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Inflammaging

Id Subject Object Predicate Lexical cue
T1 0-125 Sentence denotes The dopamine β-hydroxylase -1021C/T polymorphism is associated with the risk of Alzheimer's disease in the Epistasis Project.
T2 126-137 Sentence denotes BACKGROUND:
T3 138-243 Sentence denotes The loss of noradrenergic neurones of the locus coeruleus is a major feature of Alzheimer's disease (AD).
T4 244-327 Sentence denotes Dopamine β-hydroxylase (DBH) catalyses the conversion of dopamine to noradrenaline.
T5 328-521 Sentence denotes Interactions have been reported between the low-activity -1021T allele (rs1611115) of DBH and polymorphisms of the pro-inflammatory cytokine genes, IL1A and IL6, contributing to the risk of AD.
T6 522-698 Sentence denotes We therefore examined the associations with AD of the DBH -1021T allele and of the above interactions in the Epistasis Project, with 1757 cases of AD and 6294 elderly controls.
T7 699-707 Sentence denotes METHODS:
T8 708-804 Sentence denotes We genotyped eight single nucleotide polymorphisms (SNPs) in the three genes, DBH, IL1A and IL6.
T9 805-927 Sentence denotes We used logistic regression models and synergy factor analysis to examine potential interactions and associations with AD.
T10 928-936 Sentence denotes RESULTS:
T11 937-1051 Sentence denotes We found that the presence of the -1021T allele was associated with AD: odds ratio = 1.2 (95% confidence interval:
T12 1052-1073 Sentence denotes 1.06-1.4, p = 0.005).
T13 1074-1171 Sentence denotes This association was nearly restricted to men < 75 years old: odds ratio = 2.2 (1.4-3.3, 0.0004).
T14 1172-1319 Sentence denotes We also found an interaction between the presence of DBH -1021T and the -889TT genotype (rs1800587) of IL1A: synergy factor = 1.9 (1.2-3.1, 0.005).
T15 1320-1391 Sentence denotes All these results were consistent between North Europe and North Spain.
T16 1392-1404 Sentence denotes CONCLUSIONS:
T17 1405-1540 Sentence denotes Extensive, previous evidence (reviewed here) indicates an important role for noradrenaline in the control of inflammation in the brain.
T18 1541-1688 Sentence denotes Thus, the -1021T allele with presumed low activity may be associated with misregulation of inflammation, which could contribute to the onset of AD.
T19 1689-1787 Sentence denotes We suggest that such misregulation is the predominant mechanism of the association we report here.
T1 0-125 Sentence denotes The dopamine β-hydroxylase -1021C/T polymorphism is associated with the risk of Alzheimer's disease in the Epistasis Project.
T2 126-137 Sentence denotes BACKGROUND:
T3 138-243 Sentence denotes The loss of noradrenergic neurones of the locus coeruleus is a major feature of Alzheimer's disease (AD).
T4 244-327 Sentence denotes Dopamine β-hydroxylase (DBH) catalyses the conversion of dopamine to noradrenaline.
T5 328-521 Sentence denotes Interactions have been reported between the low-activity -1021T allele (rs1611115) of DBH and polymorphisms of the pro-inflammatory cytokine genes, IL1A and IL6, contributing to the risk of AD.
T6 522-698 Sentence denotes We therefore examined the associations with AD of the DBH -1021T allele and of the above interactions in the Epistasis Project, with 1757 cases of AD and 6294 elderly controls.
T7 699-707 Sentence denotes METHODS:
T8 708-804 Sentence denotes We genotyped eight single nucleotide polymorphisms (SNPs) in the three genes, DBH, IL1A and IL6.
T9 805-927 Sentence denotes We used logistic regression models and synergy factor analysis to examine potential interactions and associations with AD.
