PubMed:20861084
Annnotations
Glycan-Motif
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 833-845 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | sialic acids |
| T2 | 1033-1039 | https://glytoucan.org/Structures/Glycans/G82576YO | denotes | fucose |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 833-845 | Glycan_Motif | denotes | sialic acids | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81533KY |
| T2 | 1033-1039 | Glycan_Motif | denotes | fucose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82576YO |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 92-100 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T2 | 128-136 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T3 | 189-197 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T4 | 239-244 | http://purl.obolibrary.org/obo/MAT_0000083 | denotes | blood |
| T5 | 239-244 | http://purl.obolibrary.org/obo/MAT_0000315 | denotes | blood |
| T6 | 291-299 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T7 | 319-327 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T8 | 464-472 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T9 | 697-705 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T10 | 878-886 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T11 | 1195-1203 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T12 | 1257-1265 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T13 | 1321-1329 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T14 | 1428-1436 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 833-845 | https://glytoucan.org/Structures/Glycans/G81533KY | denotes | sialic acids |
| T2 | 1033-1039 | https://glytoucan.org/Structures/Glycans/G82576YO | denotes | fucose |
PubmedHPO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 189-204 | HP_0012125 | denotes | prostate cancer |
| T2 | 198-204 | HP_0002664 | denotes | cancer |
| T3 | 291-306 | HP_0012125 | denotes | prostate cancer |
| T4 | 300-306 | HP_0002664 | denotes | cancer |
| T5 | 312-339 | HP_0008711 | denotes | benign prostate hyperplasia |
| T6 | 464-479 | HP_0012125 | denotes | prostate cancer |
| T7 | 473-479 | HP_0002664 | denotes | cancer |
| T8 | 697-712 | HP_0012125 | denotes | prostate cancer |
| T9 | 706-712 | HP_0002664 | denotes | cancer |
| T10 | 878-893 | HP_0012125 | denotes | prostate cancer |
| T11 | 887-893 | HP_0002664 | denotes | cancer |
| T12 | 1195-1210 | HP_0012125 | denotes | prostate cancer |
| T13 | 1204-1210 | HP_0002664 | denotes | cancer |
| T14 | 1257-1272 | HP_0012125 | denotes | prostate cancer |
| T15 | 1266-1272 | HP_0002664 | denotes | cancer |
| T16 | 1428-1443 | HP_0012125 | denotes | prostate cancer |
| T17 | 1437-1443 | HP_0002664 | denotes | cancer |
| T18 | 1795-1800 | HP_0002664 | denotes | tumor |
ICD10
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 128-148 | http://purl.bioontology.org/ontology/ICD10/N40 | denotes | prostate hyperplasia |
| T2 | 319-339 | http://purl.bioontology.org/ontology/ICD10/N40 | denotes | prostate hyperplasia |
GlycoBiology-FMA
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T1 | 46-51 | FMAID:167330 | denotes | serum |
| _T2 | 92-100 | FMAID:9600 | denotes | prostate |
| _T3 | 92-100 | FMAID:97485 | denotes | prostate |
| _T4 | 128-136 | FMAID:97485 | denotes | prostate |
| _T5 | 128-136 | FMAID:9600 | denotes | prostate |
| _T6 | 189-197 | FMAID:9600 | denotes | prostate |
| _T7 | 189-197 | FMAID:97485 | denotes | prostate |
| _T8 | 239-244 | FMAID:256053 | denotes | blood |
| _T9 | 251-255 | FMAID:178661 | denotes | test |
| _T10 | 291-299 | FMAID:9600 | denotes | prostate |
| _T11 | 291-299 | FMAID:97485 | denotes | prostate |
| _T12 | 319-327 | FMAID:97485 | denotes | prostate |
| _T13 | 319-327 | FMAID:9600 | denotes | prostate |
| _T14 | 464-472 | FMAID:97485 | denotes | prostate |
| _T15 | 464-472 | FMAID:9600 | denotes | prostate |
| _T16 | 527-532 | FMAID:167330 | denotes | serum |
| _T17 | 533-546 | FMAID:62925 | denotes | glycoproteins |
| _T18 | 533-546 | FMAID:167256 | denotes | glycoproteins |
| _T19 | 697-705 | FMAID:9600 | denotes | prostate |
| _T20 | 697-705 | FMAID:97485 | denotes | prostate |
| _T21 | 878-886 | FMAID:9600 | denotes | prostate |
| _T22 | 878-886 | FMAID:97485 | denotes | prostate |
| _T23 | 1029-1032 | FMAID:117478 | denotes | arm |
| _T24 | 1029-1032 | FMAID:24890 | denotes | arm |
| _T25 | 1033-1039 | FMAID:196784 | denotes | fucose |
| _T26 | 1033-1039 | FMAID:82790 | denotes | fucose |
| _T27 | 1195-1203 | FMAID:9600 | denotes | prostate |
| _T28 | 1195-1203 | FMAID:97485 | denotes | prostate |
| _T29 | 1257-1265 | FMAID:9600 | denotes | prostate |
| _T30 | 1257-1265 | FMAID:97485 | denotes | prostate |
