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PubMed:21321053 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 689-713 https://glytoucan.org/Structures/Glycans/G61418DU denotes N-acetyl-d-galactosamine

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 689-713 Glycan_Motif denotes N-acetyl-d-galactosamine https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G61418DU

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 689-713 https://glytoucan.org/Structures/Glycans/G61418DU denotes N-acetyl-d-galactosamine

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-181 Sentence denotes The genetics and structure of the O-specific polysaccharide of Yersinia pseudotuberculosis serotype O:10 and its relationship with Escherichia coli O111 and Salmonella enterica O35.
TextSentencer_T2 182-296 Sentence denotes The O-specific polysaccharide (OPS) is a variable constituent of the lipopolysaccharide of Gram-negative bacteria.
TextSentencer_T3 297-543 Sentence denotes The polymorphic nature of OPSs within a species is usually first defined serologically, and the current serotyping scheme for Yersinia pseudotuberculosis consists of 21 O serotypes of which 15 have been characterized genetically and structurally.
TextSentencer_T4 544-626 Sentence denotes Here, we present the structure and DNA sequence of Y. pseudotuberculosis O:10 OPS.
TextSentencer_T5 627-860 Sentence denotes The O unit consists of one residue each of d-galactopyranose, N-acetyl-d-galactosamine (2-amino-2-deoxy-d-galactopyranose) and d-glucopyranose in the backbone, with two colitose (3,6-dideoxy-l-xylo-hexopyranose) side-branch residues.
TextSentencer_T6 861-960 Sentence denotes This structure is very similar to that shared by Escherichia coli O111 and Salmonella enterica O35.
TextSentencer_T7 961-1148 Sentence denotes The gene cluster sequences of these serotypes, however, have only low levels of similarity to that of Y. pseudotuberculosis O:10, although there is significant conservation of gene order.
TextSentencer_T8 1149-1251 Sentence denotes Within Y. pseudotuberculosis, the O10 structure is most closely related to the O:6 and O:7 structures.
T1 0-181 Sentence denotes The genetics and structure of the O-specific polysaccharide of Yersinia pseudotuberculosis serotype O:10 and its relationship with Escherichia coli O111 and Salmonella enterica O35.
T2 182-296 Sentence denotes The O-specific polysaccharide (OPS) is a variable constituent of the lipopolysaccharide of Gram-negative bacteria.
T3 297-543 Sentence denotes The polymorphic nature of OPSs within a species is usually first defined serologically, and the current serotyping scheme for Yersinia pseudotuberculosis consists of 21 O serotypes of which 15 have been characterized genetically and structurally.
T4 544-626 Sentence denotes Here, we present the structure and DNA sequence of Y. pseudotuberculosis O:10 OPS.
T5 627-860 Sentence denotes The O unit consists of one residue each of d-galactopyranose, N-acetyl-d-galactosamine (2-amino-2-deoxy-d-galactopyranose) and d-glucopyranose in the backbone, with two colitose (3,6-dideoxy-l-xylo-hexopyranose) side-branch residues.
T6 861-960 Sentence denotes This structure is very similar to that shared by Escherichia coli O111 and Salmonella enterica O35.
T7 961-1148 Sentence denotes The gene cluster sequences of these serotypes, however, have only low levels of similarity to that of Y. pseudotuberculosis O:10, although there is significant conservation of gene order.
T8 1149-1251 Sentence denotes Within Y. pseudotuberculosis, the O10 structure is most closely related to the O:6 and O:7 structures.
T1 0-181 Sentence denotes The genetics and structure of the O-specific polysaccharide of Yersinia pseudotuberculosis serotype O:10 and its relationship with Escherichia coli O111 and Salmonella enterica O35.
T2 182-296 Sentence denotes The O-specific polysaccharide (OPS) is a variable constituent of the lipopolysaccharide of Gram-negative bacteria.
T3 297-543 Sentence denotes The polymorphic nature of OPSs within a species is usually first defined serologically, and the current serotyping scheme for Yersinia pseudotuberculosis consists of 21 O serotypes of which 15 have been characterized genetically and structurally.
T4 544-626 Sentence denotes Here, we present the structure and DNA sequence of Y. pseudotuberculosis O:10 OPS.
T5 627-860 Sentence denotes The O unit consists of one residue each of d-galactopyranose, N-acetyl-d-galactosamine (2-amino-2-deoxy-d-galactopyranose) and d-glucopyranose in the backbone, with two colitose (3,6-dideoxy-l-xylo-hexopyranose) side-branch residues.
T6 861-960 Sentence denotes This structure is very similar to that shared by Escherichia coli O111 and Salmonella enterica O35.
T7 961-1148 Sentence denotes The gene cluster sequences of these serotypes, however, have only low levels of similarity to that of Y. pseudotuberculosis O:10, although there is significant conservation of gene order.
T8 1149-1251 Sentence denotes Within Y. pseudotuberculosis, the O10 structure is most closely related to the O:6 and O:7 structures.

