PubMed:20871101
Annnotations
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-89 | Sentence | denotes | Analogies and homologies in lipopolysaccharide and glycoprotein biosynthesis in bacteria. |
| TextSentencer_T2 | 90-173 | Sentence | denotes | Bacteria generate and attach countless glycan structures to diverse macromolecules. |
| TextSentencer_T3 | 174-275 | Sentence | denotes | Despite this diversity, the mechanisms of glycoconjugate biosynthesis are often surprisingly similar. |
| TextSentencer_T4 | 276-429 | Sentence | denotes | The focus of this review is on the commonalities between lipopolysaccharide (LPS) and glycoprotein assembly pathways and their evolutionary relationship. |
| TextSentencer_T5 | 430-514 | Sentence | denotes | Three steps that are essential for both pathways are completed by membrane proteins. |
| TextSentencer_T6 | 515-760 | Sentence | denotes | These include the initiation of glycan assembly through the attachment of a first sugar residue onto the lipid carrier undecaprenyl pyrophosphate, the translocation across the plasma membrane and the final transfer onto proteins or lipid A-core. |
| TextSentencer_T7 | 761-1000 | Sentence | denotes | Two families of initiating enzymes have been described: the polyprenyl-P N-acetylhexosamine-1-P transferases and the polyprenyl-P hexosamine-1-P transferases, represented by Escherichia coli WecA and Salmonella enterica WbaP, respectively. |
| TextSentencer_T8 | 1001-1125 | Sentence | denotes | Translocases are either Wzx-like flippases or adenosine triphosphate (ATP)-binding cassette transporters (ABC transporters). |
| TextSentencer_T9 | 1126-1258 | Sentence | denotes | The latter can consist either of two polypeptides, Wzt and Wzm, or of a single polypeptide homolog to the Campylobacter jejuni PglK. |
| TextSentencer_T10 | 1259-1506 | Sentence | denotes | Finally, there are two families of conjugating enzymes, the N-oligosaccharyltransferases (N-OTase), best represented by C. jejuni PglB, and the O-OTases, including Neisseria meningitidis PglL and the O antigen ligases involved in LPS biosynthesis. |
| TextSentencer_T11 | 1507-1705 | Sentence | denotes | With the exception of the N-OTases, probably restricted to glycoprotein synthesis, members of all these transmembrane protein families can be involved in the synthesis of both glycoproteins and LPS. |
| TextSentencer_T12 | 1706-1958 | Sentence | denotes | Because many translocation and conjugation enzymes display relaxed substrate specificity, these bacterial enzymes could be exploited in engineered living bacteria for customized glycoconjugate production, generating potential vaccines and therapeutics. |
| T1 | 0-89 | Sentence | denotes | Analogies and homologies in lipopolysaccharide and glycoprotein biosynthesis in bacteria. |
| T2 | 90-173 | Sentence | denotes | Bacteria generate and attach countless glycan structures to diverse macromolecules. |
| T3 | 174-275 | Sentence | denotes | Despite this diversity, the mechanisms of glycoconjugate biosynthesis are often surprisingly similar. |
| T4 | 276-429 | Sentence | denotes | The focus of this review is on the commonalities between lipopolysaccharide (LPS) and glycoprotein assembly pathways and their evolutionary relationship. |
| T5 | 430-514 | Sentence | denotes | Three steps that are essential for both pathways are completed by membrane proteins. |
| T6 | 515-760 | Sentence | denotes | These include the initiation of glycan assembly through the attachment of a first sugar residue onto the lipid carrier undecaprenyl pyrophosphate, the translocation across the plasma membrane and the final transfer onto proteins or lipid A-core. |
| T7 | 761-1000 | Sentence | denotes | Two families of initiating enzymes have been described: the polyprenyl-P N-acetylhexosamine-1-P transferases and the polyprenyl-P hexosamine-1-P transferases, represented by Escherichia coli WecA and Salmonella enterica WbaP, respectively. |