| _T31 | 1315-1319 | FMAID:178661 | denotes | test |
| _T32 | 1321-1329 | FMAID:97485 | denotes | prostate |
| _T33 | 1321-1329 | FMAID:9600 | denotes | prostate |
| _T34 | 1428-1436 | FMAID:97485 | denotes | prostate |
| _T35 | 1428-1436 | FMAID:9600 | denotes | prostate |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1321-1346 | http://www.uniprot.org/uniprot/P07288 | denotes | prostate-specific antigen |
| T2 | 1321-1346 | http://www.uniprot.org/uniprot/Q16305 | denotes | prostate-specific antigen |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 101-107 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T2 | 198-204 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T3 | 300-306 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T4 | 473-479 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T5 | 706-712 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T6 | 887-893 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T7 | 1204-1210 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T8 | 1266-1272 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T9 | 1437-1443 | http://purl.bioontology.org/ontology/NCBITAXON/6754 | denotes | cancer |
| T10 | 1537-1544 | http://purl.bioontology.org/ontology/STY/T033 | denotes | finding |
| T11 | 1737-1747 | http://purl.bioontology.org/ontology/NCBITAXON/1385308 | denotes | perineural |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 5-17 | http://purl.obolibrary.org/obo/GO_0036065 | denotes | fucosylation |
| T2 | 785-796 | http://purl.obolibrary.org/obo/GO_0036065 | denotes | fucosylated |
| T3 | 1619-1630 | http://purl.obolibrary.org/obo/GO_0036065 | denotes | fucosylated |
| T4 | 31-42 | http://purl.obolibrary.org/obo/GO_0097503 | denotes | sialylation |
| T5 | 222-233 | http://purl.obolibrary.org/obo/GO_0032502 | denotes | development |
| T6 | 659-669 | http://purl.obolibrary.org/obo/GO_0007586 | denotes | digestions |
| T7 | 673-677 | http://purl.obolibrary.org/obo/GO_0004617 | denotes | sera |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-4 | http://purl.obolibrary.org/obo/GO_0019013 | denotes | Core |
| T2 | 780-784 | http://purl.obolibrary.org/obo/GO_0019013 | denotes | core |
| T3 | 1614-1618 | http://purl.obolibrary.org/obo/GO_0019013 | denotes | core |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 46-51 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| T2 | 527-532 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| T3 | 239-244 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T4 | 1029-1032 | http://purl.obolibrary.org/obo/UBERON_0001460 | denotes | arm |
Allie
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| SS1_20861084_1_0 | 312-339 | expanded | denotes | benign prostate hyperplasia |
| SS2_20861084_1_0 | 341-344 | abbr | denotes | BPH |
| AE1_20861084_1_0 | SS1_20861084_1_0 | SS2_20861084_1_0 | abbreviatedTo | benign prostate hyperplasia,BPH |
EDAM-topics
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 101-107 | http://edamontology.org/topic_2640 | denotes | cancer |
| T2 | 198-204 | http://edamontology.org/topic_2640 | denotes | cancer |
| T3 | 300-306 | http://edamontology.org/topic_2640 | denotes | cancer |
| T4 | 473-479 | http://edamontology.org/topic_2640 | denotes | cancer |
| T5 | 706-712 | http://edamontology.org/topic_2640 | denotes | cancer |
| T6 | 713-720 | http://edamontology.org/topic_3277 | denotes | samples |
| T7 | 887-893 | http://edamontology.org/topic_2640 | denotes | cancer |
| T8 | 1204-1210 | http://edamontology.org/topic_2640 | denotes | cancer |
| T9 | 1266-1272 | http://edamontology.org/topic_2640 | denotes | cancer |
| T10 | 1339-1346 | http://edamontology.org/topic_2830 | denotes | antigen |
| T11 | 1437-1443 | http://edamontology.org/topic_2640 | denotes | cancer |
| T12 | 1476-1483 | http://edamontology.org/topic_3678 | denotes | studies |
EDAM-DFO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 552-560 | http://edamontology.org/data_3108 | denotes | measured |
| T2 | 577-589 | http://edamontology.org/data_1426 | denotes | quantitative |
| T3 | 577-589 | http://edamontology.org/operation_3630 | denotes | quantitative |
| T4 | 615-623 | http://edamontology.org/operation_2945 | denotes | analysis |
| T5 | 733-738 | http://edamontology.org/data_1772 | denotes | score |
| T6 | 756-761 | http://edamontology.org/data_1772 | denotes | score |
| T7 | 1365-1376 | http://edamontology.org/data_3108 | denotes | measurement |
| T8 | 1465-1475 | http://edamontology.org/operation_2428 | denotes | validation |
| T9 | 1722-1731 | http://edamontology.org/operation_3465 | denotes | correlate |
| T10 | 1812-1819 | http://edamontology.org/operation_2423 | denotes | predict |
