PubMed:20854438
Annnotations
PubTator4TogoVar
{"project":"PubTator4TogoVar","denotations":[{"id":"20854438_0","span":{"begin":1182,"end":1231},"obj":"ProteinMutation"},{"id":"20854438_1","span":{"begin":1233,"end":1237},"obj":"ProteinMutation"},{"id":"20854438_2","span":{"begin":1496,"end":1500},"obj":"ProteinMutation"},{"id":"20854438_3","span":{"begin":1688,"end":1692},"obj":"ProteinMutation"}],"attributes":[{"id":"20854438_0_ProteinMutation","pred":"proteinmutation","subj":"20854438_0","obj":"rs28937888"},{"id":"20854438_1_ProteinMutation","pred":"proteinmutation","subj":"20854438_1","obj":"rs28937888"},{"id":"20854438_2_ProteinMutation","pred":"proteinmutation","subj":"20854438_2","obj":"rs28937888"},{"id":"20854438_3_ProteinMutation","pred":"proteinmutation","subj":"20854438_3","obj":"rs28937888"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-entities-OrganismTaxon-PD
{"project":"LitCoin-entities-OrganismTaxon-PD","denotations":[{"id":"T1","span":{"begin":1002,"end":1007},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":1606,"end":1611},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"NCBItxid:9606"},{"id":"A2","pred":"db_id","subj":"T2","obj":"NCBItxid:9606"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-sentences
{"project":"LitCoin-sentences","denotations":[{"id":"T1","span":{"begin":0,"end":74},"obj":"Sentence"},{"id":"T2","span":{"begin":75,"end":86},"obj":"Sentence"},{"id":"T3","span":{"begin":87,"end":326},"obj":"Sentence"},{"id":"T4","span":{"begin":327,"end":447},"obj":"Sentence"},{"id":"T5","span":{"begin":448,"end":560},"obj":"Sentence"},{"id":"T6","span":{"begin":561,"end":809},"obj":"Sentence"},{"id":"T7","span":{"begin":810,"end":821},"obj":"Sentence"},{"id":"T8","span":{"begin":822,"end":935},"obj":"Sentence"},{"id":"T9","span":{"begin":936,"end":992},"obj":"Sentence"},{"id":"T10","span":{"begin":993,"end":1001},"obj":"Sentence"},{"id":"T11","span":{"begin":1002,"end":1262},"obj":"Sentence"},{"id":"T12","span":{"begin":1263,"end":1435},"obj":"Sentence"},{"id":"T13","span":{"begin":1436,"end":1542},"obj":"Sentence"},{"id":"T14","span":{"begin":1543,"end":1628},"obj":"Sentence"},{"id":"T15","span":{"begin":1629,"end":1641},"obj":"Sentence"},{"id":"T16","span":{"begin":1642,"end":1741},"obj":"Sentence"},{"id":"T17","span":{"begin":1742,"end":1818},"obj":"Sentence"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-entities
{"project":"LitCoin-entities","denotations":[{"id":"8088","span":{"begin":0,"end":6},"obj":"GeneOrGeneProduct"},{"id":"8089","span":{"begin":60,"end":73},"obj":"DiseaseOrPhenotypicFeature"},{"id":"8090","span":{"begin":87,"end":100},"obj":"DiseaseOrPhenotypicFeature"},{"id":"8091","span":{"begin":102,"end":105},"obj":"DiseaseOrPhenotypicFeature"},{"id":"8092","span":{"begin":110,"end":141},"obj":"DiseaseOrPhenotypicFeature"},{"id":"8093","span":{"begin":231,"end":238},"obj":"GeneOrGeneProduct"},{"id":"8094","span":{"begin":240,"end":260},"obj":"GeneOrGeneProduct"},{"id":"8095","span":{"begin":261,"end":324},"obj":"GeneOrGeneProduct"},{"id":"8096","span":{"begin":327,"end":334},"obj":"GeneOrGeneProduct"},{"id":"8097","span":{"begin":367,"end":399},"obj":"GeneOrGeneProduct"},{"id":"8098","span":{"begin":401,"end":406},"obj":"GeneOrGeneProduct"},{"id":"8099","span":{"begin":461,"end":467},"obj":"OrganismTaxon"},{"id":"8100","span":{"begin":492,"end":497},"obj":"GeneOrGeneProduct"},{"id":"8101","span":{"begin":587,"end":595},"obj":"OrganismTaxon"},{"id":"8102","span":{"begin":616,"end":622},"obj":"GeneOrGeneProduct"},{"id":"8103","span":{"begin":683,"end":691},"obj":"DiseaseOrPhenotypicFeature"},{"id":"8104","span":{"begin":696,"end":711},"obj":"DiseaseOrPhenotypicFeature"},{"id":"8105","span":{"begin":860,"end":866},"obj":"GeneOrGeneProduct"},{"id":"8106","span":{"begin":931,"end":934},"obj":"DiseaseOrPhenotypicFeature"},{"id":"8107","span":{"begin":949,"end":956},"obj":"GeneOrGeneProduct"},{"id":"8108","span":{"begin":1002,"end":1007},"obj":"OrganismTaxon"},{"id":"8109","span":{"begin":1082,"end":1085},"obj":"DiseaseOrPhenotypicFeature"},{"id":"8110","span":{"begin":1105,"end":1142},"obj":"SequenceVariant"},{"id":"8111","span":{"begin":1150,"end":1156},"obj":"GeneOrGeneProduct"},{"id":"8112","span":{"begin":1182,"end":1231},"obj":"SequenceVariant"},{"id":"8113","span":{"begin":1233,"end":1237},"obj":"SequenceVariant"},{"id":"8114","span":{"begin":1246,"end":1253},"obj":"GeneOrGeneProduct"},{"id":"8115","span":{"begin":1335,"end":1338},"obj":"GeneOrGeneProduct"},{"id":"8116","span":{"begin":1344,"end":1348},"obj":"GeneOrGeneProduct"},{"id":"8117","span":{"begin":1488,"end":1495},"obj":"GeneOrGeneProduct"},{"id":"8118","span":{"begin":1496,"end":1500},"obj":"SequenceVariant"},{"id":"8119","span":{"begin":1606,"end":1611},"obj":"OrganismTaxon"},{"id":"8120","span":{"begin":1612,"end":1619},"obj":"GeneOrGeneProduct"},{"id":"8121","span":{"begin":1642,"end":1650},"obj":"OrganismTaxon"},{"id":"8122","span":{"begin":1656,"end":1