GlycoBiology-PACDB

Id Subject Object Predicate Lexical cue
_T1 131-147 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC002,LEC056,LEC062,LEC069,LEC081,LEC111,LEC133,LEC171,LEC177,LEC187,LEC211,LEC242,LEC252,LEC258,LEC259,LEC260,LEC262,LEC369,LEC377,LEC422,LEC442,LEC448,LEC450,LEC451,LEC454,LEC472,LEC492,LEC620 denotes Escherichia coli
_T2 131-147 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC487 denotes Escherichia coli
_T3 131-147 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC157,LEC407 denotes Escherichia coli
_T4 131-147 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC636 denotes Escherichia coli
_T5 131-147 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC243,LEC640 denotes Escherichia coli
_T6 131-147 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC054,LEC058,LEC073,LEC082,LEC091,LEC103,LEC109,LEC110,LEC123,LEC158,LEC179,LEC198,LEC205,LEC222,LEC223,LEC224,LEC225,LEC232,LEC298,LEC357,LEC378,LEC383,LEC388,LEC389,LEC397,LEC401,LEC410,LEC452 denotes Escherichia coli
_T7 131-147 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC244,LEC256,LEC354 denotes Escherichia coli
_T8 131-147 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC754 denotes Escherichia coli
_T9 131-152 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC263,LEC665 denotes Escherichia coli O111
_T10 131-152 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC324 denotes Escherichia coli O111
_T11 131-152 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC295,LEC417 denotes Escherichia coli O111
_T12 131-152 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC636 denotes Escherichia coli O111
_T13 131-152 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC267,LEC475 denotes Escherichia coli O111
_T14 157-176 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC743 denotes Salmonella enterica
_T15 910-926 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC157,LEC407 denotes Escherichia coli
_T16 910-926 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC002,LEC056,LEC062,LEC069,LEC081,LEC111,LEC133,LEC171,LEC177,LEC187,LEC211,LEC242,LEC252,LEC258,LEC259,LEC260,LEC262,LEC369,LEC377,LEC422,LEC442,LEC448,LEC450,LEC451,LEC454,LEC472,LEC492,LEC620 denotes Escherichia coli
_T17 910-926 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC243,LEC640 denotes Escherichia coli
_T18 910-926 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC636 denotes Escherichia coli
_T19 910-926 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC754 denotes Escherichia coli
_T20 910-926 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC054,LEC058,LEC073,LEC082,LEC091,LEC103,LEC109,LEC110,LEC123,LEC158,LEC179,LEC198,LEC205,LEC222,LEC223,LEC224,LEC225,LEC232,LEC298,LEC357,LEC378,LEC383,LEC388,LEC389,LEC397,LEC401,LEC410,LEC452 denotes Escherichia coli
_T21 910-926 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC487 denotes Escherichia coli
_T22 910-926 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC244,LEC256,LEC354 denotes Escherichia coli
_T23 910-931 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC324 denotes Escherichia coli O111
_T24 910-931 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC267,LEC475 denotes Escherichia coli O111
_T25 910-931 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC295,LEC417 denotes Escherichia coli O111
_T26 910-931 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC636 denotes Escherichia coli O111
_T27 910-931 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC263,LEC665 denotes Escherichia coli O111
_T28 936-955 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC743 denotes Salmonella enterica