GlycoBiology-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 92-100 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T2 | 128-136 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T3 | 189-197 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T4 | 239-244 | http://purl.obolibrary.org/obo/MAT_0000315 | denotes | blood |
| T5 | 239-244 | http://purl.obolibrary.org/obo/MAT_0000083 | denotes | blood |
| T6 | 291-299 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T7 | 319-327 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T8 | 464-472 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T9 | 697-705 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T10 | 878-886 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T11 | 1195-1203 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T12 | 1257-1265 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T13 | 1321-1329 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
| T14 | 1428-1436 | http://purl.obolibrary.org/obo/MAT_0000078 | denotes | prostate |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-149 | Sentence | denotes | Core fucosylation and alpha2-3 sialylation in serum N-glycome is significantly increased in prostate cancer comparing to benign prostate hyperplasia. |
| TextSentencer_T2 | 150-346 | Sentence | denotes | One of the most urgent requirements in prostate cancer diagnosis is the development of a blood-based test which would be able to distinguish prostate cancer from benign prostate hyperplasia (BPH). |
| TextSentencer_T3 | 347-501 | Sentence | denotes | Previously published results found a significant difference between specific glycan levels in patients with advanced prostate cancer and healthy controls. |
| TextSentencer_T4 | 502-765 | Sentence | denotes | N-Glycans from the whole serum glycoproteins were measured using our fully quantitative high-throughput N-glycan analysis in combination with exoglycosidase digestions in sera from 13 BPH and 34 prostate cancer samples (17 Gleason score 5 and 17 Gleason score 7). |
| TextSentencer_T5 | 766-935 | Sentence | denotes | The levels of core-fucosylated biantennary glycans and α2-3-linked sialic acids were significantly increased in prostate cancer patients compared with patients with BPH. |
| TextSentencer_T6 | 936-1160 | Sentence | denotes | Triantennary trigalactosylated glycans and tetraantennary tetrasialylated glycans with outer arm fucose were significantly decreased, and tetraantennary tetrasialylated glycans increased in Gleason 7 compared with Gleason 5. |
| TextSentencer_T7 | 1161-1444 | Sentence | denotes | All these glycans can distinguish prostate cancer patients from BPH or Gleason 7 from Gleason 5 prostate cancer patients better than the current clinical test, prostate-specific antigen; therefore, their measurement may provide a new noninvasive approach to diagnose prostate cancer. |
| TextSentencer_T8 | 1445-1545 | Sentence | denotes | However, additional validation studies would need to be carried out to further support this finding. |
| TextSentencer_T9 | 1546-1839 | Sentence | denotes | Decreases in triantennary trigalactosylated glycans and/or bisected core-fucosylated biantennary monosialylated glycans and increases in tetraantennary tetrasialylated glycans correlate with perineural invasion, which could further help to diagnose tumor spread and predict patients' survival. |
| T1 | 0-149 | Sentence | denotes | Core fucosylation and alpha2-3 sialylation in serum N-glycome is significantly increased in prostate cancer comparing to benign prostate hyperplasia. |
| T2 | 150-346 | Sentence | denotes | One of the most urgent requirements in prostate cancer diagnosis is the development of a blood-based test which would be able to distinguish prostate cancer from benign prostate hyperplasia (BPH). |
| T3 | 347-501 | Sentence | denotes | Previously published results found a significant difference between specific glycan levels in patients with advanced prostate cancer and healthy controls. |
| T4 | 502-765 | Sentence | denotes | N-Glycans from the whole serum glycoproteins were measured using our fully quantitative high-throughput N-glycan analysis in combination with exoglycosidase digestions in sera from 13 BPH and 34 prostate cancer samples (17 Gleason score 5 and 17 Gleason score 7). |
| T5 | 766-935 | Sentence | denotes | The levels of core-fucosylated biantennary glycans and α2-3-linked sialic acids were significantly increased in prostate cancer patients compared with patients with BPH. |
| T6 | 936-1160 | Sentence | denotes | Triantennary trigalactosylated glycans and tetraantennary tetrasialylated glycans with outer arm fucose were significantly decreased, and tetraantennary tetrasialylated glycans increased in Gleason 7 compared with Gleason 5. |