| T8 | 1001-1125 | Sentence | denotes | Translocases are either Wzx-like flippases or adenosine triphosphate (ATP)-binding cassette transporters (ABC transporters). |
| T9 | 1126-1258 | Sentence | denotes | The latter can consist either of two polypeptides, Wzt and Wzm, or of a single polypeptide homolog to the Campylobacter jejuni PglK. |
| T10 | 1259-1506 | Sentence | denotes | Finally, there are two families of conjugating enzymes, the N-oligosaccharyltransferases (N-OTase), best represented by C. jejuni PglB, and the O-OTases, including Neisseria meningitidis PglL and the O antigen ligases involved in LPS biosynthesis. |
| T11 | 1507-1705 | Sentence | denotes | With the exception of the N-OTases, probably restricted to glycoprotein synthesis, members of all these transmembrane protein families can be involved in the synthesis of both glycoproteins and LPS. |
| T12 | 1706-1958 | Sentence | denotes | Because many translocation and conjugation enzymes display relaxed substrate specificity, these bacterial enzymes could be exploited in engineered living bacteria for customized glycoconjugate production, generating potential vaccines and therapeutics. |
| T1 | 0-89 | Sentence | denotes | Analogies and homologies in lipopolysaccharide and glycoprotein biosynthesis in bacteria. |
| T2 | 90-173 | Sentence | denotes | Bacteria generate and attach countless glycan structures to diverse macromolecules. |
| T3 | 174-275 | Sentence | denotes | Despite this diversity, the mechanisms of glycoconjugate biosynthesis are often surprisingly similar. |
| T4 | 276-429 | Sentence | denotes | The focus of this review is on the commonalities between lipopolysaccharide (LPS) and glycoprotein assembly pathways and their evolutionary relationship. |
| T5 | 430-514 | Sentence | denotes | Three steps that are essential for both pathways are completed by membrane proteins. |
| T6 | 515-760 | Sentence | denotes | These include the initiation of glycan assembly through the attachment of a first sugar residue onto the lipid carrier undecaprenyl pyrophosphate, the translocation across the plasma membrane and the final transfer onto proteins or lipid A-core. |
| T7 | 761-1000 | Sentence | denotes | Two families of initiating enzymes have been described: the polyprenyl-P N-acetylhexosamine-1-P transferases and the polyprenyl-P hexosamine-1-P transferases, represented by Escherichia coli WecA and Salmonella enterica WbaP, respectively. |
| T8 | 1001-1125 | Sentence | denotes | Translocases are either Wzx-like flippases or adenosine triphosphate (ATP)-binding cassette transporters (ABC transporters). |
| T9 | 1126-1258 | Sentence | denotes | The latter can consist either of two polypeptides, Wzt and Wzm, or of a single polypeptide homolog to the Campylobacter jejuni PglK. |
| T10 | 1259-1506 | Sentence | denotes | Finally, there are two families of conjugating enzymes, the N-oligosaccharyltransferases (N-OTase), best represented by C. jejuni PglB, and the O-OTases, including Neisseria meningitidis PglL and the O antigen ligases involved in LPS biosynthesis. |
| T11 | 1507-1705 | Sentence | denotes | With the exception of the N-OTases, probably restricted to glycoprotein synthesis, members of all these transmembrane protein families can be involved in the synthesis of both glycoproteins and LPS. |
| T12 | 1706-1958 | Sentence | denotes | Because many translocation and conjugation enzymes display relaxed substrate specificity, these bacterial enzymes could be exploited in engineered living bacteria for customized glycoconjugate production, generating potential vaccines and therapeutics. |
GlycoBiology-PACDB
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T1 | 935-951 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC487 | denotes | Escherichia coli |
| _T2 | 935-951 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC002,LEC056,LEC062,LEC069,LEC081,LEC111,LEC133,LEC171,LEC177,LEC187,LEC211,LEC242,LEC252,LEC258,LEC259,LEC260,LEC262,LEC369,LEC377,LEC422,LEC442,LEC448,LEC450,LEC451,LEC454,LEC472,LEC492,LEC620 | denotes | Escherichia coli |
