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PubMed:20843785 JSONTXT

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CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 690-701 Cell denotes fungal cell http://purl.obolibrary.org/obo/CL:0000521

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 144-152 HP_0001050 denotes plethora

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 318-330 FMAID:197276 denotes carbohydrate
_T2 318-330 FMAID:82737 denotes carbohydrate
_T3 541-546 FMAID:198663 denotes genes
_T4 761-766 FMAID:198663 denotes genes
_T5 823-843 FMAID:86454 denotes cell wall components
_T6 823-843 FMAID:200882 denotes cell wall components
_T7 953-957 FMAID:198663 denotes gene
_T8 987-994 FMAID:67257 denotes protein
_T9 987-994 FMAID:165447 denotes protein
_T10 1005-1012 FMAID:179365 denotes network
_T11 1356-1363 FMAID:84116 denotes Genomic
_T12 1356-1363 FMAID:198062 denotes Genomic
_T13 1389-1394 FMAID:198663 denotes genes
_T14 1435-1443 FMAID:165447 denotes proteins
_T15 1435-1443 FMAID:67257 denotes proteins
_T16 1453-1459 FMAID:117624 denotes solely
_T17 1568-1573 FMAID:198663 denotes genes
_T18 1663-1671 FMAID:67257 denotes proteins
_T19 1663-1671 FMAID:165447 denotes proteins

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 612-616 http://www.uniprot.org/uniprot/Q9D1C3 denotes prey

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 12-22 http://purl.bioontology.org/ontology/NCBITAXON/167159 denotes subgroup C
T2 107-118 http://purl.bioontology.org/ontology/NCBITAXON/441504 denotes Trichoderma
T3 107-118 http://purl.bioontology.org/ontology/NCBITAXON/203763 denotes Trichoderma
T4 107-118 http://purl.bioontology.org/ontology/NCBITAXON/5543 denotes Trichoderma
T5 107-129 http://purl.bioontology.org/ontology/NCBITAXON/5547 denotes Trichoderma atroviride
T6 107-129 http://purl.bioontology.org/ontology/NCBITAXON/64502 denotes Trichoderma atroviride
T7 217-232 http://purl.bioontology.org/ontology/NCBITAXON/167159 denotes subgroups (A, B
T8 241-251 http://purl.bioontology.org/ontology/NCBITAXON/167159 denotes Subgroup C
T9 462-473 http://purl.bioontology.org/ontology/NCBITAXON/203763 denotes Trichoderma
T10 462-473 http://purl.bioontology.org/ontology/NCBITAXON/5543 denotes Trichoderma
T11 462-473 http://purl.bioontology.org/ontology/NCBITAXON/441504 denotes Trichoderma
T12 462-484 http://purl.bioontology.org/ontology/NCBITAXON/64502 denotes Trichoderma atroviride
T13 462-484 http://purl.bioontology.org/ontology/NCBITAXON/5547 denotes Trichoderma atroviride
T14 462-507 http://purl.bioontology.org/ontology/NCBITAXON/1383389 denotes Trichoderma atroviride and Trichoderma virens
T15 489-500 http://purl.bioontology.org/ontology/NCBITAXON/203763 denotes Trichoderma
T16 489-500 http://purl.bioontology.org/ontology/NCBITAXON/5543 denotes Trichoderma
T17 489-500 http://purl.bioontology.org/ontology/NCBITAXON/441504 denotes Trichoderma
T18 489-507 http://purl.bioontology.org/ontology/NCBITAXON/398679 denotes Trichoderma virens
T19 489-507 http://purl.bioontology.org/ontology/NCBITAXON/304637 denotes Trichoderma virens
T20 489-507 http://purl.bioontology.org/ontology/NCBITAXON/5547 denotes Trichoderma virens
T21 489-507 http://purl.bioontology.org/ontology/NCBITAXON/29875 denotes Trichoderma virens
T22 617-633 http://purl.bioontology.org/ontology/NCBITAXON/1005963 denotes Botrytis cinerea
T23 643-654 http://purl.bioontology.org/ontology/NCBITAXON/5573 denotes Rhizoctonia
T24 643-661 http://purl.bioontology.org/ontology/NCBITAXON/456999 denotes Rhizoctonia solani
T25 809-812 http://purl.bioontology.org/ontology/NCBITAXON/604139 denotes non