| T7 | 1161-1444 | Sentence | denotes | All these glycans can distinguish prostate cancer patients from BPH or Gleason 7 from Gleason 5 prostate cancer patients better than the current clinical test, prostate-specific antigen; therefore, their measurement may provide a new noninvasive approach to diagnose prostate cancer. |
| T8 | 1445-1545 | Sentence | denotes | However, additional validation studies would need to be carried out to further support this finding. |
| T9 | 1546-1839 | Sentence | denotes | Decreases in triantennary trigalactosylated glycans and/or bisected core-fucosylated biantennary monosialylated glycans and increases in tetraantennary tetrasialylated glycans correlate with perineural invasion, which could further help to diagnose tumor spread and predict patients' survival. |
| T1 | 0-149 | Sentence | denotes | Core fucosylation and alpha2-3 sialylation in serum N-glycome is significantly increased in prostate cancer comparing to benign prostate hyperplasia. |
| T2 | 150-346 | Sentence | denotes | One of the most urgent requirements in prostate cancer diagnosis is the development of a blood-based test which would be able to distinguish prostate cancer from benign prostate hyperplasia (BPH). |
| T3 | 347-501 | Sentence | denotes | Previously published results found a significant difference between specific glycan levels in patients with advanced prostate cancer and healthy controls. |
| T4 | 502-765 | Sentence | denotes | N-Glycans from the whole serum glycoproteins were measured using our fully quantitative high-throughput N-glycan analysis in combination with exoglycosidase digestions in sera from 13 BPH and 34 prostate cancer samples (17 Gleason score 5 and 17 Gleason score 7). |
| T5 | 766-935 | Sentence | denotes | The levels of core-fucosylated biantennary glycans and α2-3-linked sialic acids were significantly increased in prostate cancer patients compared with patients with BPH. |
| T6 | 936-1160 | Sentence | denotes | Triantennary trigalactosylated glycans and tetraantennary tetrasialylated glycans with outer arm fucose were significantly decreased, and tetraantennary tetrasialylated glycans increased in Gleason 7 compared with Gleason 5. |
| T7 | 1161-1444 | Sentence | denotes | All these glycans can distinguish prostate cancer patients from BPH or Gleason 7 from Gleason 5 prostate cancer patients better than the current clinical test, prostate-specific antigen; therefore, their measurement may provide a new noninvasive approach to diagnose prostate cancer. |
| T8 | 1445-1545 | Sentence | denotes | However, additional validation studies would need to be carried out to further support this finding. |
| T9 | 1546-1839 | Sentence | denotes | Decreases in triantennary trigalactosylated glycans and/or bisected core-fucosylated biantennary monosialylated glycans and increases in tetraantennary tetrasialylated glycans correlate with perineural invasion, which could further help to diagnose tumor spread and predict patients' survival. |
GlycoBiology-Motifs
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 502-511 | http://rdf.glycoinfo.org/glycan/G00027MO | denotes | N-Glycans |
| T2 | 606-614 | http://rdf.glycoinfo.org/glycan/G00027MO | denotes | N-glycan |
GlyTouCan-IUPAC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| GlycanIUPAC_T1 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G41652MJ" | denotes | All |
| GlycanIUPAC_T2 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G20761YC" | denotes | All |
| GlycanIUPAC_T3 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G19807HM" | denotes | All |
| GlycanIUPAC_T4 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G20351TE" | denotes | All |
| GlycanIUPAC_T5 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G71957MR" | denotes | All |
| GlycanIUPAC_T6 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G59040AE" | denotes | All |
| GlycanIUPAC_T7 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G14987PW" | denotes | All |
| GlycanIUPAC_T8 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G95064PC" | denotes | All |
| GlycanIUPAC_T9 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G39143AQ" | denotes | All |
| GlycanIUPAC_T10 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G65149OO" | denotes | All |
| GlycanIUPAC_T11 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G02766SY" | denotes | All |
| GlycanIUPAC_T12 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G26019KJ" | denotes | All |
| GlycanIUPAC_T13 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G36429CZ" | denotes | All |