| _T3 | 935-951 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC157,LEC407 | denotes | Escherichia coli |
| _T4 | 935-951 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC754 | denotes | Escherichia coli |
| _T5 | 935-951 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC243,LEC640 | denotes | Escherichia coli |
| _T6 | 935-951 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC295,LEC417 | denotes | Escherichia coli |
| _T7 | 935-951 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC636 | denotes | Escherichia coli |
| _T8 | 935-951 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC244,LEC256,LEC354 | denotes | Escherichia coli |
| _T9 | 935-951 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC054,LEC058,LEC073,LEC082,LEC091,LEC103,LEC109,LEC110,LEC123,LEC158,LEC179,LEC198,LEC205,LEC222,LEC223,LEC224,LEC225,LEC232,LEC298,LEC357,LEC378,LEC383,LEC388,LEC389,LEC397,LEC401,LEC410,LEC452 | denotes | Escherichia coli |
| _T10 | 961-980 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC743 | denotes | Salmonella enterica |
| _T11 | 1232-1252 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC257,LEC564 | denotes | Campylobacter jejuni |
| _T12 | 1423-1445 | http://acgg.asia/db/diseases/pacdb/lec?ids=LEC453,LEC742 | denotes | Neisseria meningitidis |
GlycoBiology-FMA
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T1 | 28-46 | FMAID:196735 | denotes | lipopolysaccharide |
| _T2 | 28-46 | FMAID:196779 | denotes | lipopolysaccharide |
| _T3 | 28-46 | FMAID:82785 | denotes | lipopolysaccharide |
| _T4 | 28-46 | FMAID:82746 | denotes | lipopolysaccharide |
| _T5 | 51-63 | FMAID:62925 | denotes | glycoprotein |
| _T6 | 51-63 | FMAID:167256 | denotes | glycoprotein |
| _T7 | 216-230 | FMAID:82782 | denotes | glycoconjugate |
| _T8 | 216-230 | FMAID:196776 | denotes | glycoconjugate |
| _T9 | 333-351 | FMAID:82746 | denotes | lipopolysaccharide |
| _T10 | 333-351 | FMAID:196735 | denotes | lipopolysaccharide |
| _T11 | 333-351 | FMAID:196779 | denotes | lipopolysaccharide |
| _T12 | 333-351 | FMAID:82785 | denotes | lipopolysaccharide |
| _T13 | 362-374 | FMAID:167256 | denotes | glycoprotein |
| _T14 | 362-374 | FMAID:62925 | denotes | glycoprotein |
| _T15 | 496-513 | FMAID:198528 | denotes | membrane proteins |
| _T16 | 496-513 | FMAID:89997 | denotes | membrane proteins |
| _T17 | 505-513 | FMAID:67257 | denotes | proteins |
| _T18 | 505-513 | FMAID:165447 | denotes | proteins |
| _T19 | 597-602 | FMAID:196724 | denotes | sugar |
| _T20 | 620-625 | FMAID:67264 | denotes | lipid |
| _T21 | 620-625 | FMAID:165448 | denotes | lipid |
| _T22 | 691-697 | FMAID:162307 | denotes | plasma |
| _T23 | 691-706 | FMAID:164993 | denotes | plasma membrane |
| _T24 | 691-706 | FMAID:210691 | denotes | plasma membrane |
| _T25 | 691-706 | FMAID:66843 | denotes | plasma membrane |
| _T26 | 691-706 | FMAID:63841 | denotes | plasma membrane |
| _T27 | 691-706 | FMAID:166047 | denotes | plasma membrane |
| _T28 | 691-706 | FMAID:162306 | denotes | plasma membrane |
| _T29 | 735-743 | FMAID:165447 | denotes | proteins |
| _T30 | 735-743 | FMAID:67257 | denotes | proteins |
| _T31 | 747-752 | FMAID:165448 | denotes | lipid |
| _T32 | 747-752 | FMAID:67264 | denotes | lipid |
| _T33 | 1093-1123 | FMAID:199023 | denotes | transporters (ABC transporters |
| _T34 | 1093-1123 | FMAID:84759 | denotes | transporters (ABC transporters |
| _T35 | 1130-1136 | FMAID:171168 | denotes | latter |
| _T36 | 1130-1136 | FMAID:30332 | denotes | latter |
| _T37 | 1566-1578 | FMAID:167256 | denotes | glycoprotein |
| _T38 | 1566-1578 | FMAID:62925 | denotes | glycoprotein |
| _T39 | 1611-1632 | FMAID:67858 | denotes | transmembrane protein |
| _T40 | 1611-1632 | FMAID:89997 | denotes | transmembrane protein |
| _T41 | 1611-1632 | FMAID:198531 | denotes | transmembrane protein |
| _T42 | 1611-1632 | FMAID:198530 | denotes | transmembrane protein |
| _T43 | 1625-1632 | FMAID:67257 | denotes | protein |
| _T44 | 1625-1632 | FMAID:165447 | denotes | protein |