GO-BP

Id Subject Object Predicate Lexical cue
T1 882-897 http://purl.obolibrary.org/obo/GO_0006351 denotes transcriptional
T2 1013-1022 http://purl.obolibrary.org/obo/GO_0009058 denotes formation
T3 1326-1346 http://purl.obolibrary.org/obo/GO_0003824 denotes catalytically active
T4 1340-1354 http://purl.obolibrary.org/obo/GO_0003824 denotes active enzymes

GO-MF

Id Subject Object Predicate Lexical cue
T1 55-69 http://purl.obolibrary.org/obo/GO_0008061 denotes chitin-binding
T2 62-69 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T3 331-338 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T4 1287-1294 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T5 62-69 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T6 331-338 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T7 1287-1294 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T8 62-69 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T9 331-338 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T10 1287-1294 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T11 62-69 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T12 331-338 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T13 1287-1294 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T14 318-338 http://purl.obolibrary.org/obo/GO_0030246 denotes carbohydrate-binding

GO-CC

Id Subject Object Predicate Lexical cue
T1 697-701 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2 823-827 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3 697-707 http://purl.obolibrary.org/obo/GO_0005618 denotes cell walls
T4 823-832 http://purl.obolibrary.org/obo/GO_0005618 denotes cell wall

Allie

Id Subject Object Predicate Lexical cue
SS1_20843785_2_0 241-251 expanded denotes Subgroup C
SS2_20843785_2_0 253-256 abbr denotes sgC
AE1_20843785_2_0 SS1_20843785_2_0 SS2_20843785_2_0 abbreviatedTo Subgroup C,sgC

EDAM-topics

Id Subject Object Predicate Lexical cue
T1 131-136 http://edamontology.org/topic_0782 denotes Fungi
T2 181-197 http://edamontology.org/topic_3293 denotes phylogenetically
T3 318-330 http://edamontology.org/topic_0152 denotes carbohydrate
T4 407-412 http://edamontology.org/topic_3678 denotes study
T5 882-897 http://edamontology.org/topic_0110 denotes transcriptional
T6 882-897 http://edamontology.org/topic_3308 denotes transcriptional
T7 882-897 http://edamontology.org/topic_0203 denotes transcriptional
T8 882-897 http://edamontology.org/topic_3512 denotes transcriptional
T9 987-994 http://edamontology.org/topic_0078 denotes protein
T10 1005-1012 http://edamontology.org/topic_0602 denotes network
T11 1142-1150 http://edamontology.org/topic_3168 denotes sequence
T12 1142-1150 http://edamontology.org/topic_0080 denotes sequence
T13 1142-1159 http://edamontology.org/topic_0080 denotes sequence analysis
T14 1313-1321 http://edamontology.org/topic_2269 denotes probably
T15 1356-1363 http://edamontology.org/topic_0622 denotes Genomic
T16 1435-1443 http://edamontology.org/topic_0078 denotes proteins
T17 1580-1585 http://edamontology.org/topic_3678 denotes study
T18 1663-1671 http://edamontology.org/topic_0078 denotes proteins

EDAM-DFO

Id Subject Object Predicate Lexical cue
T1 0-8 http://edamontology.org/operation_2945 denotes Analysis
T2 987-994 http://edamontology.org/format_1208 denotes protein
T3 987-994 http://edamontology.org/data_1467 denotes protein
T4 1005-1012 http://edamontology.org/data_2600 denotes network
T5 1013-1022 http://edamontology.org/operation_0335 denotes formation
T6 1013-1022 http://edamontology.org/format_1915 denotes formation
T7 1068-1077 http://edamontology.org/operation_0004 denotes functions
T8 1142-1150 http://edamontology.org/data_2044 denotes sequence
T9 1142-1150 http://edamontology.org/operation_3218 denotes sequence
T10 1142-1159 http://edamontology.org/operation_2404 denotes sequence analysis
T11 1142-1159 http://edamontology.org/operation_2403 denotes sequence analysis
T12 1142-1159 http://edamontology.org/operation_2408 denotes sequence analysis
T13 1142-1159 http://edamontology.org/operation_0258 denotes sequence analysis
T14 1142-1159 http://edamontology.org/operation_3229 denotes sequence analysis
T15 1142-1159 http://edamontology.org/operation_3197 denotes sequence analysis
T16 1151-1159 http://edamontology.org/operation_2945 denotes analysis
T17 1364-1372 http://edamontology.org/operation_2945 denotes analysis
T18 1435-1443 http://edamontology.org/data_1467 denotes proteins
T19 1435-1443 http://edamontology.org/format_1208 denotes proteins
T20 1663-1671 http://edamontology.org/format_1208 denotes proteins
T21 1663-1671 http://edamontology.org/data_1467 denotes proteins