| GlycanIUPAC_T14 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G89633TP" | denotes | All |
| GlycanIUPAC_T15 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G28494FO" | denotes | All |
| GlycanIUPAC_T16 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G06219CP" | denotes | All |
| GlycanIUPAC_T17 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G44237SM" | denotes | All |
| GlycanIUPAC_T18 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G57948RL" | denotes | All |
| GlycanIUPAC_T19 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G64016DN" | denotes | All |
| GlycanIUPAC_T20 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G14536PC" | denotes | All |
| GlycanIUPAC_T21 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G14356FW" | denotes | All |
| GlycanIUPAC_T22 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G34565UO" | denotes | All |
| GlycanIUPAC_T23 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G67124MW" | denotes | All |
| GlycanIUPAC_T24 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G71457ZU" | denotes | All |
| GlycanIUPAC_T25 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G55228VZ" | denotes | All |
| GlycanIUPAC_T26 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G31034MJ" | denotes | All |
| GlycanIUPAC_T27 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G25776IP" | denotes | All |
| GlycanIUPAC_T28 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G64442BV" | denotes | All |
| GlycanIUPAC_T29 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G57018LE" | denotes | All |
| GlycanIUPAC_T30 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G61761GX" | denotes | All |
| GlycanIUPAC_T31 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G76318UX" | denotes | All |
| GlycanIUPAC_T32 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G61906ER" | denotes | All |
| GlycanIUPAC_T33 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G68723GR" | denotes | All |
| GlycanIUPAC_T34 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G19540LE" | denotes | All |
| GlycanIUPAC_T35 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G74944PO" | denotes | All |
| GlycanIUPAC_T36 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G89489ZJ" | denotes | All |
| GlycanIUPAC_T37 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G04434YU" | denotes | All |
| GlycanIUPAC_T38 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G21450PB" | denotes | All |
| GlycanIUPAC_T39 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G93629QY" | denotes | All |
| GlycanIUPAC_T40 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G02603TR" | denotes | All |
| GlycanIUPAC_T41 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G40280JP" | denotes | All |
| GlycanIUPAC_T42 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G95259IC" | denotes | All |
| GlycanIUPAC_T43 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G26900FE" | denotes | All |
| GlycanIUPAC_T44 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G21346KK" | denotes | All |
| GlycanIUPAC_T45 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G62509FF" | denotes | All |
| GlycanIUPAC_T46 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G83932AK" | denotes | All |
| GlycanIUPAC_T47 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G96978IB" | denotes | All |
| GlycanIUPAC_T48 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G34275DN" | denotes | All |
| GlycanIUPAC_T49 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G07071JF" | denotes | All |
| GlycanIUPAC_T50 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G80639QD" | denotes | All |
| GlycanIUPAC_T51 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G99460PJ" | denotes | All |
| GlycanIUPAC_T52 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G22024BZ" | denotes | All |
| GlycanIUPAC_T53 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G74097ZY" | denotes | All |
| GlycanIUPAC_T54 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G84439YP" | denotes | All |
| GlycanIUPAC_T55 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G52207WQ" | denotes | All |
| GlycanIUPAC_T56 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G90695MS" | denotes | All |
| GlycanIUPAC_T57 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G50398QX" | denotes | All |
| GlycanIUPAC_T58 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G12166ZT" | denotes | All |
| GlycanIUPAC_T59 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G48368BR" | denotes | All |
| GlycanIUPAC_T60 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G57407RW" | denotes | All |