| _T45 | 1683-1696 | FMAID:167256 | denotes | glycoproteins |
| _T46 | 1683-1696 | FMAID:62925 | denotes | glycoproteins |
| _T47 | 1884-1898 | FMAID:196776 | denotes | glycoconjugate |
| _T48 | 1884-1898 | FMAID:82782 | denotes | glycoconjugate |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 853-869 | http://www.uniprot.org/uniprot/Q9H3H5 | denotes | 1-P transferases |
| T2 | 902-918 | http://www.uniprot.org/uniprot/Q9H3H5 | denotes | 1-P transferases |
| T3 | 857-869 | http://www.uniprot.org/uniprot/Q99484 | denotes | transferases |
| T4 | 906-918 | http://www.uniprot.org/uniprot/Q99484 | denotes | transferases |
| T5 | 1071-1092 | http://www.uniprot.org/uniprot/Q8NE71 | denotes | ATP)-binding cassette |
| T6 | 1071-1105 | http://www.uniprot.org/uniprot/Q99758 | denotes | ATP)-binding cassette transporters |
| T7 | 1071-1105 | http://www.uniprot.org/uniprot/Q9BZC7 | denotes | ATP)-binding cassette transporters |
| T8 | 1071-1105 | http://www.uniprot.org/uniprot/Q9UN09 | denotes | ATP)-binding cassette transporters |
| T9 | 1071-1105 | http://www.uniprot.org/uniprot/Q86UK0 | denotes | ATP)-binding cassette transporters |
| T10 | 1071-1105 | http://www.uniprot.org/uniprot/Q9NP78 | denotes | ATP)-binding cassette transporters |
| T11 | 1071-1105 | http://www.uniprot.org/uniprot/O75027 | denotes | ATP)-binding cassette transporters |
| T12 | 1071-1105 | http://www.uniprot.org/uniprot/Q9NRK6 | denotes | ATP)-binding cassette transporters |
| T13 | 1071-1105 | http://www.uniprot.org/uniprot/Q9BXL1 | denotes | ATP)-binding cassette transporters |
| T14 | 1351-1356 | http://www.uniprot.org/uniprot/Q9UIQ6 | denotes | OTase |
uniprot-mouse
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 857-869 | http://www.uniprot.org/uniprot/P38649 | denotes | transferases |
| T2 | 906-918 | http://www.uniprot.org/uniprot/P38649 | denotes | transferases |
| T3 | 1351-1356 | http://www.uniprot.org/uniprot/Q8C129 | denotes | OTase |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 77-98 | http://purl.bioontology.org/ontology/NCBITAXON/1134404 | denotes | in bacteria. Bacteria |
| T2 | 77-98 | http://purl.bioontology.org/ontology/NCBITAXON/795747 | denotes | in bacteria. Bacteria |
| T3 | 80-88 | http://purl.bioontology.org/ontology/NCBITAXON/629395 | denotes | bacteria |
| T4 | 80-88 | http://purl.bioontology.org/ontology/NCBITAXON/2 | denotes | bacteria |
| T5 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/307596 | denotes | bacteria. Bacteria |
| T6 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/134549 | denotes | bacteria. Bacteria |
| T7 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/1224 | denotes | bacteria. Bacteria |
| T8 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/426670 | denotes | bacteria. Bacteria |
| T9 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/290154 | denotes | bacteria. Bacteria |
| T10 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/368480 | denotes | bacteria. Bacteria |
| T11 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/1030078 | denotes | bacteria. Bacteria |
| T12 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/159444 | denotes | bacteria. Bacteria |
| T13 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/28216 | denotes | bacteria. Bacteria |
| T14 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/67818 | denotes | bacteria. Bacteria |
| T15 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/1117 | denotes | bacteria. Bacteria |
| T16 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/221216 | denotes | bacteria. Bacteria |
| T17 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/32066 | denotes | bacteria. Bacteria |
| T18 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/388447 | denotes | bacteria. Bacteria |
| T19 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/183963 | denotes | bacteria. Bacteria |
| T20 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/74015 | denotes | bacteria. Bacteria |
| T21 | 80-98 | http://purl.bioontology.org/ontology/NCBITAXON/265317 | denotes | bacteria. Bacteria |