T10 928-936 Sentence denotes RESULTS:
T11 937-1051 Sentence denotes We found that the presence of the -1021T allele was associated with AD: odds ratio = 1.2 (95% confidence interval:
T12 1052-1073 Sentence denotes 1.06-1.4, p = 0.005).
T13 1074-1171 Sentence denotes This association was nearly restricted to men < 75 years old: odds ratio = 2.2 (1.4-3.3, 0.0004).
T14 1172-1319 Sentence denotes We also found an interaction between the presence of DBH -1021T and the -889TT genotype (rs1800587) of IL1A: synergy factor = 1.9 (1.2-3.1, 0.005).
T15 1320-1391 Sentence denotes All these results were consistent between North Europe and North Spain.
T16 1392-1404 Sentence denotes CONCLUSIONS:
T17 1405-1540 Sentence denotes Extensive, previous evidence (reviewed here) indicates an important role for noradrenaline in the control of inflammation in the brain.
T18 1541-1688 Sentence denotes Thus, the -1021T allele with presumed low activity may be associated with misregulation of inflammation, which could contribute to the onset of AD.
T19 1689-1787 Sentence denotes We suggest that such misregulation is the predominant mechanism of the association we report here.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
8288 4-26 GeneOrGeneProduct denotes dopamine β-hydroxylase NCBIGene:1621
8289 27-35 SequenceVariant denotes -1021C/T DBSNP:rs1611115
8290 80-99 DiseaseOrPhenotypicFeature denotes Alzheimer's disease MESH:D000544
8291 218-237 DiseaseOrPhenotypicFeature denotes Alzheimer's disease MESH:D000544
8292 239-241 DiseaseOrPhenotypicFeature denotes AD MESH:D000544
8293 244-266 GeneOrGeneProduct denotes Dopamine β-hydroxylase NCBIGene:1621
8294 268-271 GeneOrGeneProduct denotes DBH NCBIGene:1621
8295 301-309 ChemicalEntity denotes dopamine MESH:D004298
8296 313-326 ChemicalEntity denotes noradrenaline MESH:D009638
8297 385-391 SequenceVariant denotes -1021T DBSNP:rs1611115
8298 400-409 SequenceVariant denotes rs1611115 DBSNP:rs1611115
8299 414-417 GeneOrGeneProduct denotes DBH NCBIGene:1621
8300 447-459 DiseaseOrPhenotypicFeature denotes inflammatory MESH:D007249
8301 476-480 GeneOrGeneProduct denotes IL1A NCBIGene:3552
8302 485-488 GeneOrGeneProduct denotes IL6 NCBIGene:3569
8303 518-520 DiseaseOrPhenotypicFeature denotes AD MESH:D000544
8304 566-568 DiseaseOrPhenotypicFeature denotes AD MESH:D000544
8305 576-579 GeneOrGeneProduct denotes DBH NCBIGene:1621
8306 580-586 SequenceVariant denotes -1021T DBSNP:rs1611115
8307 669-671 DiseaseOrPhenotypicFeature denotes AD MESH:D000544
8308 786-789 GeneOrGeneProduct denotes DBH NCBIGene:1621
8309 791-795 GeneOrGeneProduct denotes IL1A NCBIGene:3552
8310 800-803 GeneOrGeneProduct denotes IL6 NCBIGene:3569
8311 924-926 DiseaseOrPhenotypicFeature denotes AD MESH:D000544
8312 971-977 SequenceVariant denotes -1021T DBSNP:rs1611115
8313 1005-1007 DiseaseOrPhenotypicFeature denotes AD MESH:D000544
8314 1116-1119 OrganismTaxon denotes men NCBITaxon:9606
8315 1225-1228 GeneOrGeneProduct denotes DBH NCBIGene:1621
8316 1229-1235 SequenceVariant denotes -1021T DBSNP:rs1611115
8317 1244-1250 SequenceVariant denotes -889TT DBSNP:rs1800587
8318 1261-1270 SequenceVariant denotes rs1800587 DBSNP:rs1800587
8319 1275-1279 GeneOrGeneProduct denotes IL1A NCBIGene:3552
8320 1482-1495 ChemicalEntity denotes noradrenaline MESH:D009638
8321 1514-1526 DiseaseOrPhenotypicFeature denotes inflammation MESH:D007249
8322 1551-1557 SequenceVariant denotes -1021T DBSNP:rs1611115
8323 1632-1644 DiseaseOrPhenotypicFeature denotes inflammation MESH:D007249
8324 1685-1687 DiseaseOrPhenotypicFeature denotes AD MESH:D000544

LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-125 Sentence denotes The dopamine β-hydroxylase -1021C/T polymorphism is associated with the risk of Alzheimer's disease in the Epistasis Project.
T2 126-137 Sentence denotes BACKGROUND:
T3 138-243 Sentence denotes The loss of noradrenergic neurones of the locus coeruleus is a major feature of Alzheimer's disease (AD).
T4 244-327 Sentence denotes Dopamine β-hydroxylase (DBH) catalyses the conversion of dopamine to noradrenaline.
T5 328-521 Sentence denotes Interactions have been reported between the low-activity -1021T allele (rs1611115) of DBH and polymorphisms of the pro-inflammatory cytokine genes, IL1A and IL6, contributing to the risk of AD.
T6 522-698 Sentence denotes We therefore examined the associations with AD of the DBH -1021T allele and of the above interactions in the Epistasis Project, with 1757 cases of AD and 6294 elderly controls.
T7 699-707 Sentence denotes METHODS:
T8 708-804 Sentence denotes We genotyped eight single nucleotide polymorphisms (SNPs) in the three genes, DBH, IL1A and IL6.
T9 805-927 Sentence denotes We used logistic regression models and synergy factor analysis to examine potential interactions and associations with AD.
T10 928-936 Sentence denotes RESULTS:
T11 937-1051 Sentence denotes We found that the presence of the -1021T allele was associated with AD: odds ratio = 1.2 (95% confidence interval:
T12 1052-1073 Sentence denotes 1.06-1.4, p = 0.005).
T13 1074-1171 Sentence denotes This association was nearly restricted to men < 75 years old: odds ratio = 2.2 (1.4-3.3, 0.0004).
T14 1172-1319 Sentence denotes We also found an interaction between the presence of DBH -1021T and the -889TT genotype (rs1800587) of IL1A: synergy factor = 1.9 (1.2-3.1, 0.005).
T15 1320-1391 Sentence denotes All these results were consistent between North Europe and North Spain.
T16 1392-1404 Sentence denotes CONCLUSIONS:
T17 1405-1540 Sentence denotes Extensive, previous evidence (reviewed here) indicates an important role for noradrenaline in the control of inflammation in the brain.
T18 1541-1688 Sentence denotes Thus, the -1021T allele with presumed low activity may be associated with misregulation of inflammation, which could contribute to the onset of AD.
T19 1689-1787 Sentence denotes We suggest that such misregulation is the predominant mechanism of the association we report here.

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 80-99 DiseaseOrPhenotypicFeature denotes Alzheimer's disease 0004975
T2 164-172 DiseaseOrPhenotypicFeature denotes neurones 0004466
T3 218-237 DiseaseOrPhenotypicFeature denotes Alzheimer's disease 0004975

LitCoin-SeqVar

Id Subject Object Predicate Lexical cue
T1 28-33 SequenceVariant denotes 1021C
T2 386-391 SequenceVariant denotes 1021T
T3 400-409 SequenceVariant denotes rs1611115
T4 581-586 SequenceVariant denotes 1021T
T5 972-977 SequenceVariant denotes 1021T
T6 1230-1235 SequenceVariant denotes 1021T
T7 1245-1250 SequenceVariant denotes 889TT
T8 1261-1270 SequenceVariant denotes rs1800587
T9 1552-1557 SequenceVariant denotes 1021T