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 45-59 FMAID:82785 denotes polysaccharide
_T2 45-59 FMAID:82746 denotes polysaccharide
_T3 45-59 FMAID:196735 denotes polysaccharide
_T4 45-59 FMAID:196779 denotes polysaccharide
_T5 109-125 FMAID:50626 denotes its relationship
_T6 109-125 FMAID:165104 denotes its relationship
_T7 197-211 FMAID:82785 denotes polysaccharide
_T8 197-211 FMAID:82746 denotes polysaccharide
_T9 197-211 FMAID:196735 denotes polysaccharide
_T10 197-211 FMAID:196779 denotes polysaccharide
_T11 251-269 FMAID:196779 denotes lipopolysaccharide
_T12 251-269 FMAID:196735 denotes lipopolysaccharide
_T13 251-269 FMAID:82785 denotes lipopolysaccharide
_T14 251-269 FMAID:82746 denotes lipopolysaccharide
_T15 700-713 FMAID:196787 denotes galactosamine
_T16 700-713 FMAID:82792 denotes galactosamine
_T17 777-785 FMAID:102867 denotes backbone
_T18 844-850 FMAID:226027 denotes branch
_T19 844-850 FMAID:226028 denotes branch
_T20 965-969 FMAID:198663 denotes gene
_T21 965-977 FMAID:198017 denotes gene cluster
_T22 965-977 FMAID:84082 denotes gene cluster
_T23 1137-1141 FMAID:198663 denotes gene

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 63-71 http://purl.bioontology.org/ontology/NCBITAXON/444888 denotes Yersinia
T2 131-142 http://purl.bioontology.org/ontology/NCBITAXON/561 denotes Escherichia
T3 157-167 http://purl.bioontology.org/ontology/NCBITAXON/590 denotes Salmonella
T4 273-295 http://purl.bioontology.org/ontology/NCBITAXON/130804 denotes Gram-negative bacteria
T5 273-295 http://purl.bioontology.org/ontology/NCBITAXON/130805 denotes Gram-negative bacteria
T6 287-295 http://purl.bioontology.org/ontology/NCBITAXON/2 denotes bacteria
T7 287-295 http://purl.bioontology.org/ontology/NCBITAXON/629395 denotes bacteria
T8 301-312 http://purl.bioontology.org/ontology/NCBITAXON/991903 denotes polymorphic
T9 301-312 http://purl.bioontology.org/ontology/NCBITAXON/60540 denotes polymorphic
T10 423-431 http://purl.bioontology.org/ontology/NCBITAXON/444888 denotes Yersinia
T11 910-921 http://purl.bioontology.org/ontology/NCBITAXON/561 denotes Escherichia
T12 936-946 http://purl.bioontology.org/ontology/NCBITAXON/590 denotes Salmonella
T13 1213-1220 http://purl.bioontology.org/ontology/NCBITAXON/353209 denotes related

Allie

Id Subject Object Predicate Lexical cue
SS1_21321053_1_0 186-211 expanded denotes O-specific polysaccharide
SS2_21321053_1_0 213-216 abbr denotes OPS
AE1_21321053_1_0 SS1_21321053_1_0 SS2_21321053_1_0 abbreviatedTo O-specific polysaccharide,OPS

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 72-90 Disease denotes pseudotuberculosis http://purl.obolibrary.org/obo/MONDO_0007024
T2 432-450 Disease denotes pseudotuberculosis http://purl.obolibrary.org/obo/MONDO_0007024
T3 598-616 Disease denotes pseudotuberculosis http://purl.obolibrary.org/obo/MONDO_0007024
T4 1066-1084 Disease denotes pseudotuberculosis http://purl.obolibrary.org/obo/MONDO_0007024
T5 1159-1177 Disease denotes pseudotuberculosis http://purl.obolibrary.org/obo/MONDO_0007024

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 63-90 OrganismTaxon denotes Yersinia pseudotuberculosis 633
T2 131-147 OrganismTaxon denotes Escherichia coli 562
T3 157-176 OrganismTaxon denotes Salmonella enterica 28901
T4 287-295 OrganismTaxon denotes bacteria 2|629395
T6 423-450 OrganismTaxon denotes Yersinia pseudotuberculosis 633
T7 910-926 OrganismTaxon denotes Escherichia coli 562
T8 936-955 OrganismTaxon denotes Salmonella enterica 28901

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 777-785 Body_part denotes backbone http://purl.obolibrary.org/obo/UBERON_0001130