| T22 | 90-98 | http://purl.bioontology.org/ontology/NCBITAXON/2 | denotes | Bacteria |
| T23 | 90-98 | http://purl.bioontology.org/ontology/NCBITAXON/629395 | denotes | Bacteria |
| T24 | 202-212 | http://purl.bioontology.org/ontology/NCBITAXON/127244 | denotes | mechanisms |
| T25 | 935-946 | http://purl.bioontology.org/ontology/NCBITAXON/561 | denotes | Escherichia |
| T26 | 961-971 | http://purl.bioontology.org/ontology/NCBITAXON/590 | denotes | Salmonella |
| T27 | 1232-1252 | http://purl.bioontology.org/ontology/NCBITAXON/197 | denotes | Campylobacter jejuni |
| T28 | 1423-1432 | http://purl.bioontology.org/ontology/NCBITAXON/481 | denotes | Neisseria |
| T29 | 1423-1432 | http://purl.bioontology.org/ontology/NCBITAXON/206351 | denotes | Neisseria |
| T30 | 1423-1432 | http://purl.bioontology.org/ontology/NCBITAXON/482 | denotes | Neisseria |
| T31 | 1423-1445 | http://purl.bioontology.org/ontology/NCBITAXON/487 | denotes | Neisseria meningitidis |
| T32 | 1714-1718 | http://purl.bioontology.org/ontology/NCBITAXON/9973 | denotes | many |
| T33 | 1860-1868 | http://purl.bioontology.org/ontology/NCBITAXON/629395 | denotes | bacteria |
| T34 | 1860-1868 | http://purl.bioontology.org/ontology/NCBITAXON/2 | denotes | bacteria |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 51-76 | http://purl.obolibrary.org/obo/GO_0009101 | denotes | glycoprotein biosynthesis |
| T2 | 64-76 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | biosynthesis |
| T3 | 231-243 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | biosynthesis |
| T4 | 1493-1505 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | biosynthesis |
| T5 | 735-752 | http://purl.obolibrary.org/obo/GO_0006497 | denotes | proteins or lipid |
| T6 | 1034-1043 | http://purl.obolibrary.org/obo/GO_0034203 | denotes | flippases |
| T7 | 1034-1043 | http://purl.obolibrary.org/obo/GO_0045332 | denotes | flippases |
| T8 | 1071-1105 | http://purl.obolibrary.org/obo/GO_0042626 | denotes | ATP)-binding cassette transporters |
| T9 | 1071-1110 | http://purl.obolibrary.org/obo/GO_0042626 | denotes | ATP)-binding cassette transporters (ABC |
| T10 | 1093-1105 | http://purl.obolibrary.org/obo/GO_0006810 | denotes | transporters |
| T11 | 1111-1123 | http://purl.obolibrary.org/obo/GO_0006810 | denotes | transporters |
| T12 | 1107-1123 | http://purl.obolibrary.org/obo/GO_0042626 | denotes | ABC transporters |
| T13 | 1294-1305 | http://purl.obolibrary.org/obo/GO_0000746 | denotes | conjugating |
| T14 | 1737-1748 | http://purl.obolibrary.org/obo/GO_0000746 | denotes | conjugation |
| T15 | 1459-1476 | http://purl.obolibrary.org/obo/GO_0008754 | denotes | O antigen ligases |
| T16 | 1566-1588 | http://purl.obolibrary.org/obo/GO_0009101 | denotes | glycoprotein synthesis |
| T17 | 1579-1588 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | synthesis |
| T18 | 1665-1674 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | synthesis |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1071-1083 | http://purl.obolibrary.org/obo/GO_0005524 | denotes | ATP)-binding |
| T2 | 1076-1083 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
| T3 | 1076-1083 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
| T4 | 1076-1083 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
| T5 | 1076-1083 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 496-504 | http://purl.obolibrary.org/obo/GO_0016020 | denotes | membrane |
| T2 | 698-706 | http://purl.obolibrary.org/obo/GO_0016020 | denotes | membrane |
| T3 | 691-706 | http://purl.obolibrary.org/obo/GO_0005886 | denotes | plasma membrane |
| T4 | 755-759 | http://purl.obolibrary.org/obo/GO_0019013 | denotes | core |
| T5 | 1611-1624 | http://purl.obolibrary.org/obo/GO_0016021 | denotes | transmembrane |
| T6 | 1611-1624 | http://purl.obolibrary.org/obo/GO_0044214 | denotes | transmembrane |
Allie
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| SS1_20871101_3_0 | 333-351 | expanded | denotes | lipopolysaccharide |