659},"obj":"DiseaseOrPhenotypicFeature"},{"id":"8123","span":{"begin":1680,"end":1687},"obj":"GeneOrGeneProduct"},{"id":"8124","span":{"begin":1688,"end":1692},"obj":"SequenceVariant"},{"id":"8125","span":{"begin":1768,"end":1775},"obj":"GeneOrGeneProduct"}],"attributes":[{"id":"A1","pred":"db_id","subj":"8088","obj":"NCBIGene:57152"},{"id":"A2","pred":"db_id","subj":"8089","obj":"MESH:D007645"},{"id":"A3","pred":"db_id","subj":"8090","obj":"MESH:D007645"},{"id":"A4","pred":"db_id","subj":"8091","obj":"MESH:D007645"},{"id":"A5","pred":"db_id","subj":"8092","obj":"MESH:C563781"},{"id":"A6","pred":"db_id","subj":"8093","obj":"NCBIGene:57152"},{"id":"A7","pred":"db_id","subj":"8094","obj":"NCBIGene:57152"},{"id":"A8","pred":"db_id","subj":"8095","obj":"NCBIGene:57152"},{"id":"A9","pred":"db_id","subj":"8096","obj":"NCBIGene:57152"},{"id":"A10","pred":"db_id","subj":"8097","obj":"NCBIGene:1137"},{"id":"A11","pred":"db_id","subj":"8098","obj":"NCBIGene:1137"},{"id":"A12","pred":"db_id","subj":"8099","obj":"NCBITaxon:10090"},{"id":"A13","pred":"db_id","subj":"8100","obj":"NCBIGene:11441"},{"id":"A14","pred":"db_id","subj":"8101","obj":"NCBITaxon:9606"},{"id":"A15","pred":"db_id","subj":"8102","obj":"NCBIGene:57152"},{"id":"A16","pred":"db_id","subj":"8103","obj":"MESH:D008545"},{"id":"A17","pred":"db_id","subj":"8104","obj":"MESH:D014777"},{"id":"A18","pred":"db_id","subj":"8105","obj":"NCBIGene:57152"},{"id":"A19","pred":"db_id","subj":"8106","obj":"MESH:D007645"},{"id":"A20","pred":"db_id","subj":"8107","obj":"NCBIGene:57152"},{"id":"A21","pred":"db_id","subj":"8108","obj":"NCBITaxon:9606"},{"id":"A22","pred":"db_id","subj":"8109","obj":"MESH:D007645"},{"id":"A23","pred":"db_id","subj":"8110","obj":"DBSNP:rs28937888"},{"id":"A24","pred":"db_id","subj":"8111","obj":"NCBIGene:57152"},{"id":"A25","pred":"db_id","subj":"8112","obj":"DBSNP:rs28937888"},{"id":"A26","pred":"db_id","subj":"8113","obj":"DBSNP:rs28937888"},{"id":"A27","pred":"db_id","subj":"8114","obj":"NCBIGene:57152"},{"id":"A28","pred":"db_id","subj":"8115","obj":"NCBIGene:915"},{"id":"A29","pred":"db_id","subj":"8116","obj":"NCBIGene:940"},{"id":"A30","pred":"db_id","subj":"8117","obj":"NCBIGene:57152"},{"id":"A31","pred":"db_id","subj":"8118","obj":"DBSNP:rs28937888"},{"id":"A32","pred":"db_id","subj":"8119","obj":"NCBITaxon:9606"},{"id":"A33","pred":"db_id","subj":"8120","obj":"NCBIGene:57152"},{"id":"A34","pred":"db_id","subj":"8121","obj":"NCBITaxon:9606"},{"id":"A35","pred":"db_id","subj":"8122","obj":"MESH:D007645"},{"id":"A36","pred":"db_id","subj":"8123","obj":"NCBIGene:57152"},{"id":"A37","pred":"db_id","subj":"8124","obj":"DBSNP:rs28937888"},{"id":"A38","pred":"db_id","subj":"8125","obj":"NCBIGene:57152"}],"namespaces":[{"prefix":"_base","uri":"https://w3id.org/biolink/vocab/"},{"prefix":"MESH","uri":"http://id.nlm.nih.gov/mesh/"},{"prefix":"NCBITaxon","uri":"https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id="},{"prefix":"NCBIGene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"OMIM","uri":"https://www.omim.org/entry/"},{"prefix":"DBSNP","uri":"https://www.ncbi.nlm.nih.gov/snp/"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin_Mondo
{"project":"LitCoin_Mondo","denotations":[{"id":"T1","span":{"begin":60,"end":73},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T2","span":{"begin":87,"end":100},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T3","span":{"begin":123,"end":141},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T4","span":{"begin":170,"end":181},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T5","span":{"begin":683,"end":691},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"mondo_id","subj":"T1","obj":"0009552"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"0009552"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"0019270"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"0021152"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"0005105"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-SeqVar
{"project":"LitCoin-SeqVar","denotations":[{"id":"T1","span":{"begin":1233,"end":1237},"obj":"SequenceVariant"},{"id":"T2","span":{"begin":1496,"end":1500},"obj":"SequenceVariant"},{"id":"T3","span":{"begin":1688,"end":1692},"obj":"SequenceVariant"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-GeneOrGeneProduct-v0
