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PubMed:21219851 / 183-331 JSONTXT

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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T2 0-148 Sentence denotes Ehlers-Danlos syndrome, vascular type (vEDS) (MIM #130050) is an autosomal dominant disorder caused by type III procollagen gene (COL3A1) mutations.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
8482 0-37 DiseaseOrPhenotypicFeature denotes Ehlers-Danlos syndrome, vascular type MESH:D004535
8483 39-43 DiseaseOrPhenotypicFeature denotes vEDS MESH:D004535
8484 46-57 DiseaseOrPhenotypicFeature denotes MIM #130050 MESH:D004535
8485 65-92 DiseaseOrPhenotypicFeature denotes autosomal dominant disorder MESH:D030342
8486 103-123 GeneOrGeneProduct denotes type III procollagen NCBIGene:1281
8487 130-136 GeneOrGeneProduct denotes COL3A1 NCBIGene:1281

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T2 0-37 DiseaseOrPhenotypicFeature denotes Ehlers-Danlos syndrome, vascular type 0017314
T3 0-22 DiseaseOrPhenotypicFeature denotes Ehlers-Danlos syndrome 0020066

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T8 14-22 GeneOrGeneProduct denotes syndrome
T9 108-111 GeneOrGeneProduct denotes III
T10 112-123 GeneOrGeneProduct denotes procollagen
T11 130-136 GeneOrGeneProduct denotes COL3A1
T12 138-147 GeneOrGeneProduct denotes mutations

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T5 14-22 GeneOrGeneProduct denotes syndrome
T6 112-123 GeneOrGeneProduct denotes procollagen
T7 130-136 GeneOrGeneProduct denotes COL3A1

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T2 0-37 DiseaseOrPhenotypicFeature denotes Ehlers-Danlos syndrome, vascular type D004535
T3 65-92 DiseaseOrPhenotypicFeature denotes autosomal dominant disorder DISEASE

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 112-123 GeneOrGeneProduct denotes procollagen
T2 130-136 GeneOrGeneProduct denotes COL3A1

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T3 0-37 DiseaseOrPhenotypicFeature denotes Ehlers-Danlos syndrome, vascular type 0017314|0007524
T5 39-43 DiseaseOrPhenotypicFeature denotes vEDS 0017314

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T2 0-37 DiseaseOrPhenotypicFeature denotes Ehlers-Danlos syndrome, vascular type D004535
T3 39-43 DiseaseOrPhenotypicFeature denotes vEDS DISEASE
T4 46-57 DiseaseOrPhenotypicFeature denotes MIM #130050 DISEASE
T5 65-92 DiseaseOrPhenotypicFeature denotes autosomal dominant disorder DISEASE

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T2 0-37 DiseaseOrPhenotypicFeature denotes Ehlers-Danlos syndrome, vascular type D004535
T3 39-43 DiseaseOrPhenotypicFeature denotes vEDS DISEASE
T4 46-57 DiseaseOrPhenotypicFeature denotes MIM #130050 DISEASE
T5 65-92 DiseaseOrPhenotypicFeature denotes autosomal dominant disorder DISEASE

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label
T55142 130-136 GeneOrGeneProduct denotes COL3A1
T57369 112-123 GeneOrGeneProduct denotes procollagen
T32104 65-92 DiseaseOrPhenotypicFeature denotes autosomal dominant disorder DISEASE
T35010 46-57 DiseaseOrPhenotypicFeature denotes MIM #130050 DISEASE
T37080 39-43 DiseaseOrPhenotypicFeature denotes vEDS DISEASE
T64173 0-37 DiseaseOrPhenotypicFeature denotes Ehlers-Danlos syndrome, vascular type D004535

DisGeNET

Id Subject Object Predicate Lexical cue
T0 130-136 gene:1281 denotes COL3A1
T1 0-37 disease:C0268338 denotes Ehlers-Danlos syndrome, vascular type
T2 130-136 gene:1281 denotes COL3A1
T3 39-43 disease:C0268338 denotes vEDS
R1 T0 T1 associated_with COL3A1,"Ehlers-Danlos syndrome, vascular type"
R2 T2 T3 associated_with COL3A1,vEDS

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 65-83 HP_0000006 denotes autosomal dominant

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
21219851-1#130#136#gene1281 130-136 gene1281 denotes COL3A1
21219851-1#0#37#diseaseC0268338 0-37 diseaseC0268338 denotes Ehlers-Danlos syndrome, vascular type
21219851-1#39#43#diseaseC0268338 39-43 diseaseC0268338 denotes vEDS
130#136#gene12810#37#diseaseC0268338 21219851-1#130#136#gene1281 21219851-1#0#37#diseaseC0268338 associated_with COL3A1,"Ehlers-Danlos syndrome, vascular type"
130#136#gene128139#43#diseaseC0268338 21219851-1#130#136#gene1281 21219851-1#39#43#diseaseC0268338 associated_with COL3A1,vEDS