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-130 Sentence denotes Analysis of subgroup C of fungal chitinases containing chitin-binding and LysM modules in the mycoparasite Trichoderma atroviride.
TextSentencer_T2 131-240 Sentence denotes Fungi have a plethora of chitinases, which can be phylogenetically divided into three subgroups (A, B and C).
TextSentencer_T3 241-398 Sentence denotes Subgroup C (sgC) chitinases are especially interesting due to their multiple carbohydrate-binding modules, but they have not been investigated in detail yet.
TextSentencer_T4 399-508 Sentence denotes In this study, we analyzed sgC chitinases in the mycoparasites Trichoderma atroviride and Trichoderma virens.
TextSentencer_T5 509-722 Sentence denotes The expression of sgC chitinase genes in T. atroviride was induced during mycoparasitism of the fungal prey Botrytis cinerea, but not Rhizoctonia solani and correspondingly only by fungal cell walls of the former.
TextSentencer_T6 723-864 Sentence denotes Interestingly, only few sgC chitinase genes were inducible by chitin, suggesting that non-chitinous cell wall components can act as inducers.
TextSentencer_T7 865-1023 Sentence denotes In contrast, the transcriptional profile of the most abundantly expressed sgC chitinase gene tac6 indicated a role of the protein in hyphal network formation.
TextSentencer_T8 1024-1132 Sentence denotes This shows that sgC chitinases have diverse functions and are not only involved in the mycoparasitic attack.
TextSentencer_T9 1133-1355 Sentence denotes However, sequence analysis and 3D modelling revealed that TAC6 and also its ortholog in T. virens have potentially detrimental deletions in the substrate-binding site and are thus probably not catalytically active enzymes.
TextSentencer_T10 1356-1574 Sentence denotes Genomic analysis showed that the genes neighboring sgC chitinases often encode proteins that are solely composed of multiple LysM modules, which were induced by similar stimuli as their neighboring sgC chitinase genes.
TextSentencer_T11 1575-1672 Sentence denotes This study provides first insights into fungal sgC chitinases and their associated LysM proteins.
T1 0-130 Sentence denotes Analysis of subgroup C of fungal chitinases containing chitin-binding and LysM modules in the mycoparasite Trichoderma atroviride.
T2 131-240 Sentence denotes Fungi have a plethora of chitinases, which can be phylogenetically divided into three subgroups (A, B and C).
T3 241-398 Sentence denotes Subgroup C (sgC) chitinases are especially interesting due to their multiple carbohydrate-binding modules, but they have not been investigated in detail yet.
T4 399-508 Sentence denotes In this study, we analyzed sgC chitinases in the mycoparasites Trichoderma atroviride and Trichoderma virens.
T5 509-722 Sentence denotes The expression of sgC chitinase genes in T. atroviride was induced during mycoparasitism of the fungal prey Botrytis cinerea, but not Rhizoctonia solani and correspondingly only by fungal cell walls of the former.
T6 723-864 Sentence denotes Interestingly, only few sgC chitinase genes were inducible by chitin, suggesting that non-chitinous cell wall components can act as inducers.
T7 865-1023 Sentence denotes In contrast, the transcriptional profile of the most abundantly expressed sgC chitinase gene tac6 indicated a role of the protein in hyphal network formation.
T8 1024-1132 Sentence denotes This shows that sgC chitinases have diverse functions and are not only involved in the mycoparasitic attack.
T9 1133-1355 Sentence denotes However, sequence analysis and 3D modelling revealed that TAC6 and also its ortholog in T. virens have potentially detrimental deletions in the substrate-binding site and are thus probably not catalytically active enzymes.
T10 1356-1574 Sentence denotes Genomic analysis showed that the genes neighboring sgC chitinases often encode proteins that are solely composed of multiple LysM modules, which were induced by similar stimuli as their neighboring sgC chitinase genes.
T11 1575-1672 Sentence denotes This study provides first insights into fungal sgC chitinases and their associated LysM proteins.
T1 0-130 Sentence denotes Analysis of subgroup C of fungal chitinases containing chitin-binding and LysM modules in the mycoparasite Trichoderma atroviride.
T2 131-240 Sentence denotes Fungi have a plethora of chitinases, which can be phylogenetically divided into three subgroups (A, B and C).
T3 241-398 Sentence denotes Subgroup C (sgC) chitinases are especially interesting due to their multiple carbohydrate-binding modules, but they have not been investigated in detail yet.
T4 399-508 Sentence denotes In this study, we analyzed sgC chitinases in the mycoparasites Trichoderma atroviride and Trichoderma virens.
T5 509-722 Sentence denotes The expression of sgC chitinase genes in T. atroviride was induced during mycoparasitism of the fungal prey Botrytis cinerea, but not Rhizoctonia solani and correspondingly only by fungal cell walls of the former.
T6 723-864 Sentence denotes Interestingly, only few sgC chitinase genes were inducible by chitin, suggesting that non-chitinous cell wall components can act as inducers.
T7 865-1023 Sentence denotes In contrast, the transcriptional profile of the most abundantly expressed sgC chitinase gene tac6 indicated a role of the protein in hyphal network formation.
T8 1024-1132 Sentence denotes This shows that sgC chitinases have diverse functions and are not only involved in the mycoparasitic attack.
T9 1133-1355 Sentence denotes However, sequence analysis and 3D modelling revealed that TAC6 and also its ortholog in T. virens have potentially detrimental deletions in the substrate-binding site and are thus probably not catalytically active enzymes.
T10 1356-1574 Sentence denotes Genomic analysis showed that the genes neighboring sgC chitinases often encode proteins that are solely composed of multiple LysM modules, which were induced by similar stimuli as their neighboring sgC chitinase genes.
T11 1575-1672 Sentence denotes This study provides first insights into fungal sgC chitinases and their associated LysM proteins.