{"project":"LitCoin-GeneOrGeneProduct-v0","denotations":[{"id":"T1","span":{"begin":0,"end":6},"obj":"GeneOrGeneProduct"},{"id":"T2","span":{"begin":7,"end":15},"obj":"GeneOrGeneProduct"},{"id":"T3","span":{"begin":27,"end":31},"obj":"GeneOrGeneProduct"},{"id":"T4","span":{"begin":32,"end":42},"obj":"GeneOrGeneProduct"},{"id":"T5","span":{"begin":60,"end":63},"obj":"GeneOrGeneProduct"},{"id":"T6","span":{"begin":87,"end":90},"obj":"GeneOrGeneProduct"},{"id":"T7","span":{"begin":201,"end":209},"obj":"GeneOrGeneProduct"},{"id":"T8","span":{"begin":231,"end":238},"obj":"GeneOrGeneProduct"},{"id":"T9","span":{"begin":240,"end":258},"obj":"GeneOrGeneProduct"},{"id":"T10","span":{"begin":261,"end":306},"obj":"GeneOrGeneProduct"},{"id":"T11","span":{"begin":307,"end":322},"obj":"GeneOrGeneProduct"},{"id":"T12","span":{"begin":327,"end":334},"obj":"GeneOrGeneProduct"},{"id":"T13","span":{"begin":367,"end":399},"obj":"GeneOrGeneProduct"},{"id":"T14","span":{"begin":401,"end":406},"obj":"GeneOrGeneProduct"},{"id":"T15","span":{"begin":415,"end":424},"obj":"GeneOrGeneProduct"},{"id":"T16","span":{"begin":492,"end":497},"obj":"GeneOrGeneProduct"},{"id":"T17","span":{"begin":530,"end":540},"obj":"GeneOrGeneProduct"},{"id":"T18","span":{"begin":546,"end":550},"obj":"GeneOrGeneProduct"},{"id":"T19","span":{"begin":616,"end":622},"obj":"GeneOrGeneProduct"},{"id":"T20","span":{"begin":644,"end":659},"obj":"GeneOrGeneProduct"},{"id":"T21","span":{"begin":661,"end":669},"obj":"GeneOrGeneProduct"},{"id":"T22","span":{"begin":725,"end":729},"obj":"GeneOrGeneProduct"},{"id":"T23","span":{"begin":733,"end":742},"obj":"GeneOrGeneProduct"},{"id":"T24","span":{"begin":745,"end":749},"obj":"GeneOrGeneProduct"},{"id":"T25","span":{"begin":772,"end":783},"obj":"GeneOrGeneProduct"},{"id":"T26","span":{"begin":860,"end":866},"obj":"GeneOrGeneProduct"},{"id":"T27","span":{"begin":872,"end":880},"obj":"GeneOrGeneProduct"},{"id":"T28","span":{"begin":888,"end":892},"obj":"GeneOrGeneProduct"},{"id":"T29","span":{"begin":893,"end":903},"obj":"GeneOrGeneProduct"},{"id":"T30","span":{"begin":939,"end":943},"obj":"GeneOrGeneProduct"},{"id":"T31","span":{"begin":949,"end":956},"obj":"GeneOrGeneProduct"},{"id":"T32","span":{"begin":976,"end":980},"obj":"GeneOrGeneProduct"},{"id":"T33","span":{"begin":981,"end":991},"obj":"GeneOrGeneProduct"},{"id":"T34","span":{"begin":993,"end":1000},"obj":"GeneOrGeneProduct"},{"id":"T35","span":{"begin":1037,"end":1042},"obj":"GeneOrGeneProduct"},{"id":"T36","span":{"begin":1150,"end":1156},"obj":"GeneOrGeneProduct"},{"id":"T37","span":{"begin":1218,"end":1228},"obj":"GeneOrGeneProduct"},{"id":"T38","span":{"begin":1246,"end":1253},"obj":"GeneOrGeneProduct"},{"id":"T39","span":{"begin":1254,"end":1261},"obj":"GeneOrGeneProduct"},{"id":"T40","span":{"begin":1335,"end":1338},"obj":"GeneOrGeneProduct"},{"id":"T41","span":{"begin":1344,"end":1348},"obj":"GeneOrGeneProduct"},{"id":"T42","span":{"begin":1379,"end":1383},"obj":"GeneOrGeneProduct"},{"id":"T43","span":{"begin":1384,"end":1394},"obj":"GeneOrGeneProduct"},{"id":"T44","span":{"begin":1399,"end":1409},"obj":"GeneOrGeneProduct"},{"id":"T45","span":{"begin":1488,"end":1495},"obj":"GeneOrGeneProduct"},{"id":"T46","span":{"begin":1501,"end":1509},"obj":"GeneOrGeneProduct"},{"id":"T47","span":{"begin":1514,"end":1523},"obj":"GeneOrGeneProduct"},{"id":"T48","span":{"begin":1526,"end":1530},"obj":"GeneOrGeneProduct"},{"id":"T49","span":{"begin":1531,"end":1541},"obj":"GeneOrGeneProduct"},{"id":"T50","span":{"begin":1587,"end":1593},"obj":"GeneOrGeneProduct"},{"id":"T51","span":{"begin":1594,"end":1605},"obj":"GeneOrGeneProduct"},{"id":"T52","span":{"begin":1612,"end":1619},"obj":"GeneOrGeneProduct"},{"id":"T53","span":{"begin":1620,"end":1627},"obj":"GeneOrGeneProduct"},{"id":"T54","span":{"begin":1680,"end":1687},"obj":"GeneOrGeneProduct"},{"id":"T55","span":{"begin":1693,"end":1701},"obj":"GeneOrGeneProduct"},{"id":"T56","span":{"begin":1725,"end":1729},"obj":"GeneOrGeneProduct"},{"id":"T57","span":{"begin":1730,"end":1740},"obj":"GeneOrGeneProduct"},{"id":"T58","span":{"begin":1768,"end":1775},"obj":"GeneOrGeneProduct"},{"id":"T59","span":{"begin":1802,"end":1806},"obj":"GeneOrGeneProduct"},{"id":"T60","span":{"begin":1807,"end":1817},"obj":"GeneOrGeneProduct"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-GeneOrGeneProduct-v2
{"project":"LitCoin-GeneOrGeneProduct-v2","denotations":[{"id":"T1","span":{"begin":0,"end":6},"obj":"GeneOrGeneProduct"},{"id":"T2","span":{"begin":27,"end":31},"obj":"GeneOrGeneProduct"},{"id":"T3","span":{"begin":60,"end":63},"obj":"GeneOrGeneProduct"},{"id":"T4","span":{"begin":87,"end":90},"obj":"GeneOrGeneProduct"},{"id":"T5","span":{"begin":231,"end":238},"obj":"GeneOrGeneProduct"},{"id":"T6","span":{"begin":240,"end":258},"obj":"GeneOrGeneProduct"},{"id":"T7","span":{"begin":261,"end":306},"obj":"GeneOrGeneProduct"},{"id":"T8","span":{"begin":307,"end":322},"obj":"GeneOrGeneProduct"},{"id":"T9","span":{"begin":327,"end":334},"obj":"GeneOrGeneProduct"},{"id":"T10","span":{"begin":367,"end":399},"obj":"GeneOrGeneProduct"},{"id":"T11","span":{"begin":401,"end":406},"obj":"GeneOrGeneProduct"},{"id":"T12","span":{"begin":492,"end":497},"obj":"GeneOrGeneProduct"},{"id":"T13","span":{"begin":546,"end":550},"obj":"GeneOrGeneProduct"},{"id":"T14","span":{"begin":616,"end":622},"obj":"GeneOrGeneProduct"},{"id":"T15","span":{"begin":644,"end":659},"obj":"GeneOrGeneProduct"},{"id":"T16","span":{"begin":725,"end":729},"obj":"GeneOrGeneProduct"},{"id":"T17","span":{"begin":733,"end":742},"obj":"GeneOrGeneProduct"},{"id":"T18","span":{"begin":745,"end":749},"obj":"GeneOrGeneProduct"},{"id":"T19","span":{"begin":860,"end":866},"obj":"GeneOrGeneProduct"},{"id":"T20","span":{"begin":888,"end":892},"obj":"GeneOrGeneProduct"},{"id":"T21","span":{"begin":949,"end":956},"obj":"GeneOrGeneProduct"},{"id":"T22","span":{"begin":976,"end":980},"obj":"GeneOrGeneProduct"},{"id":"T23","span":{"begin":1150,"end":1156},"obj":"GeneOrGeneProduct"},{"id":"T24","span":{"begin":1218,"end":1228},"obj":"GeneOrGeneProduct"},{"id":"T25","span":{"begin":1246,"end":1253},"obj":"GeneOrGeneProduct"},{"id":"T26","span":{"begin":1254,"end":1261},"obj":"GeneOrGeneProduct"},{"id":"T27","span":{"begin":1344,"end":1348},"obj":"GeneOrGeneProduct"},{"id":"T28","span":{"begin":1379,"end":1383},"obj":"GeneOrGeneProduct"},{"id":"T29","span":{"begin":1488,"end":1495},"obj":"GeneOrGeneProduct"},{"id":"T30","span":{"begin":1514,"end":1523},"obj":"GeneOrGeneProduct"},{"id":"T31","span":{"begin":1526,"end":1530},"obj":"GeneOrGeneProduct"},{"id":"T32","span":{"begin":1612,"end":1619},"obj":"GeneOrGeneProduct"},{"id":"T33","span":{"begin":1620,"end":1627},"obj":"GeneOrGeneProduct"},{"id":"T34","span":{"begin":1680,"end":1687},"obj":"GeneOrGeneProduct"},{"id":"T35","span":{"begin":1725,"end":1729},"obj":"GeneOrGeneProduct"},{"id":"T36","span":{"begin":1768,"end":1775},"obj":"GeneOrGeneProduct"},{"id":"T37","span":{"begin":1802,"end":1806},"obj":"GeneOrGeneProduct"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-Disease-MeSH
{"project":"LitCoin-Disease-MeSH","denotations":[{"id":"T1","span":{"begin":60,"end":73},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T2","span":{"begin":87,"end":100},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T3","span":{"begin":102,"end":105},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T4","span":{"begin":683,"end":691},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T5","span":{"begin":696,"end":711},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T6","span":{"begin":931,"end":934},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T7","span":{"begin":1082,"end":1085},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T8","span":{"begin":1656,"end":1659},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"originalLabel","subj":"T1","obj":"D007645"},{"id":"A5","pred":"originalLabel","subj":"T5","obj":"D014777"},{"id":"A3","pred":"originalLabel","subj":"T3","obj":"D007645"},{"id":"A8","pred":"originalLabel","subj":"T8","obj":"D007645"},{"id":"A2","pred":"originalLabel","subj":"T2","obj":"D007645"},{"id":"A6","pred":"originalLabel","subj":"T6","obj":"D007645"},{"id":"A7","pred":"originalLabel","subj":"T7","obj":"D007645"},{"id":"A4","pred":"originalLabel","subj":"T4","obj":"D008545"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-GeneOrGeneProduct-v3
{"project":"LitCoin-GeneOrGeneProduct-v3","denotations":[{"id":"T1","span":{"begin":0,"end":6},"obj":"GeneOrGeneProduct"},{"id":"T2","span":{"begin":60,"end":63},"obj":"GeneOrGeneProduct"},{"id":"T3","span":{"begin":87,"end":90},"obj":"GeneOrGeneProduct"},{"id":"T4","span":{"begin":231,"end":238},"obj":"GeneOrGeneProduct"},{"id":"T5","span":{"begin":240,"end":258},"obj":"GeneOrGeneProduct"},{"id":"T6","span":{"begin":261,"end":306},"obj":"GeneOrGeneProduct"},{"id":"T7","span":{"begin":315,"end":324},"obj":"GeneOrGeneProduct"},{"id":"T8","span":{"begin":327,"end":334},"obj":"GeneOrGeneProduct"},{"id":"T9","span":{"begin":367,"end":399},"obj":"GeneOrGeneProduct"},{"id":"T10","span":{"begin":401,"end":406},"obj":"GeneOrGeneProduct"},{"id":"T11","span":{"begin":492,"end":497},"obj":"GeneOrGeneProduct"},{"id":"T12","span":{"begin":616,"end":622},"obj":"GeneOrGeneProduct"},{"id":"T13","span":{"begin":644,"end":659},"obj":"GeneOrGeneProduct"},{"id":"T14","span":{"begin":860,"end":866},"obj":"GeneOrGeneProduct"},{"id":"T15","span":{"begin":949,"end":956},"obj":"GeneOrGeneProduct"},{"id":"T16","span":{"begin":1150,"end":1156},"obj":"GeneOrGeneProduct"},{"id":"T17","span":{"begin":1246,"end":1253},"obj":"GeneOrGeneProduct"},{"id":"T18","span":{"begin":1344,"end":1348},"obj":"GeneOrGeneProduct"},{"id":"T19","span":{"begin":1488,"end":1495},"obj":"GeneOrGeneProduct"},{"id":"T20","span":{"begin":1612,"end":1619},"obj":"GeneOrGeneProduct"},{"id":"T21","span":{"begin":1680,"end":1687},"obj":"GeneOrGeneProduct"},{"id":"T22","span":{"begin":1768,"end":1775},"obj":"GeneOrGeneProduct"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin_Mondo_095
