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PubMed:2137613 JSONTXT

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OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 48-61 http://identifiers.org/oryzabase.gene/8408 denotes abscisic acid
T2 189-202 http://identifiers.org/oryzabase.gene/8408 denotes abscisic acid
T3 204-207 http://identifiers.org/oryzabase.gene/6003 denotes ABA
T4 204-207 http://identifiers.org/oryzabase.gene/8408 denotes ABA
T5 385-388 http://identifiers.org/oryzabase.gene/6003 denotes ABA
T6 385-388 http://identifiers.org/oryzabase.gene/8408 denotes ABA
T7 608-611 http://identifiers.org/oryzabase.gene/6003 denotes ABA
T8 608-611 http://identifiers.org/oryzabase.gene/8408 denotes ABA
T9 850-853 http://identifiers.org/oryzabase.gene/6003 denotes ABA
T10 850-853 http://identifiers.org/oryzabase.gene/8408 denotes ABA
T69548 48-61 http://identifiers.org/ricegap/LOC_Os11g06720 denotes abscisic acid
T83561 163-170 http://identifiers.org/ricegap/LOC_Os11g26790 denotes rab-16A
T25182 189-202 http://identifiers.org/ricegap/LOC_Os11g06720 denotes abscisic acid
T56197 204-207 http://identifiers.org/ricegap/LOC_Os11g06720 denotes ABA
T3915 204-207 http://identifiers.org/ricegap/LOC_Os04g34600 denotes ABA
T45042 204-207 http://identifiers.org/ricegap/LOC_Os02g33820 denotes ABA
T19799 204-207 http://identifiers.org/ricegap/LOC_Os01g73250 denotes ABA
T90990 204-207 http://identifiers.org/ricegap/LOC_Os01g72910 denotes ABA
T42897 204-207 http://identifiers.org/ricegap/LOC_Os01g72900 denotes ABA
T26194 385-388 http://identifiers.org/ricegap/LOC_Os11g06720 denotes ABA
T11 385-388 http://identifiers.org/ricegap/LOC_Os04g34600 denotes ABA
T12 385-388 http://identifiers.org/ricegap/LOC_Os02g33820 denotes ABA
T13 385-388 http://identifiers.org/ricegap/LOC_Os01g73250 denotes ABA
T14 385-388 http://identifiers.org/ricegap/LOC_Os01g72910 denotes ABA
T15 385-388 http://identifiers.org/ricegap/LOC_Os01g72900 denotes ABA
T16 542-549 http://identifiers.org/ricegap/LOC_Os11g26790 denotes rab-16A
T17 608-611 http://identifiers.org/ricegap/LOC_Os11g06720 denotes ABA
T18 608-611 http://identifiers.org/ricegap/LOC_Os04g34600 denotes ABA
T19 608-611 http://identifiers.org/ricegap/LOC_Os02g33820 denotes ABA
T20 608-611 http://identifiers.org/ricegap/LOC_Os01g73250 denotes ABA
T21 608-611 http://identifiers.org/ricegap/LOC_Os01g72910 denotes ABA
T22 608-611 http://identifiers.org/ricegap/LOC_Os01g72900 denotes ABA
T23 850-853 http://identifiers.org/ricegap/LOC_Os11g06720 denotes ABA
T24 850-853 http://identifiers.org/ricegap/LOC_Os04g34600 denotes ABA
T25 850-853 http://identifiers.org/ricegap/LOC_Os02g33820 denotes ABA
T26 850-853 http://identifiers.org/ricegap/LOC_Os01g73250 denotes ABA
T27 850-853 http://identifiers.org/ricegap/LOC_Os01g72910 denotes ABA
T28 850-853 http://identifiers.org/ricegap/LOC_Os01g72900 denotes ABA
T110 48-61 http://identifiers.org/rapdb.locus/Os11g0167800 denotes abscisic acid
T82561 163-170 http://identifiers.org/rapdb.locus/Os11g0454300 denotes rab-16A