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 15-26 GeneOrGeneProduct denotes hydroxylase
T2 201-206 GeneOrGeneProduct denotes major
T3 255-266 GeneOrGeneProduct denotes hydroxylase
T4 376-384 GeneOrGeneProduct denotes activity
T5 443-446 GeneOrGeneProduct denotes pro
T6 476-480 GeneOrGeneProduct denotes IL1A
T7 485-488 GeneOrGeneProduct denotes IL6
T8 660-665 GeneOrGeneProduct denotes cases
T9 699-706 GeneOrGeneProduct denotes METHODS
T10 791-795 GeneOrGeneProduct denotes IL1A
T11 800-803 GeneOrGeneProduct denotes IL6
T12 852-858 GeneOrGeneProduct denotes factor
T13 1125-1130 GeneOrGeneProduct denotes years
T14 1149-1152 GeneOrGeneProduct denotes 2.2
T15 1275-1279 GeneOrGeneProduct denotes IL1A
T16 1289-1295 GeneOrGeneProduct denotes factor
T17 1320-1323 GeneOrGeneProduct denotes All
T18 1405-1414 GeneOrGeneProduct denotes Extensive
T19 1534-1539 GeneOrGeneProduct denotes brain
T20 1583-1591 GeneOrGeneProduct denotes activity

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 15-26 GeneOrGeneProduct denotes hydroxylase
T2 201-206 GeneOrGeneProduct denotes major
T3 255-266 GeneOrGeneProduct denotes hydroxylase
T4 476-480 GeneOrGeneProduct denotes IL1A
T5 485-488 GeneOrGeneProduct denotes IL6
T6 791-795 GeneOrGeneProduct denotes IL1A
T7 800-803 GeneOrGeneProduct denotes IL6
T8 852-858 GeneOrGeneProduct denotes factor
T9 1275-1279 GeneOrGeneProduct denotes IL1A
T10 1289-1295 GeneOrGeneProduct denotes factor
T11 1534-1539 GeneOrGeneProduct denotes brain

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 80-99 DiseaseOrPhenotypicFeature denotes Alzheimer's disease D000544
T2 218-237 DiseaseOrPhenotypicFeature denotes Alzheimer's disease D000544
T3 239-241 DiseaseOrPhenotypicFeature denotes AD D000544
T4 447-459 DiseaseOrPhenotypicFeature denotes inflammatory DISEASE
T5 518-520 DiseaseOrPhenotypicFeature denotes AD D000544
T6 566-568 DiseaseOrPhenotypicFeature denotes AD D000544
T7 669-671 DiseaseOrPhenotypicFeature denotes AD D000544
T8 924-926 DiseaseOrPhenotypicFeature denotes AD D000544
T9 1005-1007 DiseaseOrPhenotypicFeature denotes AD D000544
T10 1514-1526 DiseaseOrPhenotypicFeature denotes inflammation D007249
T11 1632-1644 DiseaseOrPhenotypicFeature denotes inflammation D007249
T12 1685-1687 DiseaseOrPhenotypicFeature denotes AD D000544

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 15-26 GeneOrGeneProduct denotes hydroxylase
T2 255-266 GeneOrGeneProduct denotes hydroxylase
T3 476-480 GeneOrGeneProduct denotes IL1A
T4 485-488 GeneOrGeneProduct denotes IL6
T5 791-795 GeneOrGeneProduct denotes IL1A
T6 800-803 GeneOrGeneProduct denotes IL6
T7 1275-1279 GeneOrGeneProduct denotes IL1A

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 80-99 DiseaseOrPhenotypicFeature denotes Alzheimer's disease 0004975
T2 218-237 DiseaseOrPhenotypicFeature denotes Alzheimer's disease 0004975
T3 239-241 DiseaseOrPhenotypicFeature denotes AD 0011913|0007088|0004975
T6 518-520 DiseaseOrPhenotypicFeature denotes AD 0011913|0007088|0004975
T9 566-568 DiseaseOrPhenotypicFeature denotes AD 0011913|0007088|0004975
T12 669-671 DiseaseOrPhenotypicFeature denotes AD 0011913|0007088|0004975
T15 924-926 DiseaseOrPhenotypicFeature denotes AD 0011913|0007088|0004975
T18 1005-1007 DiseaseOrPhenotypicFeature denotes AD 0011913|0007088|0004975
T21 1116-1119 DiseaseOrPhenotypicFeature denotes men 0017169
T22 1685-1687 DiseaseOrPhenotypicFeature denotes AD 0011913|0007088|0004975