{"project":"LitCoin_Mondo_095","denotations":[{"id":"T1","span":{"begin":60,"end":73},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T2","span":{"begin":87,"end":100},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T3","span":{"begin":102,"end":105},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T4","span":{"begin":123,"end":141},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T5","span":{"begin":644,"end":647},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T6","span":{"begin":683,"end":691},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T7","span":{"begin":696,"end":711},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T8","span":{"begin":931,"end":934},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T9","span":{"begin":1082,"end":1085},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T10","span":{"begin":1656,"end":1659},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A6","pred":"mondo_id","subj":"T6","obj":"0005105"},{"id":"A7","pred":"mondo_id","subj":"T7","obj":"0005108"},{"id":"A8","pred":"mondo_id","subj":"T8","obj":"0009552"},{"id":"A3","pred":"mondo_id","subj":"T3","obj":"0009552"},{"id":"A2","pred":"mondo_id","subj":"T2","obj":"0009552"},{"id":"A1","pred":"mondo_id","subj":"T1","obj":"0009552"},{"id":"A9","pred":"mondo_id","subj":"T9","obj":"0009552"},{"id":"A4","pred":"mondo_id","subj":"T4","obj":"0019270"},{"id":"A5","pred":"mondo_id","subj":"T5","obj":"0014648"},{"id":"A10","pred":"mondo_id","subj":"T10","obj":"0009552"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-MeSH-Disease-2
{"project":"LitCoin-MeSH-Disease-2","denotations":[{"id":"T1","span":{"begin":60,"end":73},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T2","span":{"begin":87,"end":100},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T3","span":{"begin":102,"end":105},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T4","span":{"begin":110,"end":141},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T5","span":{"begin":683,"end":691},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T6","span":{"begin":696,"end":711},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T7","span":{"begin":931,"end":934},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T8","span":{"begin":1082,"end":1085},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T9","span":{"begin":1656,"end":1659},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A4","pred":"ID:","subj":"T4","obj":"DISEASE"},{"id":"A6","pred":"ID:","subj":"T6","obj":"D014777"},{"id":"A2","pred":"ID:","subj":"T2","obj":"D007645"},{"id":"A8","pred":"ID:","subj":"T8","obj":"D007645"},{"id":"A1","pred":"ID:","subj":"T1","obj":"D007645"},{"id":"A5","pred":"ID:","subj":"T5","obj":"D008545"},{"id":"A7","pred":"ID:","subj":"T7","obj":"D007645"},{"id":"A3","pred":"ID:","subj":"T3","obj":"D007645"},{"id":"A9","pred":"ID:","subj":"T9","obj":"D007645"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-MONDO_bioort2019
{"project":"LitCoin-MONDO_bioort2019","denotations":[{"id":"T1","span":{"begin":60,"end":73},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T2","span":{"begin":87,"end":100},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T3","span":{"begin":102,"end":105},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T4","span":{"begin":110,"end":141},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T5","span":{"begin":683,"end":691},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T6","span":{"begin":696,"end":711},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T7","span":{"begin":931,"end":934},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T8","span":{"begin":1082,"end":1085},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T9","span":{"begin":1656,"end":1659},"obj":"DiseaseOrPhenotypicFeature"}],"attributes":[{"id":"A1","pred":"#label","subj":"T1","obj":"D007645"},{"id":"A8","pred":"#label","subj":"T8","obj":"D007645"},{"id":"A9","pred":"#label","subj":"T9","obj":"D007645"},{"id":"A4","pred":"#label","subj":"T4","obj":"DISEASE"},{"id":"A5","pred":"#label","subj":"T5","obj":"D008545"},{"id":"A7","pred":"#label","subj":"T7","obj":"D007645"},{"id":"A3","pred":"#label","subj":"T3","obj":"D007645"},{"id":"A6","pred":"#label","subj":"T6","obj":"D014777"},{"id":"A2","pred":"#label","subj":"T2","obj":"D007645"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-NCBITaxon-2
{"project":"LitCoin-NCBITaxon-2","denotations":[{"id":"T1","span":{"begin":461,"end":467},"obj":"OrganismTaxon"},{"id":"T2","span":{"begin":587,"end":595},"obj":"OrganismTaxon"},{"id":"T3","span":{"begin":1002,"end":1007},"obj":"OrganismTaxon"},{"id":"T4","span":{"begin":1606,"end":1611},"obj":"OrganismTaxon"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-Chemical-MeSH-CHEBI
{"project":"LitCoin-Chemical-MeSH-CHEBI","denotations":[{"id":"T1","span":{"begin":60,"end":63},"obj":"ChemicalEntity"},{"id":"T2","span":{"begin":377,"end":390},"obj":"ChemicalEntity"},{"id":"T4","span":{"begin":1182,"end":1189},"obj":"ChemicalEntity"},{"id":"T7","span":{"begin":1193,"end":1201},"obj":"ChemicalEntity"},{"id":"T10","span":{"begin":1606,"end":1627},"obj":"ChemicalEntity"}],"attributes":[{"id":"A1","pred":"ID:","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_15595"},{"id":"A2","pred":"ID:","subj":"T2","obj":"D000109"},{"id":"A3","pred":"ID:","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_15355"},{"id":"A4","pred":"ID:","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_57305"},{"id":"A5","pred":"ID:","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_29947"},{"id":"A6","pred":"ID:","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_15428"},{"id":"A7","pred":"ID:","subj":"T7","obj":"http://purl.obolibrary.org/obo/CHEBI_32696"},{"id":"A8","pred":"ID:","subj":"T7","obj":"http://purl.obolibrary.org/obo/CHEBI_29016"},{"id":"A9","pred":"ID:","subj":"T7","obj":"http://purl.obolibrary.org/obo/CHEBI_16467"},{"id":"A10","pred":"ID:","subj":"T10","obj":"C048963"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