| SS2_20871101_3_0 | 353-356 | abbr | denotes | LPS |
| SS1_20871101_7_0 | 1047-1069 | expanded | denotes | adenosine triphosphate |
| SS2_20871101_7_0 | 1071-1074 | abbr | denotes | ATP |
| SS1_20871101_9_0 | 1319-1347 | expanded | denotes | N-oligosaccharyltransferases |
| SS2_20871101_9_0 | 1349-1356 | abbr | denotes | N-OTase |
| AE1_20871101_3_0 | SS1_20871101_3_0 | SS2_20871101_3_0 | abbreviatedTo | lipopolysaccharide,LPS |
| AE1_20871101_7_0 | SS1_20871101_7_0 | SS2_20871101_7_0 | abbreviatedTo | adenosine triphosphate,ATP |
| AE1_20871101_9_0 | SS1_20871101_9_0 | SS2_20871101_9_0 | abbreviatedTo | N-oligosaccharyltransferases,N-OTase |
GlycoBiology-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1130-1136 | http://purl.obolibrary.org/obo/MAT_0000488 | denotes | latter |
GlycoBiology-Motifs
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 353-356 | http://rdf.glycoinfo.org/glycan/G00022MO | denotes | LPS |
| T2 | 1489-1492 | http://rdf.glycoinfo.org/glycan/G00022MO | denotes | LPS |
| T3 | 1701-1704 | http://rdf.glycoinfo.org/glycan/G00022MO | denotes | LPS |
GlyTouCan-IUPAC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| GlycanIUPAC_T1 | 597-602 | "http://rdf.glycoinfo.org/glycan/G59665TO" | denotes | sugar |
| GlycanIUPAC_T2 | 597-602 | "http://rdf.glycoinfo.org/glycan/G32915EI" | denotes | sugar |
| GlycanIUPAC_T3 | 597-602 | "http://rdf.glycoinfo.org/glycan/G60625TS" | denotes | sugar |
| GlycanIUPAC_T4 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G41652MJ" | denotes | all |
| GlycanIUPAC_T5 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G20761YC" | denotes | all |
| GlycanIUPAC_T6 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G19807HM" | denotes | all |
| GlycanIUPAC_T7 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G20351TE" | denotes | all |
| GlycanIUPAC_T8 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G71957MR" | denotes | all |
| GlycanIUPAC_T9 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G59040AE" | denotes | all |
| GlycanIUPAC_T10 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G14987PW" | denotes | all |
| GlycanIUPAC_T11 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G95064PC" | denotes | all |
| GlycanIUPAC_T12 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G39143AQ" | denotes | all |
| GlycanIUPAC_T13 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G65149OO" | denotes | all |
| GlycanIUPAC_T14 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G02766SY" | denotes | all |
| GlycanIUPAC_T15 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G26019KJ" | denotes | all |
| GlycanIUPAC_T16 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G36429CZ" | denotes | all |
| GlycanIUPAC_T17 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G89633TP" | denotes | all |
| GlycanIUPAC_T18 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G28494FO" | denotes | all |
| GlycanIUPAC_T19 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G06219CP" | denotes | all |
| GlycanIUPAC_T20 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G44237SM" | denotes | all |
| GlycanIUPAC_T21 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G57948RL" | denotes | all |
| GlycanIUPAC_T22 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G64016DN" | denotes | all |
| GlycanIUPAC_T23 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G14536PC" | denotes | all |
| GlycanIUPAC_T24 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G14356FW" | denotes | all |
| GlycanIUPAC_T25 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G34565UO" | denotes | all |
| GlycanIUPAC_T26 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G67124MW" | denotes | all |
| GlycanIUPAC_T27 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G71457ZU" | denotes | all |
| GlycanIUPAC_T28 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G55228VZ" | denotes | all |
| GlycanIUPAC_T29 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G31034MJ" | denotes | all |