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 809-812 "http://rdf.glycoinfo.org/glycan/G02780QX" denotes non
GlycanIUPAC_T2 809-812 "http://rdf.glycoinfo.org/glycan/G18425DX" denotes non
GlycanIUPAC_T3 809-812 "http://rdf.glycoinfo.org/glycan/G18630JE" denotes non
GlycanIUPAC_T4 809-812 "http://rdf.glycoinfo.org/glycan/G01004IT" denotes non
GlycanIUPAC_T5 809-812 "http://rdf.glycoinfo.org/glycan/G87301QZ" denotes non
GlycanIUPAC_T6 809-812 "http://rdf.glycoinfo.org/glycan/G39790GW" denotes non
GlycanIUPAC_T7 809-812 "http://rdf.glycoinfo.org/glycan/G42928BB" denotes non
GlycanIUPAC_T8 809-812 "http://rdf.glycoinfo.org/glycan/G51134HC" denotes non
GlycanIUPAC_T9 809-812 "http://rdf.glycoinfo.org/glycan/G68183GR" denotes non
GlycanIUPAC_T10 809-812 "http://rdf.glycoinfo.org/glycan/G46883FA" denotes non
GlycanIUPAC_T11 809-812 "http://rdf.glycoinfo.org/glycan/G54702VY" denotes non

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 144-152 Phenotype denotes plethora HP:0001050

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 55-61 Glycan denotes chitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G97099AY
T2 785-791 Glycan denotes chitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G97099AY

GlyCosmos15-HP

Id Subject Object Predicate Lexical cue hp_id
T1 144-152 Phenotype denotes plethora HP:0001050

GlyCosmos15-NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 107-129 OrganismTaxon denotes Trichoderma atroviride 63577
T2 131-136 OrganismTaxon denotes Fungi 4751
T3 462-484 OrganismTaxon denotes Trichoderma atroviride 63577
T4 489-507 OrganismTaxon denotes Trichoderma virens 29875
T5 617-633 OrganismTaxon denotes Botrytis cinerea 40559
T6 643-661 OrganismTaxon denotes Rhizoctonia solani 456999

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 690-701 Cell denotes fungal cell http://purl.obolibrary.org/obo/CL:0000521