T98261 189-202 http://identifiers.org/rapdb.locus/Os11g0167800 denotes abscisic acid
T6541 204-207 http://identifiers.org/rapdb.locus/Os11g0167800 denotes ABA
T96874 204-207 http://identifiers.org/rapdb.locus/Os04g0423400 denotes ABA
T47194 204-207 http://identifiers.org/rapdb.locus/Os02g0543000 denotes ABA
T96579 204-207 http://identifiers.org/rapdb.locus/Os01g0963600 denotes ABA
T50601 204-207 http://identifiers.org/rapdb.locus/Os01g0959200 denotes ABA
T48879 204-207 http://identifiers.org/rapdb.locus/Os01g0959100 denotes ABA
T25924 385-388 http://identifiers.org/rapdb.locus/Os11g0167800 denotes ABA
T37593 385-388 http://identifiers.org/rapdb.locus/Os04g0423400 denotes ABA
T70830 385-388 http://identifiers.org/rapdb.locus/Os02g0543000 denotes ABA
T107 385-388 http://identifiers.org/rapdb.locus/Os01g0963600 denotes ABA
T19996 385-388 http://identifiers.org/rapdb.locus/Os01g0959200 denotes ABA
T82035 385-388 http://identifiers.org/rapdb.locus/Os01g0959100 denotes ABA
T63540 542-549 http://identifiers.org/rapdb.locus/Os11g0454300 denotes rab-16A
T53682 608-611 http://identifiers.org/rapdb.locus/Os11g0167800 denotes ABA
T76874 608-611 http://identifiers.org/rapdb.locus/Os04g0423400 denotes ABA
T29105 608-611 http://identifiers.org/rapdb.locus/Os02g0543000 denotes ABA
T76082 608-611 http://identifiers.org/rapdb.locus/Os01g0963600 denotes ABA
T97877 608-611 http://identifiers.org/rapdb.locus/Os01g0959200 denotes ABA
T38744 608-611 http://identifiers.org/rapdb.locus/Os01g0959100 denotes ABA
T27033 850-853 http://identifiers.org/rapdb.locus/Os11g0167800 denotes ABA
T33192 850-853 http://identifiers.org/rapdb.locus/Os04g0423400 denotes ABA
T55177 850-853 http://identifiers.org/rapdb.locus/Os02g0543000 denotes ABA
T7427 850-853 http://identifiers.org/rapdb.locus/Os01g0963600 denotes ABA
T51082 850-853 http://identifiers.org/rapdb.locus/Os01g0959200 denotes ABA
T90626 850-853 http://identifiers.org/rapdb.locus/Os01g0959100 denotes ABA
T73374 48-61 http://identifiers.org/uniprot/Q53JF7 denotes abscisic acid
T27441 189-202 http://identifiers.org/uniprot/Q53JF7 denotes abscisic acid
T53238 204-207 http://identifiers.org/uniprot/Q53JF7 denotes ABA
T46116 385-388 http://identifiers.org/uniprot/Q53JF7 denotes ABA
T9728 608-611 http://identifiers.org/uniprot/Q53JF7 denotes ABA
T72084 850-853 http://identifiers.org/uniprot/Q53JF7 denotes ABA
M_0 249-274 hunflair:NA:CellLine denotes cultured suspension cells
M_1 204-207 hunflair:NA:Chemical denotes ABA
M_2 385-388 hunflair:NA:Chemical denotes ABA
M_3 608-611 hunflair:NA:Chemical denotes ABA
M_4 850-853 hunflair:NA:Chemical denotes ABA
M_5 675-689 hunflair:NA:Gene denotes nuclear factor
M_6 417-432 hunflair:NA:Chemical denotes chloramphenicol
M_7 92-95 hunflair:NA:Gene denotes rab
M_8 163-166 hunflair:NA:Gene denotes rab
M_9 542-545 hunflair:NA:Gene denotes rab
M_10 811-814 hunflair:NA:Gene denotes rab
M_11 417-464 hunflair:NA:Gene denotes chloramphenicol acetyltransferase reporter gene
M_12 650-657 hunflair:NA:Gene denotes DNAse I
M_13 48-61 hunflair:NA:Chemical denotes abscisic acid