| GlycanIUPAC_T61 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G00386TY" | denotes | All |
| GlycanIUPAC_T62 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G18723JK" | denotes | All |
| GlycanIUPAC_T63 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G93757OR" | denotes | All |
| GlycanIUPAC_T64 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G29006SI" | denotes | All |
| GlycanIUPAC_T65 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G03099OQ" | denotes | All |
| GlycanIUPAC_T66 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G53739OW" | denotes | All |
| GlycanIUPAC_T67 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G70440ZO" | denotes | All |
| GlycanIUPAC_T68 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G29951RR" | denotes | All |
| GlycanIUPAC_T69 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G58402TI" | denotes | All |
| GlycanIUPAC_T70 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G39875TP" | denotes | All |
| GlycanIUPAC_T71 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G83439QV" | denotes | All |
| GlycanIUPAC_T72 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G41762RC" | denotes | All |
| GlycanIUPAC_T73 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G91604UI" | denotes | All |
| GlycanIUPAC_T74 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G88447WE" | denotes | All |
| GlycanIUPAC_T75 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G93634BS" | denotes | All |
| GlycanIUPAC_T76 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G02587BH" | denotes | All |
| GlycanIUPAC_T77 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G43511MX" | denotes | All |
| GlycanIUPAC_T78 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G64958DH" | denotes | All |
| GlycanIUPAC_T79 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G30384TR" | denotes | All |
| GlycanIUPAC_T80 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G15624EX" | denotes | All |
| GlycanIUPAC_T81 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G22706ST" | denotes | All |
| GlycanIUPAC_T82 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G57408PI" | denotes | All |
| GlycanIUPAC_T83 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G86403XX" | denotes | All |
| GlycanIUPAC_T84 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G78043YB" | denotes | All |
| GlycanIUPAC_T85 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G18952JK" | denotes | All |
| GlycanIUPAC_T86 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G49020ND" | denotes | All |
| GlycanIUPAC_T87 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G63590YW" | denotes | All |
| GlycanIUPAC_T88 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G22793KS" | denotes | All |
| GlycanIUPAC_T89 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G64134SS" | denotes | All |
| GlycanIUPAC_T90 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G17338HY" | denotes | All |
| GlycanIUPAC_T91 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G99745XF" | denotes | All |
| GlycanIUPAC_T92 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G27782HN" | denotes | All |
| GlycanIUPAC_T93 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G57496DC" | denotes | All |
| GlycanIUPAC_T94 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G93169WB" | denotes | All |
| GlycanIUPAC_T95 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G05518TD" | denotes | All |
| GlycanIUPAC_T96 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G62603DN" | denotes | All |
| GlycanIUPAC_T97 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G59574FS" | denotes | All |
| GlycanIUPAC_T98 | 1161-1164 | "http://rdf.glycoinfo.org/glycan/G47567WC" | denotes | All |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 239-244 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| PD-UBERON-AE-B_T2 | 46-51 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| PD-UBERON-AE-B_T3 | 527-532 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| PD-UBERON-AE-B_T4 | 1029-1032 | http://purl.obolibrary.org/obo/UBERON_0001460 | denotes | arm |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 92-107 | Disease | denotes | prostate cancer | http://purl.obolibrary.org/obo/MONDO_0008315 |
| T2 | 121-148 | Disease | denotes | benign prostate hyperplasia | http://purl.obolibrary.org/obo/MONDO_0010811 |
| T3 | 189-204 | Disease | denotes | prostate cancer | http://purl.obolibrary.org/obo/MONDO_0008315 |
| T4 | 291-306 | Disease | denotes | prostate cancer | http://purl.obolibrary.org/obo/MONDO_0008315 |
| T5 | 312-339 | Disease | denotes | benign prostate hyperplasia | http://purl.obolibrary.org/obo/MONDO_0010811 |