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 690-701 Body_part denotes fungal cell http://purl.obolibrary.org/obo/CL_0000521
T2 828-832 Body_part denotes wall http://purl.obolibrary.org/obo/UBERON_0000060

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-130 Sentence denotes Analysis of subgroup C of fungal chitinases containing chitin-binding and LysM modules in the mycoparasite Trichoderma atroviride.
TextSentencer_T2 131-240 Sentence denotes Fungi have a plethora of chitinases, which can be phylogenetically divided into three subgroups (A, B and C).
TextSentencer_T3 241-398 Sentence denotes Subgroup C (sgC) chitinases are especially interesting due to their multiple carbohydrate-binding modules, but they have not been investigated in detail yet.
TextSentencer_T4 399-508 Sentence denotes In this study, we analyzed sgC chitinases in the mycoparasites Trichoderma atroviride and Trichoderma virens.
TextSentencer_T5 509-722 Sentence denotes The expression of sgC chitinase genes in T. atroviride was induced during mycoparasitism of the fungal prey Botrytis cinerea, but not Rhizoctonia solani and correspondingly only by fungal cell walls of the former.
TextSentencer_T6 723-864 Sentence denotes Interestingly, only few sgC chitinase genes were inducible by chitin, suggesting that non-chitinous cell wall components can act as inducers.
TextSentencer_T7 865-1023 Sentence denotes In contrast, the transcriptional profile of the most abundantly expressed sgC chitinase gene tac6 indicated a role of the protein in hyphal network formation.
TextSentencer_T8 1024-1132 Sentence denotes This shows that sgC chitinases have diverse functions and are not only involved in the mycoparasitic attack.
TextSentencer_T9 1133-1355 Sentence denotes However, sequence analysis and 3D modelling revealed that TAC6 and also its ortholog in T. virens have potentially detrimental deletions in the substrate-binding site and are thus probably not catalytically active enzymes.
TextSentencer_T10 1356-1574 Sentence denotes Genomic analysis showed that the genes neighboring sgC chitinases often encode proteins that are solely composed of multiple LysM modules, which were induced by similar stimuli as their neighboring sgC chitinase genes.
TextSentencer_T11 1575-1672 Sentence denotes This study provides first insights into fungal sgC chitinases and their associated LysM proteins.
T1 0-130 Sentence denotes Analysis of subgroup C of fungal chitinases containing chitin-binding and LysM modules in the mycoparasite Trichoderma atroviride.
T2 131-240 Sentence denotes Fungi have a plethora of chitinases, which can be phylogenetically divided into three subgroups (A, B and C).
T3 241-398 Sentence denotes Subgroup C (sgC) chitinases are especially interesting due to their multiple carbohydrate-binding modules, but they have not been investigated in detail yet.
T4 399-508 Sentence denotes In this study, we analyzed sgC chitinases in the mycoparasites Trichoderma atroviride and Trichoderma virens.
T5 509-722 Sentence denotes The expression of sgC chitinase genes in T. atroviride was induced during mycoparasitism of the fungal prey Botrytis cinerea, but not Rhizoctonia solani and correspondingly only by fungal cell walls of the former.
T6 723-864 Sentence denotes Interestingly, only few sgC chitinase genes were inducible by chitin, suggesting that non-chitinous cell wall components can act as inducers.
T7 865-1023 Sentence denotes In contrast, the transcriptional profile of the most abundantly expressed sgC chitinase gene tac6 indicated a role of the protein in hyphal network formation.
T8 1024-1132 Sentence denotes This shows that sgC chitinases have diverse functions and are not only involved in the mycoparasitic attack.
T9 1133-1355 Sentence denotes However, sequence analysis and 3D modelling revealed that TAC6 and also its ortholog in T. virens have potentially detrimental deletions in the substrate-binding site and are thus probably not catalytically active enzymes.
T10 1356-1574 Sentence denotes Genomic analysis showed that the genes neighboring sgC chitinases often encode proteins that are solely composed of multiple LysM modules, which were induced by similar stimuli as their neighboring sgC chitinase genes.
T11 1575-1672 Sentence denotes This study provides first insights into fungal sgC chitinases and their associated LysM proteins.
T1 0-130 Sentence denotes Analysis of subgroup C of fungal chitinases containing chitin-binding and LysM modules in the mycoparasite Trichoderma atroviride.
T2 131-240 Sentence denotes Fungi have a plethora of chitinases, which can be phylogenetically divided into three subgroups (A, B and C).
T3 241-398 Sentence denotes Subgroup C (sgC) chitinases are especially interesting due to their multiple carbohydrate-binding modules, but they have not been investigated in detail yet.
T4 399-508 Sentence denotes In this study, we analyzed sgC chitinases in the mycoparasites Trichoderma atroviride and Trichoderma virens.
T5 509-722 Sentence denotes The expression of sgC chitinase genes in T. atroviride was induced during mycoparasitism of the fungal prey Botrytis cinerea, but not Rhizoctonia solani and correspondingly only by fungal cell walls of the former.
T6 723-864 Sentence denotes Interestingly, only few sgC chitinase genes were inducible by chitin, suggesting that non-chitinous cell wall components can act as inducers.
T7 865-1023 Sentence denotes In contrast, the transcriptional profile of the most abundantly expressed sgC chitinase gene tac6 indicated a role of the protein in hyphal network formation.
T8 1024-1132 Sentence denotes This shows that sgC chitinases have diverse functions and are not only involved in the mycoparasitic attack.
T9 1133-1355 Sentence denotes However, sequence analysis and 3D modelling revealed that TAC6 and also its ortholog in T. virens have potentially detrimental deletions in the substrate-binding site and are thus probably not catalytically active enzymes.
T10 1356-1574 Sentence denotes Genomic analysis showed that the genes neighboring sgC chitinases often encode proteins that are solely composed of multiple LysM modules, which were induced by similar stimuli as their neighboring sgC chitinase genes.
T11 1575-1672 Sentence denotes This study provides first insights into fungal sgC chitinases and their associated LysM proteins.

