> top > docs > PubMed:2136633 > annotations

PubMed:2136633 JSONTXT

Annnotations TAB JSON ListView MergeView

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 26-31 http://identifiers.org/oryzabase.gene/17716 denotes actin
T2 121-128 http://identifiers.org/oryzabase.gene/519 denotes actin 1
T92523 26-31 http://identifiers.org/ricegap/LOC_Os11g06390 denotes actin
T32869 121-128 http://identifiers.org/ricegap/LOC_Os03g50885 denotes actin 1
T3 135-139 http://identifiers.org/ricegap/LOC_Os03g50885 denotes Act1
T4 319-323 http://identifiers.org/ricegap/LOC_Os03g50885 denotes Act1
T5 466-470 http://identifiers.org/ricegap/LOC_Os03g50885 denotes Act1
T6 666-670 http://identifiers.org/ricegap/LOC_Os03g50885 denotes Act1
T7 787-791 http://identifiers.org/ricegap/LOC_Os03g50885 denotes Act1
T8 911-915 http://identifiers.org/ricegap/LOC_Os03g50885 denotes Act1
T38159 26-31 http://identifiers.org/rapdb.locus/Os11g0163100 denotes actin
T52292 121-128 http://identifiers.org/rapdb.locus/Os03g0718100 denotes actin 1
T32920 135-139 http://identifiers.org/rapdb.locus/Os03g0718100 denotes Act1
T7894 319-323 http://identifiers.org/rapdb.locus/Os03g0718100 denotes Act1
T96442 466-470 http://identifiers.org/rapdb.locus/Os03g0718100 denotes Act1
T63282 666-670 http://identifiers.org/rapdb.locus/Os03g0718100 denotes Act1
T46948 787-791 http://identifiers.org/rapdb.locus/Os03g0718100 denotes Act1
T17026 911-915 http://identifiers.org/rapdb.locus/Os03g0718100 denotes Act1
T97908 121-128 http://identifiers.org/uniprot/Q10DV7 denotes actin 1
M_0 26-40 hunflair:NA:Gene denotes actin promoter
M_1 377-386 hunflair:NA:Species denotes bacterial
M_2 387-405 hunflair:NA:Gene denotes beta-glucuronidase
M_3 568-586 hunflair:NA:Gene denotes beta-glucuronidase
M_4 116-133 hunflair:NA:Gene denotes rice actin 1 gene
M_5 52-56 hunflair:NA:Species denotes rice
M_6 116-120 hunflair:NA:Species denotes rice
M_7 258-262 hunflair:NA:Species denotes rice
M_8 314-318 hunflair:NA:Species denotes rice
M_9 639-643 hunflair:NA:Species denotes rice
M_10 661-665 hunflair:NA:Species denotes rice
M_11 868-872 hunflair:NA:Species denotes rice
M_12 588-591 hunflair:NA:Gene denotes GUS
M_13 820-823 hunflair:NA:Gene denotes GUS
M_14 975-978 hunflair:NA:Gene denotes GUS
M_15 135-139 hunflair:NA:Gene denotes Act1
M_16 319-323 hunflair:NA:Gene denotes Act1
M_17 466-470 hunflair:NA:Gene denotes Act1
M_18 666-670 hunflair:NA:Gene denotes Act1
M_19 787-791 hunflair:NA:Gene denotes Act1
M_20 911-915 hunflair:NA:Gene denotes Act1

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 26-31 http://identifiers.org/oryzabase.gene/17716 denotes actin
T2 121-128 http://identifiers.org/oryzabase.gene/519 denotes actin 1

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 135-139 http://identifiers.org/oryzabase.gene/519 denotes Act1
T2 319-323 http://identifiers.org/oryzabase.gene/519 denotes Act1
T3 466-470 http://identifiers.org/oryzabase.gene/519 denotes Act1
T4 666-670 http://identifiers.org/oryzabase.gene/519 denotes Act1
T5 787-791 http://identifiers.org/oryzabase.gene/519 denotes Act1
T6 911-915 http://identifiers.org/oryzabase.gene/519 denotes Act1
T86217 135-139 http://identifiers.org/rapdb.locus/Os03g0718100 denotes Act1
T93397 319-323 http://identifiers.org/rapdb.locus/Os03g0718100 denotes Act1
T10198 466-470 http://identifiers.org/rapdb.locus/Os03g0718100 denotes Act1
T21103 666-670 http://identifiers.org/rapdb.locus/Os03g0718100 denotes Act1
T61837 787-791 http://identifiers.org/rapdb.locus/Os03g0718100 denotes Act1
T97724 911-915 http://identifiers.org/rapdb.locus/Os03g0718100 denotes Act1

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 26-40 hunflair:NA:Gene denotes actin promoter
M_1 377-386 hunflair:NA:Species denotes bacterial
M_2 387-405 hunflair:NA:Gene denotes beta-glucuronidase
M_3 568-586 hunflair:NA:Gene denotes beta-glucuronidase
M_4 116-133 hunflair:NA:Gene denotes rice actin 1 gene
M_5 52-56 hunflair:NA:Species denotes rice
M_6 116-120 hunflair:NA:Species denotes rice
M_7 258-262 hunflair:NA:Species denotes rice
M_8 314-318 hunflair:NA:Species denotes rice
M_9 639-643 hunflair:NA:Species denotes rice
M_10 661-665 hunflair:NA:Species denotes rice
M_11 868-872 hunflair:NA:Species denotes rice
M_12 588-591 hunflair:NA:Gene denotes GUS
M_13 820-823 hunflair:NA:Gene denotes GUS
M_14 975-978 hunflair:NA:Gene denotes GUS
M_15 135-139 hunflair:NA:Gene denotes Act1
M_16 319-323 hunflair:NA:Gene denotes Act1
M_17 466-470 hunflair:NA:Gene denotes Act1
M_18 666-670 hunflair:NA:Gene denotes Act1
M_19 787-791 hunflair:NA:Gene denotes Act1
M_20 911-915 hunflair:NA:Gene denotes Act1

OryzaGP

Id Subject Object Predicate Lexical cue
T1 121-128 gene denotes actin 1

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-72 Sentence denotes Isolation of an efficient actin promoter for use in rice transformation.
T2 73-263 Sentence denotes We have characterized the 5' region of the rice actin 1 gene (Act1) and show that it is an efficient promoter for regulating the constitutive expression of a foreign gene in transgenic rice.
T3 264-656 Sentence denotes By constructing plasmids with 5' regions from the rice Act1 gene fused to the coding sequence of a gene encoding bacterial beta-glucuronidase, we demonstrate that a region 1.3 kilobases upstream of the Act1 translation initiation codon contains all of the 5'-regulatory elements necessary for high-level beta-glucuronidase (GUS) expression in transient assays of transformed rice protoplasts.
T4 657-763 Sentence denotes The rice Act1 primary transcript has a noncoding exon separated by a 5' intron from the first coding exon.
T5 764-885 Sentence denotes Fusions that lack this Act1 intron showed no detectable GUS activity in transient assays of transformed rice protoplasts.
T6 886-1072 Sentence denotes Deletion analysis of the Act1 5' intron suggests that the intron-mediated stimulation of GUS expression is associated, in part, with an in vivo requirement for efficient intron splicing.