| GlycanIUPAC_T30 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G25776IP" | denotes | all |
| GlycanIUPAC_T31 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G64442BV" | denotes | all |
| GlycanIUPAC_T32 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G57018LE" | denotes | all |
| GlycanIUPAC_T33 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G61761GX" | denotes | all |
| GlycanIUPAC_T34 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G76318UX" | denotes | all |
| GlycanIUPAC_T35 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G61906ER" | denotes | all |
| GlycanIUPAC_T36 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G68723GR" | denotes | all |
| GlycanIUPAC_T37 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G19540LE" | denotes | all |
| GlycanIUPAC_T38 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G74944PO" | denotes | all |
| GlycanIUPAC_T39 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G89489ZJ" | denotes | all |
| GlycanIUPAC_T40 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G04434YU" | denotes | all |
| GlycanIUPAC_T41 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G21450PB" | denotes | all |
| GlycanIUPAC_T42 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G93629QY" | denotes | all |
| GlycanIUPAC_T43 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G02603TR" | denotes | all |
| GlycanIUPAC_T44 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G40280JP" | denotes | all |
| GlycanIUPAC_T45 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G95259IC" | denotes | all |
| GlycanIUPAC_T46 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G26900FE" | denotes | all |
| GlycanIUPAC_T47 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G21346KK" | denotes | all |
| GlycanIUPAC_T48 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G62509FF" | denotes | all |
| GlycanIUPAC_T49 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G83932AK" | denotes | all |
| GlycanIUPAC_T50 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G96978IB" | denotes | all |
| GlycanIUPAC_T51 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G34275DN" | denotes | all |
| GlycanIUPAC_T52 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G07071JF" | denotes | all |
| GlycanIUPAC_T53 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G80639QD" | denotes | all |
| GlycanIUPAC_T54 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G99460PJ" | denotes | all |
| GlycanIUPAC_T55 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G22024BZ" | denotes | all |
| GlycanIUPAC_T56 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G74097ZY" | denotes | all |
| GlycanIUPAC_T57 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G84439YP" | denotes | all |
| GlycanIUPAC_T58 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G52207WQ" | denotes | all |
| GlycanIUPAC_T59 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G90695MS" | denotes | all |
| GlycanIUPAC_T60 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G50398QX" | denotes | all |
| GlycanIUPAC_T61 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G12166ZT" | denotes | all |
| GlycanIUPAC_T62 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G48368BR" | denotes | all |
| GlycanIUPAC_T63 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G57407RW" | denotes | all |
| GlycanIUPAC_T64 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G00386TY" | denotes | all |
| GlycanIUPAC_T65 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G18723JK" | denotes | all |
| GlycanIUPAC_T66 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G93757OR" | denotes | all |
| GlycanIUPAC_T67 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G29006SI" | denotes | all |
| GlycanIUPAC_T68 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G03099OQ" | denotes | all |
| GlycanIUPAC_T69 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G53739OW" | denotes | all |
| GlycanIUPAC_T70 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G70440ZO" | denotes | all |