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 80-99 DiseaseOrPhenotypicFeature denotes Alzheimer's disease D000544
T2 218-237 DiseaseOrPhenotypicFeature denotes Alzheimer's disease D000544
T3 239-241 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544
T5 447-459 DiseaseOrPhenotypicFeature denotes inflammatory DISEASE
T6 518-520 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544
T8 566-568 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544
T10 669-671 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544
T12 924-926 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544
T14 1005-1007 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544
T16 1514-1539 DiseaseOrPhenotypicFeature denotes inflammation in the brain D004660
T17 1632-1644 DiseaseOrPhenotypicFeature denotes inflammation DISEASE|D007249
T19 1685-1687 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 80-99 DiseaseOrPhenotypicFeature denotes Alzheimer's disease D000544
T2 218-237 DiseaseOrPhenotypicFeature denotes Alzheimer's disease D000544
T3 239-241 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544
T5 443-459 DiseaseOrPhenotypicFeature denotes pro-inflammatory DISEASE
T6 518-520 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544
T8 566-568 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544
T10 669-671 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544
T12 924-926 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544
T14 1005-1007 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544
T16 1514-1526 DiseaseOrPhenotypicFeature denotes inflammation D007249
T17 1632-1644 DiseaseOrPhenotypicFeature denotes inflammation D007249
T18 1685-1687 DiseaseOrPhenotypicFeature denotes AD DISEASE|D000544

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 4-12 ChemicalEntity denotes dopamine D004298|http://purl.obolibrary.org/obo/CHEBI_59905|http://purl.obolibrary.org/obo/CHEBI_18243
T4 15-26 ChemicalEntity denotes hydroxylase D006899
T5 244-252 ChemicalEntity denotes Dopamine http://purl.obolibrary.org/obo/CHEBI_18243
T6 255-266 ChemicalEntity denotes hydroxylase D006899
T7 301-309 ChemicalEntity denotes dopamine D004298|http://purl.obolibrary.org/obo/CHEBI_59905|http://purl.obolibrary.org/obo/CHEBI_18243
T10 313-326 ChemicalEntity denotes noradrenaline D009638|http://purl.obolibrary.org/obo/CHEBI_33569|http://purl.obolibrary.org/obo/CHEBI_166902
T13 1482-1495 ChemicalEntity denotes noradrenaline D009638|http://purl.obolibrary.org/obo/CHEBI_33569|http://purl.obolibrary.org/obo/CHEBI_166902