LitCoin-training-merged
{"project":"LitCoin-training-merged","denotations":[{"id":"T10","span":{"begin":1606,"end":1627},"obj":"ChemicalEntity"},{"id":"T7","span":{"begin":1193,"end":1201},"obj":"ChemicalEntity"},{"id":"T4","span":{"begin":1182,"end":1189},"obj":"ChemicalEntity"},{"id":"T2","span":{"begin":377,"end":390},"obj":"ChemicalEntity"},{"id":"T1","span":{"begin":60,"end":63},"obj":"ChemicalEntity"},{"id":"T22","span":{"begin":1768,"end":1775},"obj":"GeneOrGeneProduct"},{"id":"T21","span":{"begin":1680,"end":1687},"obj":"GeneOrGeneProduct"},{"id":"T20","span":{"begin":1612,"end":1619},"obj":"GeneOrGeneProduct"},{"id":"T19","span":{"begin":1488,"end":1495},"obj":"GeneOrGeneProduct"},{"id":"T18","span":{"begin":1344,"end":1348},"obj":"GeneOrGeneProduct"},{"id":"T17","span":{"begin":1246,"end":1253},"obj":"GeneOrGeneProduct"},{"id":"T16","span":{"begin":1150,"end":1156},"obj":"GeneOrGeneProduct"},{"id":"T15","span":{"begin":949,"end":956},"obj":"GeneOrGeneProduct"},{"id":"T14","span":{"begin":860,"end":866},"obj":"GeneOrGeneProduct"},{"id":"T13","span":{"begin":644,"end":659},"obj":"GeneOrGeneProduct"},{"id":"T12","span":{"begin":616,"end":622},"obj":"GeneOrGeneProduct"},{"id":"T11","span":{"begin":492,"end":497},"obj":"GeneOrGeneProduct"},{"id":"T95788","span":{"begin":401,"end":406},"obj":"GeneOrGeneProduct"},{"id":"T9","span":{"begin":367,"end":399},"obj":"GeneOrGeneProduct"},{"id":"T8","span":{"begin":327,"end":334},"obj":"GeneOrGeneProduct"},{"id":"T34883","span":{"begin":315,"end":324},"obj":"GeneOrGeneProduct"},{"id":"T6","span":{"begin":261,"end":306},"obj":"GeneOrGeneProduct"},{"id":"T5","span":{"begin":240,"end":258},"obj":"GeneOrGeneProduct"},{"id":"T14785","span":{"begin":231,"end":238},"obj":"GeneOrGeneProduct"},{"id":"T3","span":{"begin":87,"end":90},"obj":"GeneOrGeneProduct"},{"id":"T72236","span":{"begin":60,"end":63},"obj":"GeneOrGeneProduct"},{"id":"T76591","span":{"begin":0,"end":6},"obj":"GeneOrGeneProduct"},{"id":"T39460","span":{"begin":1656,"end":1659},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T94657","span":{"begin":1082,"end":1085},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T60401","span":{"begin":931,"end":934},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T87085","span":{"begin":696,"end":711},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T28887","span":{"begin":683,"end":691},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T15789","span":{"begin":110,"end":141},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T83571","span":{"begin":102,"end":105},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T36030","span":{"begin":87,"end":100},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T36666","span":{"begin":60,"end":73},"obj":"DiseaseOrPhenotypicFeature"},{"id":"T80832","span":{"begin":1606,"end":1611},"obj":"OrganismTaxon"},{"id":"T77345","span":{"begin":1002,"end":1007},"obj":"OrganismTaxon"},{"id":"T81846","span":{"begin":587,"end":595},"obj":"OrganismTaxon"},{"id":"T47895","span":{"begin":461,"end":467},"obj":"OrganismTaxon"},{"id":"T64288","span":{"begin":1688,"end":1692},"obj":"SequenceVariant"},{"id":"T66181","span":{"begin":1496,"end":1500},"obj":"SequenceVariant"},{"id":"T1064","span":{"begin":1233,"end":1237},"obj":"SequenceVariant"}],"attributes":[{"id":"A3","pred":"ID:","subj":"T2","obj":"http://purl.obolibrary.org/obo/CHEBI_15355"},{"id":"A2","pred":"ID:","subj":"T2","obj":"D000109"},{"id":"A76013","pred":"#label","subj":"T36666","obj":"D007645"},{"id":"A3080","pred":"#label","subj":"T87085","obj":"D014777"},{"id":"A19699","pred":"#label","subj":"T28887","obj":"D008545"},{"id":"A10","pred":"ID:","subj":"T10","obj":"C048963"},{"id":"A23355","pred":"#label","subj":"T36030","obj":"D007645"},{"id":"A75911","pred":"#label","subj":"T94657","obj":"D007645"},{"id":"A9","pred":"ID:","subj":"T7","obj":"http://purl.obolibrary.org/obo/CHEBI_16467"},{"id":"A8","pred":"ID:","subj":"T7","obj":"http://purl.obolibrary.org/obo/CHEBI_29016"},{"id":"A7","pred":"ID:","subj":"T7","obj":"http://purl.obolibrary.org/obo/CHEBI_32696"},{"id":"A45419","pred":"#label","subj":"T39460","obj":"D007645"},{"id":"A88988","pred":"#label","subj":"T83571","obj":"D007645"},{"id":"A6","pred":"ID:","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_15428"},{"id":"A5","pred":"ID:","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_29947"},{"id":"A4","pred":"ID:","subj":"T4","obj":"http://purl.obolibrary.org/obo/CHEBI_57305"},{"id":"A1","pred":"ID:","subj":"T1","obj":"http://purl.obolibrary.org/obo/CHEBI_15595"},{"id":"A6695","pred":"#label","subj":"T60401","obj":"D007645"},{"id":"A88977","pred":"#label","subj":"T15789","obj":"DISEASE"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