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-130 Sentence denotes Analysis of subgroup C of fungal chitinases containing chitin-binding and LysM modules in the mycoparasite Trichoderma atroviride.
T2 131-240 Sentence denotes Fungi have a plethora of chitinases, which can be phylogenetically divided into three subgroups (A, B and C).
T3 241-398 Sentence denotes Subgroup C (sgC) chitinases are especially interesting due to their multiple carbohydrate-binding modules, but they have not been investigated in detail yet.
T4 399-508 Sentence denotes In this study, we analyzed sgC chitinases in the mycoparasites Trichoderma atroviride and Trichoderma virens.
T5 509-722 Sentence denotes The expression of sgC chitinase genes in T. atroviride was induced during mycoparasitism of the fungal prey Botrytis cinerea, but not Rhizoctonia solani and correspondingly only by fungal cell walls of the former.
T6 723-864 Sentence denotes Interestingly, only few sgC chitinase genes were inducible by chitin, suggesting that non-chitinous cell wall components can act as inducers.
T7 865-1023 Sentence denotes In contrast, the transcriptional profile of the most abundantly expressed sgC chitinase gene tac6 indicated a role of the protein in hyphal network formation.
T8 1024-1132 Sentence denotes This shows that sgC chitinases have diverse functions and are not only involved in the mycoparasitic attack.
T9 1133-1355 Sentence denotes However, sequence analysis and 3D modelling revealed that TAC6 and also its ortholog in T. virens have potentially detrimental deletions in the substrate-binding site and are thus probably not catalytically active enzymes.
T10 1356-1574 Sentence denotes Genomic analysis showed that the genes neighboring sgC chitinases often encode proteins that are solely composed of multiple LysM modules, which were induced by similar stimuli as their neighboring sgC chitinase genes.
T11 1575-1672 Sentence denotes This study provides first insights into fungal sgC chitinases and their associated LysM proteins.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 55-61 Glycan denotes chitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G97099AY
T2 785-791 Glycan denotes chitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G97099AY

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 107-129 OrganismTaxon denotes Trichoderma atroviride 63577
T2 131-136 OrganismTaxon denotes Fungi 4751
T3 462-484 OrganismTaxon denotes Trichoderma atroviride 63577
T4 489-507 OrganismTaxon denotes Trichoderma virens 29875
T5 617-633 OrganismTaxon denotes Botrytis cinerea 40559
T6 643-661 OrganismTaxon denotes Rhizoctonia solani 456999

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 690-701 Body_part denotes fungal cell http://purl.obolibrary.org/obo/CL_0000521
T2 828-832 Body_part denotes wall http://purl.obolibrary.org/obo/UBERON_0000060