M_14 189-202 hunflair:NA:Chemical denotes abscisic acid
M_15 87-91 hunflair:NA:Species denotes rice
M_16 152-156 hunflair:NA:Species denotes rice
M_17 468-472 hunflair:NA:Species denotes rice
M_18 163-170 hunflair:NA:Gene denotes rab-16A
M_19 542-549 hunflair:NA:Gene denotes rab-16A

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 163-170 http://identifiers.org/oryzabase.gene/6385 denotes rab-16A
T2 204-207 http://identifiers.org/oryzabase.gene/6003 denotes ABA
T3 385-388 http://identifiers.org/oryzabase.gene/6003 denotes ABA
T4 542-549 http://identifiers.org/oryzabase.gene/6385 denotes rab-16A
T5 608-611 http://identifiers.org/oryzabase.gene/6003 denotes ABA
T6 850-853 http://identifiers.org/oryzabase.gene/6003 denotes ABA
T26975 163-170 http://identifiers.org/rapdb.locus/Os11g0454300 denotes rab-16A
T34478 542-549 http://identifiers.org/rapdb.locus/Os11g0454300 denotes rab-16A

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 249-274 hunflair:NA:CellLine denotes cultured suspension cells
M_1 204-207 hunflair:NA:Chemical denotes ABA
M_2 385-388 hunflair:NA:Chemical denotes ABA
M_3 608-611 hunflair:NA:Chemical denotes ABA
M_4 850-853 hunflair:NA:Chemical denotes ABA
M_5 675-689 hunflair:NA:Gene denotes nuclear factor
M_6 417-432 hunflair:NA:Chemical denotes chloramphenicol
M_7 92-95 hunflair:NA:Gene denotes rab
M_8 163-166 hunflair:NA:Gene denotes rab
M_9 542-545 hunflair:NA:Gene denotes rab
M_10 811-814 hunflair:NA:Gene denotes rab
M_11 417-464 hunflair:NA:Gene denotes chloramphenicol acetyltransferase reporter gene
M_12 650-657 hunflair:NA:Gene denotes DNAse I
M_13 48-61 hunflair:NA:Chemical denotes abscisic acid
M_14 189-202 hunflair:NA:Chemical denotes abscisic acid
M_15 87-91 hunflair:NA:Species denotes rice
M_16 152-156 hunflair:NA:Species denotes rice
M_17 468-472 hunflair:NA:Species denotes rice
M_18 163-170 hunflair:NA:Gene denotes rab-16A
M_19 542-549 hunflair:NA:Gene denotes rab-16A

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-101 Sentence denotes Nuclear proteins bind conserved elements in the abscisic acid-responsive promoter of a rice rab gene.
T2 102-275 Sentence denotes We have previously shown that the expression of a rice gene, rab-16A, is responsive to abscisic acid (ABA) and osmotic stress in plant tissues and cultured suspension cells.
T3 276-485 Sentence denotes We demonstrate here that transcriptional elements between -294 and -52 of this gene are sufficient to confer ABA-dependent expression on the chloramphenicol acetyltransferase reporter gene in rice protoplasts.
T4 486-629 Sentence denotes Sequence motifs within this 242-base-pair region of the rab-16A gene are conserved among the 5' upstream regions of other ABA-responsive genes.
T5 630-720 Sentence denotes Gel retardation and DNAse I experiments show nuclear factor(s) binding to these sequences.
T6 721-882 Sentence denotes This correlative data indicate that these motifs are involved in the transcription of the rab genes and suggest that they may be ABA-responsive-elements (ABREs).