DisGeNET
{"project":"DisGeNET","denotations":[{"id":"T0","span":{"begin":616,"end":622},"obj":"gene:57152"},{"id":"T1","span":{"begin":683,"end":691},"obj":"disease:C0025202"},{"id":"T2","span":{"begin":616,"end":622},"obj":"gene:57152"},{"id":"T3","span":{"begin":696,"end":711},"obj":"disease:C0042769"},{"id":"T4","span":{"begin":644,"end":659},"obj":"gene:57152"},{"id":"T5","span":{"begin":683,"end":691},"obj":"disease:C0025202"},{"id":"T6","span":{"begin":644,"end":659},"obj":"gene:57152"},{"id":"T7","span":{"begin":696,"end":711},"obj":"disease:C0042769"}],"relations":[{"id":"R1","pred":"associated_with","subj":"T0","obj":"T1"},{"id":"R2","pred":"associated_with","subj":"T2","obj":"T3"},{"id":"R3","pred":"associated_with","subj":"T4","obj":"T5"},{"id":"R4","pred":"associated_with","subj":"T6","obj":"T7"}],"namespaces":[{"prefix":"gene","uri":"http://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"disease","uri":"http://purl.bioontology.org/ontology/MEDLINEPLUS/"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
PubmedHPO
{"project":"PubmedHPO","denotations":[{"id":"T1","span":{"begin":150,"end":181},"obj":"HP_0000007"},{"id":"T2","span":{"begin":150,"end":169},"obj":"HP_0000007"},{"id":"T3","span":{"begin":683,"end":691},"obj":"HP_0002861"},{"id":"T4","span":{"begin":733,"end":749},"obj":"HP_0002843"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
Allie
{"project":"Allie","denotations":[{"id":"SS1_20854438_2_0","span":{"begin":87,"end":100},"obj":"expanded"},{"id":"SS2_20854438_2_0","span":{"begin":102,"end":105},"obj":"abbr"},{"id":"SS1_20854438_3_0","span":{"begin":367,"end":399},"obj":"expanded"},{"id":"SS2_20854438_3_0","span":{"begin":401,"end":406},"obj":"abbr"},{"id":"SS1_20854438_10_0","span":{"begin":1008,"end":1042},"obj":"expanded"},{"id":"SS2_20854438_10_0","span":{"begin":1044,"end":1049},"obj":"abbr"},{"id":"SS1_20854438_10_1","span":{"begin":1182,"end":1231},"obj":"expanded"},{"id":"SS2_20854438_10_1","span":{"begin":1233,"end":1237},"obj":"abbr"}],"relations":[{"id":"AE1_20854438_2_0","pred":"abbreviatedTo","subj":"SS1_20854438_2_0","obj":"SS2_20854438_2_0"},{"id":"AE1_20854438_3_0","pred":"abbreviatedTo","subj":"SS1_20854438_3_0","obj":"SS2_20854438_3_0"},{"id":"AE1_20854438_10_0","pred":"abbreviatedTo","subj":"SS1_20854438_10_0","obj":"SS2_20854438_10_0"},{"id":"AE1_20854438_10_1","pred":"abbreviatedTo","subj":"SS1_20854438_10_1","obj":"SS2_20854438_10_1"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
DisGeNET5_variant_disease
{"project":"DisGeNET5_variant_disease","denotations":[{"id":"20854438-11#46#50#geners28937888","span":{"begin":1688,"end":1692},"obj":"geners28937888"},{"id":"20854438-11#46#50#geners112121360","span":{"begin":1688,"end":1692},"obj":"geners112121360"},{"id":"20854438-11#46#50#geners200751829","span":{"begin":1688,"end":1692},"obj":"geners200751829"},{"id":"20854438-11#14#17#diseaseC0025221","span":{"begin":1656,"end":1659},"obj":"diseaseC0025221"}],"relations":[{"id":"46#50#geners2893788814#17#diseaseC0025221","pred":"associated_with","subj":"20854438-11#46#50#geners28937888","obj":"20854438-11#14#17#diseaseC0025221"},{"id":"46#50#geners11212136014#17#diseaseC0025221","pred":"associated_with","subj":"20854438-11#46#50#geners112121360","obj":"20854438-11#14#17#diseaseC0025221"},{"id":"46#50#geners20075182914#17#diseaseC0025221","pred":"associated_with","subj":"20854438-11#46#50#geners200751829","obj":"20854438-11#14#17#diseaseC0025221"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
DisGeNET5_gene_disease
{"project":"DisGeNET5_gene_disease","denotations":[{"id":"20854438-0#0#6#gene57152","span":{"begin":327,"end":334},"obj":"gene57152"},{"id":"20854438-0#60#73#diseaseC0025221","span":{"begin":1004,"end":1071},"obj":"diseaseC0025221"},{"id":"20854438-1#153#171#gene3111","span":{"begin":240,"end":258},"obj":"gene3111"},{"id":"20854438-1#174#210#gene5328","span":{"begin":261,"end":297},"obj":"gene5328"},{"id":"20854438-1#0#13#diseaseC0025221","span":{"begin":87,"end":100},"obj":"diseaseC0025221"},{"id":"20854438-1#15#18#diseaseC0025221","span":{"begin":102,"end":105},"obj":"diseaseC0025221"},{"id":"20854438-1#0#13#diseaseC0025221","span":{"begin":87,"end":100},"obj":"diseaseC0025221"},{"id":"20854438-1#15#18#diseaseC0025221","span":{"begin":102,"end":105},"obj":"diseaseC0025221"},{"id":"20854438-4#55#61#gene57152","span":{"begin":616,"end":622},"obj":"gene57152"},{"id":"20854438-4#83#98#gene57152","span":{"begin":644,"end":659},"obj":"gene57152"},{"id":"20854438-4#122#130#diseaseC0025202","span":{"begin":683,"end":691},"obj":"diseaseC0025202"},{"id":"20854438-4#135#150#diseaseC0042769","span":{"begin":696,"end":711},"obj":"diseaseC0042769"},{"id":"20854438-4#122#130#diseaseC0025202","span":{"begin":683,"end":691},"obj":"diseaseC0025202"},{"id":"20854438-4#135#150#diseaseC0042769","span":{"begin":696,"end":711},"obj":"diseaseC0042769"}],"relations":[{"id":"0#6#gene5715260#73#diseaseC0025221","pred":"associated_with","subj":"20854438-0#0#6#gene57152","obj":"20854438-0#60#73#diseaseC0025221"},{"id":"153#171#gene31110#13#diseaseC0025221","pred":"associated_with","subj":"20854438-1#153#171#gene3111","obj":"20854438-1#0#13#diseaseC0025221"},{"id":"153#171#gene311115#18#diseaseC0025221","pred":"associated_with","subj":"20854438-1#153#171#gene3111","obj":"20854438-1#15#18#diseaseC0025221"},{"id":"153#171#gene31110#13#diseaseC0025221","pred":"associated_with","subj":"20854438-1#153#171#gene3111","obj":"20854438-1#0#13#diseaseC0025221"},{"id":"153#171#gene311115#18#diseaseC0025221","pred":"associated_with","subj":"20854438-1#153#171#gene3111","obj":"20854438-1#15#18#diseaseC0025221"},{"id":"174#210#gene53280#13#diseaseC0025221","pred":"associated_with","subj":"20854438-1#174#210#gene5328","obj":"20854438-1#0#13#diseaseC0025221"},{"id":"174#210#gene532815#18#diseaseC0025221","pred":"associated_with","subj":"20854438-1#174#210#gene5328","obj":"20854438-1#15#18#diseaseC0025221"},{"id":"174#210#gene53280#13#diseaseC0025221","pred":"associated_with","subj":"20854438-1#174#210#gene5328","obj":"20854438-1#0#13#diseaseC0025221"},{"id":"174#210#gene532815#18#diseaseC0025221","pred":"associated_with","subj":"20854438-1#174#210#gene5328","obj":"20854438-1#15#18#diseaseC0025221"},{"id":"55#61#gene57152122#130#diseaseC0025202","pred":"associated_with","subj":"20854438-4#55#61#gene57152","obj":"20854438-4#122#130#diseaseC0025202"},{"id":"55#61#gene57152135#150#diseaseC0042769","pred":"associated_with","subj":"20854438-4#55#61#gene57152","obj":"20854438-4#135#150#diseaseC0042769"},{"id":"55#61#gene57152122#130#diseaseC0025202","pred":"associated_with","subj":"20854438-4#55#61#gene57152","obj":"20854438-4#122#130#diseaseC0025202"},{"id":"55#61#gene57152135#150#diseaseC0042769","pred":"associated_with","subj":"20854438-4#55#61#gene57152","obj":"20854438-4#135#150#diseaseC0042769"},{"id":"83#98#gene57152122#130#diseaseC0025202","pred":"associated_with","subj":"20854438-4#83#98#gene57152","obj":"20854438-4#122#130#diseaseC0025202"},{"id":"83#98#gene57152135#150#diseaseC0042769","pred":"associated_with","subj":"20854438-4#83#98#gene57152","obj":"20854438-4#135#150#diseaseC0042769"},{"id":"83#98#gene57152122#130#diseaseC0025202","pred":"associated_with","subj":"20854438-4#83#98#gene57152","obj":"20854438-4#122#130#diseaseC0025202"},{"id":"83#98#gene57152135#150#diseaseC0042769","pred":"associated_with","subj":"20854438-4#83#98#gene57152","obj":"20854438-4#135#150#diseaseC0042769"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}
tmVarCorpus
{"project":"tmVarCorpus","denotations":[{"id":"T1","span":{"begin":1233,"end":1237},"obj":"ProteinMutation:p|SUB|G|86|R"},{"id":"T2","span":{"begin":1496,"end":1500},"obj":"ProteinMutation:p|SUB|G|86|R"},{"id":"T3","span":{"begin":1688,"end":1692},"obj":"ProteinMutation:p|SUB|G|86|R"}],"text":"SLURP1 mutation-impaired T-cell activation in a family with mal de Meleda.\nBACKGROUND: Mal de Meleda (MDM) is palmoplantar erythrokeratoderma with an autosomal recessive inheritance and is caused by a mutation in the gene encoding SLURP-1 (lymphocyte antigen 6/urokinase-type plasminogen activator receptor related protein-1). SLURP-1 is an allosteric agonist to the nicotinic acetylcholine receptor (nAchR) and it regulates epidermal homeostasis. In addition, murine studies have shown that nAchR signalling is important for the regulation of T-cell function. Among the family members, patients with the homozygous SLURP1 (previously known as ARS component B) mutation are prone to melanoma and viral infection, which might link to defective T-cell function as well as a derangement of epidermal homeostasis.\nOBJECTIVES: To investigate the association of the SLURP1 gene mutation with T-cell activation in a Taiwanese family with MDM. To test that SLURP-1 is essential for T-cell activation.\nMETHODS: Human peripheral blood mononuclear cells (PBMCs) were isolated from a Taiwanese MDM family bearing the G to A substitution in nucleotide 256 in the SLURP1 gene, corresponding to a glycine to arginine substitution at amino acid 86 (G86R) in the SLURP-1 protein. PBMCs from homozygotes and wild-type controls were stimulated with anti-CD3/anti-CD28 antibodies and the level of T-cell activation was determined by the stimulation index.\nRESULTS: PBMCs with the heterozygous and homozygous SLURP-1 G86R mutation had defective T-cell activation. This was restored by the addition of 0·5 μg mL(-1) recombinant human SLURP-1 protein.\nCONCLUSIONS: Patients with MDM with the homozygous SLURP-1 G86R mutation may have an impaired T-cell activation. The presence of wild-type SLURP-1 is essential for normal T-cell activation."}