 Sentence denotes PCDH12 is subsequently cleaved by the γ-secretase complex, and its cytoplasmic domain is rapidly degraded by the proteasome.
T10 1035-1204 Sentence denotes PCDH12 shedding is regulated by interlinked intracellular pathways, including those involving protein kinase C, PI3K, and cAMP, that either increase or inhibit cleavage.
T11 1205-1292 Sentence denotes In endothelial cells, VEGF, prostaglandin E(2), or histamine regulates PCDH12 shedding.
T12 1293-1423 Sentence denotes The extracellular domain of PCDH12 was also detected in human serum and urine, thus providing evidence of PCDH12 shedding in vivo.
T13 1424-1632 Sentence denotes Importantly, we observed an increase in circulating PCDH12 in pregnant women who later developed a pre-eclampsia, a frequent pregnancy syndrome and a major cause of maternal and fetal morbidity and mortality.
T14 1633-1877 Sentence denotes In conclusion, we speculate that, like in mice, PCDH12 may play an important role in human placental development and that proteolytic cleavage in response to external factors, such as cytokines and pathological settings, regulates its activity.

Allie

Id Subject Object Predicate Lexical cue
SS1_21402705_3_0 355-368 expanded denotes Protocadherin
SS2_21402705_3_0 370-374 abbr denotes PCDH
AE1_21402705_3_0 SS1_21402705_3_0 SS2_21402705_3_0 abbreviatedTo Protocadherin,PCDH

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 1523-1536 HP_0100602 denotes pre-eclampsia
T2 1527-1536 HP_0100601 denotes eclampsia

Preeclampsia

Id Subject Object Predicate Lexical cue
PD-Preeclampsia-B_T1 115-128 ORPHA:275555 denotes pre-eclampsia
PD-Preeclampsia-B_T2 1523-1536 ORPHA:275555 denotes pre-eclampsia

Preeclampsia-compare

Id Subject Object Predicate Lexical cue
PD-Preeclampsia-B_T1 115-128 ORPHA:275555 denotes pre-eclampsia
PD-Preeclampsia-B_T2 1523-1536 ORPHA:275555 denotes pre-eclampsia

UBERON-AE

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 416-428 http://purl.obolibrary.org/obo/UBERON_0000088 denotes trophoblasts
PD-UBERON-AE-B_T2 657-668 http://purl.obolibrary.org/obo/UBERON_0000088 denotes trophoblast
PD-UBERON-AE-B_T3 691-699 http://purl.obolibrary.org/obo/UBERON_0001987 denotes placenta
PD-UBERON-AE-B_T4 1355-1360 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum
PD-UBERON-AE-B_T5 1365-1370 http://purl.obolibrary.org/obo/UBERON_0001088 denotes urine

preeclampsia_genes

Id Subject Object Predicate Lexical cue
PD-PreeclampsiaGenes-B_T1 160-182 HGNC:TMEM2 denotes transmembrane proteins
PD-PreeclampsiaGenes-B_T2 160-182 HGNC:TMEM5 denotes transmembrane proteins

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 1355-1360 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum
PD-UBERON-AE-B_T2 416-428 http://purl.obolibrary.org/obo/UBERON_0000088 denotes trophoblasts
PD-UBERON-AE-B_T3 657-668 http://purl.obolibrary.org/obo/UBERON_0000088 denotes trophoblast
PD-UBERON-AE-B_T4 551-560 http://purl.obolibrary.org/obo/UBERON_0001987 denotes placental
PD-UBERON-AE-B_T5 691-699 http://purl.obolibrary.org/obo/UBERON_0001987 denotes placenta
PD-UBERON-AE-B_T6 1724-1733 http://purl.obolibrary.org/obo/UBERON_0001987 denotes placental
PD-UBERON-AE-B_T7 1365-1370 http://purl.obolibrary.org/obo/UBERON_0001088 denotes urine

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 115-128 Disease denotes pre-eclampsia http://purl.obolibrary.org/obo/MONDO_0005081
T2 1523-1536 Disease denotes pre-eclampsia http://purl.obolibrary.org/obo/MONDO_0005081

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 691-699 Body_part denotes placenta http://purl.obolibrary.org/obo/MAT_0000279
T2 1365-1370 Body_part denotes urine http://purl.obolibrary.org/obo/MAT_0000058
T3 1505-1510 Body_part denotes later http://purl.obolibrary.org/obo/MAT_0000488

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 472-477 OrganismTaxon denotes mouse 10088|10090
T3 608-613 OrganismTaxon denotes human 9606
T4 685-690 OrganismTaxon denotes human 9606
T5 1349-1354 OrganismTaxon denotes human 9606
T6 1675-1679 OrganismTaxon denotes mice 10088
T7 1718-1723 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 160-173 Body_part denotes transmembrane http://purl.obolibrary.org/obo/GO_0016020
T2 416-428 Body_part denotes trophoblasts http://purl.obolibrary.org/obo/UBERON_0000088
T3 449-464 Body_part denotes mesangial cells http://purl.obolibrary.org/obo/CL_0000650|http://purl.obolibrary.org/obo/CL_0000777
T5 657-668 Body_part denotes trophoblast http://purl.obolibrary.org/obo/UBERON_0000088
T6 691-699 Body_part denotes placenta http://purl.obolibrary.org/obo/UBERON_0001987
T7 723-740 Body_part denotes endothelial cells http://purl.obolibrary.org/obo/CL_0000115
T8 977-988 Body_part denotes cytoplasmic http://purl.obolibrary.org/obo/GO_0005737
T9 1079-1092 Body_part denotes intracellular http://purl.obolibrary.org/obo/GO_0005622
T10 1208-1225 Body_part denotes endothelial cells http://purl.obolibrary.org/obo/CL_0000115
T11 1297-1310 Body_part denotes extracellular http://purl.obolibrary.org/obo/GO_0005576
T12 1365-1370 Body_part denotes urine http://purl.obolibrary.org/obo/UBERON_0001088

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 449-464 Cell denotes mesangial cells http://purl.obolibrary.org/obo/CL:0000650|http://purl.obolibrary.org/obo/CL:0000777
T3 723-740 Cell denotes endothelial cells http://purl.obolibrary.org/obo/CL:0000115
T4 1208-1225 Cell denotes endothelial cells http://purl.obolibrary.org/obo/CL:0000115