| GlycanIUPAC_T71 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G29951RR" | denotes | all |
| GlycanIUPAC_T72 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G58402TI" | denotes | all |
| GlycanIUPAC_T73 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G39875TP" | denotes | all |
| GlycanIUPAC_T74 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G83439QV" | denotes | all |
| GlycanIUPAC_T75 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G41762RC" | denotes | all |
| GlycanIUPAC_T76 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G91604UI" | denotes | all |
| GlycanIUPAC_T77 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G88447WE" | denotes | all |
| GlycanIUPAC_T78 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G93634BS" | denotes | all |
| GlycanIUPAC_T79 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G02587BH" | denotes | all |
| GlycanIUPAC_T80 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G43511MX" | denotes | all |
| GlycanIUPAC_T81 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G64958DH" | denotes | all |
| GlycanIUPAC_T82 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G30384TR" | denotes | all |
| GlycanIUPAC_T83 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G15624EX" | denotes | all |
| GlycanIUPAC_T84 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G22706ST" | denotes | all |
| GlycanIUPAC_T85 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G57408PI" | denotes | all |
| GlycanIUPAC_T86 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G86403XX" | denotes | all |
| GlycanIUPAC_T87 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G78043YB" | denotes | all |
| GlycanIUPAC_T88 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G18952JK" | denotes | all |
| GlycanIUPAC_T89 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G49020ND" | denotes | all |
| GlycanIUPAC_T90 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G63590YW" | denotes | all |
| GlycanIUPAC_T91 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G22793KS" | denotes | all |
| GlycanIUPAC_T92 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G64134SS" | denotes | all |
| GlycanIUPAC_T93 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G17338HY" | denotes | all |
| GlycanIUPAC_T94 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G99745XF" | denotes | all |
| GlycanIUPAC_T95 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G27782HN" | denotes | all |
| GlycanIUPAC_T96 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G57496DC" | denotes | all |
| GlycanIUPAC_T97 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G93169WB" | denotes | all |
| GlycanIUPAC_T98 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G05518TD" | denotes | all |
| GlycanIUPAC_T99 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G62603DN" | denotes | all |
| GlycanIUPAC_T100 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G59574FS" | denotes | all |
| GlycanIUPAC_T101 | 1601-1604 | "http://rdf.glycoinfo.org/glycan/G47567WC" | denotes | all |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 80-88 | OrganismTaxon | denotes | bacteria | 2|629395 |
| T3 | 90-98 | OrganismTaxon | denotes | Bacteria | 2|629395 |
| T5 | 935-951 | OrganismTaxon | denotes | Escherichia coli | 562 |
| T6 | 961-980 | OrganismTaxon | denotes | Salmonella enterica | 28901 |
| T7 | 1232-1252 | OrganismTaxon | denotes | Campylobacter jejuni | 197 |
| T8 | 1423-1445 | OrganismTaxon | denotes | Neisseria meningitidis | 487 |
| T9 | 1860-1868 | OrganismTaxon | denotes | bacteria | 2|629395 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 496-504 | Body_part | denotes | membrane | http://purl.obolibrary.org/obo/GO_0016020|http://purl.obolibrary.org/obo/UBERON_0000094|http://purl.obolibrary.org/obo/UBERON_0000158 |
| T4 | 691-706 | Body_part | denotes | plasma membrane | http://purl.obolibrary.org/obo/GO_0005886 |
| T5 | 1611-1624 | Body_part | denotes | transmembrane | http://purl.obolibrary.org/obo/GO_0016020 |