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PubMed:20854438 / 0-260 JSONTXT

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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-74 Sentence denotes SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.
T2 75-86 Sentence denotes BACKGROUND:

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
8088 0-6 GeneOrGeneProduct denotes SLURP1 NCBIGene:57152
8089 60-73 DiseaseOrPhenotypicFeature denotes mal de Meleda MESH:D007645
8090 87-100 DiseaseOrPhenotypicFeature denotes Mal de Meleda MESH:D007645
8091 102-105 DiseaseOrPhenotypicFeature denotes MDM MESH:D007645
8092 110-141 DiseaseOrPhenotypicFeature denotes palmoplantar erythrokeratoderma MESH:C563781
8093 231-238 GeneOrGeneProduct denotes SLURP-1 NCBIGene:57152
8094 240-260 GeneOrGeneProduct denotes lymphocyte antigen 6 NCBIGene:57152

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 60-73 DiseaseOrPhenotypicFeature denotes mal de Meleda 0009552
T2 87-100 DiseaseOrPhenotypicFeature denotes Mal de Meleda 0009552
T3 123-141 DiseaseOrPhenotypicFeature denotes erythrokeratoderma 0019270
T4 170-181 DiseaseOrPhenotypicFeature denotes inheritance 0021152

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 0-6 GeneOrGeneProduct denotes SLURP1
T2 7-15 GeneOrGeneProduct denotes mutation
T3 27-31 GeneOrGeneProduct denotes cell
T4 32-42 GeneOrGeneProduct denotes activation
T5 60-63 GeneOrGeneProduct denotes mal
T6 87-90 GeneOrGeneProduct denotes Mal
T7 201-209 GeneOrGeneProduct denotes mutation
T8 231-238 GeneOrGeneProduct denotes SLURP-1
T9 240-258 GeneOrGeneProduct denotes lymphocyte antigen

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 0-6 GeneOrGeneProduct denotes SLURP1
T2 27-31 GeneOrGeneProduct denotes cell
T3 60-63 GeneOrGeneProduct denotes mal
T4 87-90 GeneOrGeneProduct denotes Mal
T5 231-238 GeneOrGeneProduct denotes SLURP-1
T6 240-258 GeneOrGeneProduct denotes lymphocyte antigen

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 60-73 DiseaseOrPhenotypicFeature denotes mal de Meleda D007645
T2 87-100 DiseaseOrPhenotypicFeature denotes Mal de Meleda D007645
T3 102-105 DiseaseOrPhenotypicFeature denotes MDM D007645

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 0-6 GeneOrGeneProduct denotes SLURP1
T2 60-63 GeneOrGeneProduct denotes mal
T3 87-90 GeneOrGeneProduct denotes Mal
T4 231-238 GeneOrGeneProduct denotes SLURP-1
T5 240-258 GeneOrGeneProduct denotes lymphocyte antigen

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 60-73 DiseaseOrPhenotypicFeature denotes mal de Meleda 0009552
T2 87-100 DiseaseOrPhenotypicFeature denotes Mal de Meleda 0009552
T3 102-105 DiseaseOrPhenotypicFeature denotes MDM 0009552
T4 123-141 DiseaseOrPhenotypicFeature denotes erythrokeratoderma 0019270

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 60-73 DiseaseOrPhenotypicFeature denotes mal de Meleda D007645
T2 87-100 DiseaseOrPhenotypicFeature denotes Mal de Meleda D007645
T3 102-105 DiseaseOrPhenotypicFeature denotes MDM D007645
T4 110-141 DiseaseOrPhenotypicFeature denotes palmoplantar erythrokeratoderma DISEASE

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 60-73 DiseaseOrPhenotypicFeature denotes mal de Meleda D007645
T2 87-100 DiseaseOrPhenotypicFeature denotes Mal de Meleda D007645
T3 102-105 DiseaseOrPhenotypicFeature denotes MDM D007645
T4 110-141 DiseaseOrPhenotypicFeature denotes palmoplantar erythrokeratoderma DISEASE

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 60-63 ChemicalEntity denotes mal http://purl.obolibrary.org/obo/CHEBI_15595

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T1 60-63 ChemicalEntity denotes mal http://purl.obolibrary.org/obo/CHEBI_15595
T5 240-258 GeneOrGeneProduct denotes lymphocyte antigen
T14785 231-238 GeneOrGeneProduct denotes SLURP-1
T3 87-90 GeneOrGeneProduct denotes Mal
T72236 60-63 GeneOrGeneProduct denotes mal
T76591 0-6 GeneOrGeneProduct denotes SLURP1
T15789 110-141 DiseaseOrPhenotypicFeature denotes palmoplantar erythrokeratoderma DISEASE
T83571 102-105 DiseaseOrPhenotypicFeature denotes MDM D007645
T36030 87-100 DiseaseOrPhenotypicFeature denotes Mal de Meleda D007645
T36666 60-73 DiseaseOrPhenotypicFeature denotes mal de Meleda D007645

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 150-181 HP_0000007 denotes autosomal recessive inheritance
T2 150-169 HP_0000007 denotes autosomal recessive

Allie

Id Subject Object Predicate Lexical cue
SS1_20854438_2_0 87-100 expanded denotes Mal de Meleda
SS2_20854438_2_0 102-105 abbr denotes MDM
AE1_20854438_2_0 SS1_20854438_2_0 SS2_20854438_2_0 abbreviatedTo Mal de Meleda,MDM

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
20854438-1#153#171#gene3111 240-258 gene3111 denotes lymphocyte antigen
20854438-1#0#13#diseaseC0025221 87-100 diseaseC0025221 denotes Mal de Meleda
20854438-1#15#18#diseaseC0025221 102-105 diseaseC0025221 denotes MDM
20854438-1#0#13#diseaseC0025221 87-100 diseaseC0025221 denotes Mal de Meleda
20854438-1#15#18#diseaseC0025221 102-105 diseaseC0025221 denotes MDM
153#171#gene31110#13#diseaseC0025221 20854438-1#153#171#gene3111 20854438-1#0#13#diseaseC0025221 associated_with lymphocyte antigen,Mal de Meleda
153#171#gene311115#18#diseaseC0025221 20854438-1#153#171#gene3111 20854438-1#15#18#diseaseC0025221 associated_with lymphocyte antigen,MDM
153#171#gene31110#13#diseaseC0025221 20854438-1#153#171#gene3111 20854438-1#0#13#diseaseC0025221 associated_with lymphocyte antigen,Mal de Meleda
153#171#gene311115#18#diseaseC0025221 20854438-1#153#171#gene3111 20854438-1#15#18#diseaseC0025221 associated_with lymphocyte antigen,MDM