| T6 | 341-344 | Disease | denotes | BPH | http://purl.obolibrary.org/obo/MONDO_0010811 |
| T7 | 464-479 | Disease | denotes | prostate cancer | http://purl.obolibrary.org/obo/MONDO_0008315 |
| T8 | 686-689 | Disease | denotes | BPH | http://purl.obolibrary.org/obo/MONDO_0010811 |
| T9 | 697-712 | Disease | denotes | prostate cancer | http://purl.obolibrary.org/obo/MONDO_0008315 |
| T10 | 878-893 | Disease | denotes | prostate cancer | http://purl.obolibrary.org/obo/MONDO_0008315 |
| T11 | 931-934 | Disease | denotes | BPH | http://purl.obolibrary.org/obo/MONDO_0010811 |
| T12 | 1195-1210 | Disease | denotes | prostate cancer | http://purl.obolibrary.org/obo/MONDO_0008315 |
| T13 | 1225-1228 | Disease | denotes | BPH | http://purl.obolibrary.org/obo/MONDO_0010811 |
| T14 | 1257-1272 | Disease | denotes | prostate cancer | http://purl.obolibrary.org/obo/MONDO_0008315 |
| T15 | 1428-1443 | Disease | denotes | prostate cancer | http://purl.obolibrary.org/obo/MONDO_0008315 |
| T16 | 1795-1800 | Disease | denotes | tumor | http://purl.obolibrary.org/obo/MONDO_0005070 |
HP-phenotype
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 92-107 | Phenotype | denotes | prostate cancer | HP:0012125 |
| T2 | 121-148 | Phenotype | denotes | benign prostate hyperplasia | HP:0008711 |
| T3 | 189-204 | Phenotype | denotes | prostate cancer | HP:0012125 |
| T4 | 291-306 | Phenotype | denotes | prostate cancer | HP:0012125 |
| T5 | 312-339 | Phenotype | denotes | benign prostate hyperplasia | HP:0008711 |
| T6 | 341-344 | Phenotype | denotes | BPH | HP:0008711 |
| T7 | 464-479 | Phenotype | denotes | prostate cancer | HP:0012125 |
| T8 | 686-689 | Phenotype | denotes | BPH | HP:0008711 |
| T9 | 697-712 | Phenotype | denotes | prostate cancer | HP:0012125 |
| T10 | 878-893 | Phenotype | denotes | prostate cancer | HP:0012125 |
| T11 | 931-934 | Phenotype | denotes | BPH | HP:0008711 |
| T12 | 1195-1210 | Phenotype | denotes | prostate cancer | HP:0012125 |
| T13 | 1225-1228 | Phenotype | denotes | BPH | HP:0008711 |
| T14 | 1257-1272 | Phenotype | denotes | prostate cancer | HP:0012125 |
| T15 | 1428-1443 | Phenotype | denotes | prostate cancer | HP:0012125 |
| T16 | 1795-1800 | Phenotype | denotes | tumor | HP:0002664 |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 92-100 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/MAT_0000078 |
| T2 | 128-136 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/MAT_0000078 |
| T3 | 189-197 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/MAT_0000078 |
| T4 | 239-244 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/MAT_0000083|http://purl.obolibrary.org/obo/MAT_0000315 |
| T6 | 291-299 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/MAT_0000078 |
| T7 | 319-327 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/MAT_0000078 |
| T8 | 464-472 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/MAT_0000078 |
| T9 | 697-705 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/MAT_0000078 |
| T10 | 878-886 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/MAT_0000078 |
| T11 | 1195-1203 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/MAT_0000078 |
| T12 | 1257-1265 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/MAT_0000078 |
| T13 | 1321-1329 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/MAT_0000078 |
| T14 | 1428-1436 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/MAT_0000078 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 92-100 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/UBERON_0002367 |
| T2 | 128-136 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/UBERON_0002367 |
| T3 | 189-197 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/UBERON_0002367 |
| T4 | 239-244 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T5 | 291-299 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/UBERON_0002367 |
| T6 | 319-327 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/UBERON_0002367 |
| T7 | 464-472 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/UBERON_0002367 |
| T8 | 697-705 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/UBERON_0002367 |
| T9 | 878-886 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/UBERON_0002367 |
| T10 | 1029-1032 | Body_part | denotes | arm | http://purl.obolibrary.org/obo/UBERON_0001460|http://purl.obolibrary.org/obo/UBERON_0003822 |
| T12 | 1195-1203 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/UBERON_0002367 |
| T13 | 1257-1265 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/UBERON_0002367 |
| T14 | 1321-1329 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/UBERON_0002367 |
| T15 | 1428-1436 | Body_part | denotes | prostate | http://purl.obolibrary.org/obo/UBERON_0002367 |