LitCoin-NCBITaxon-2

Id Subject Object Predicate Lexical cue
T1 1116-1119 OrganismTaxon denotes men

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T13 1482-1495 ChemicalEntity denotes noradrenaline http://purl.obolibrary.org/obo/CHEBI_166902|http://purl.obolibrary.org/obo/CHEBI_33569|D009638
T10 313-326 ChemicalEntity denotes noradrenaline http://purl.obolibrary.org/obo/CHEBI_166902|http://purl.obolibrary.org/obo/CHEBI_33569|D009638
T7 301-309 ChemicalEntity denotes dopamine http://purl.obolibrary.org/obo/CHEBI_18243|http://purl.obolibrary.org/obo/CHEBI_59905|D004298
T6 255-266 ChemicalEntity denotes hydroxylase D006899
T5 244-252 ChemicalEntity denotes Dopamine http://purl.obolibrary.org/obo/CHEBI_18243
T4 15-26 ChemicalEntity denotes hydroxylase D006899
T1 4-12 ChemicalEntity denotes dopamine http://purl.obolibrary.org/obo/CHEBI_18243|http://purl.obolibrary.org/obo/CHEBI_59905|D004298
T22877 1275-1279 GeneOrGeneProduct denotes IL1A
T27127 800-803 GeneOrGeneProduct denotes IL6
T34025 791-795 GeneOrGeneProduct denotes IL1A
T77247 485-488 GeneOrGeneProduct denotes IL6
T3 476-480 GeneOrGeneProduct denotes IL1A
T2 255-266 GeneOrGeneProduct denotes hydroxylase
T21395 15-26 GeneOrGeneProduct denotes hydroxylase
T18 1685-1687 DiseaseOrPhenotypicFeature denotes AD D000544|DISEASE
T17 1632-1644 DiseaseOrPhenotypicFeature denotes inflammation D007249
T16 1514-1526 DiseaseOrPhenotypicFeature denotes inflammation D007249
T14 1005-1007 DiseaseOrPhenotypicFeature denotes AD D000544|DISEASE
T12 924-926 DiseaseOrPhenotypicFeature denotes AD D000544|DISEASE
T60878 669-671 DiseaseOrPhenotypicFeature denotes AD D000544|DISEASE
T8 566-568 DiseaseOrPhenotypicFeature denotes AD D000544|DISEASE
T54682 518-520 DiseaseOrPhenotypicFeature denotes AD D000544|DISEASE
T72437 443-459 DiseaseOrPhenotypicFeature denotes pro-inflammatory DISEASE
T97616 239-241 DiseaseOrPhenotypicFeature denotes AD D000544|DISEASE
T77620 218-237 DiseaseOrPhenotypicFeature denotes Alzheimer's disease D000544
T11413 80-99 DiseaseOrPhenotypicFeature denotes Alzheimer's disease D000544
T37082 1116-1119 OrganismTaxon denotes men
T9 1552-1557 SequenceVariant denotes 1021T
T66338 1261-1270 SequenceVariant denotes rs1800587
T90062 1245-1250 SequenceVariant denotes 889TT
T87524 1230-1235 SequenceVariant denotes 1021T
T57872 972-977 SequenceVariant denotes 1021T
T7004 581-586 SequenceVariant denotes 1021T
T39658 400-409 SequenceVariant denotes rs1611115
T11035 386-391 SequenceVariant denotes 1021T
T74969 28-33 SequenceVariant denotes 1021C

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 218-237 HP_0002511 denotes Alzheimer's disease

Allie

Id Subject Object Predicate Lexical cue
SS1_21070631_2_0 218-237 expanded denotes Alzheimer's disease
SS2_21070631_2_0 239-241 abbr denotes AD
SS1_21070631_3_0 244-266 expanded denotes Dopamine β-hydroxylase
SS2_21070631_3_0 268-271 abbr denotes DBH
SS1_21070631_7_0 727-758 expanded denotes single nucleotide polymorphisms
SS2_21070631_7_0 760-764 abbr denotes SNPs
AE1_21070631_2_0 SS1_21070631_2_0 SS2_21070631_2_0 abbreviatedTo Alzheimer's disease,AD
AE1_21070631_3_0 SS1_21070631_3_0 SS2_21070631_3_0 abbreviatedTo Dopamine β-hydroxylase,DBH
AE1_21070631_7_0 SS1_21070631_7_0 SS2_21070631_7_0 abbreviatedTo single nucleotide polymorphisms,SNPs

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
21070631-3#157#160#gene3569 485-488 gene3569 denotes IL6
21070631-3#190#192#diseaseC0002395 518-520 diseaseC0002395 denotes AD
157#160#gene3569190#192#diseaseC0002395 21070631-3#157#160#gene3569 21070631-3#190#192#diseaseC0002395 associated_with IL6,AD

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 27-35 DNAMutation:c|SUB|C|-1021|T denotes -1021C/T
T2 400-409 SNP:rs1611115 denotes rs1611115
T3 1261-1270 SNP:rs1800587 denotes rs1800587