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PubMed:20833653 JSONTXT

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CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 1389-1401 Cell denotes fungal cells http://purl.obolibrary.org/obo/CL:0000521

Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 574-581 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T2 893-900 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T3 959-966 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose
T4 1253-1260 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose
T5 1265-1272 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 574-581 Glycan_Motif denotes mannose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ
T2 893-900 Glycan_Motif denotes mannose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ
T3 959-966 Glycan_Motif denotes glucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G15021LG
T4 1253-1260 Glycan_Motif denotes glucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G15021LG
T5 1265-1272 Glycan_Motif denotes mannose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-180 Sentence denotes Chemical structure of beta-galactofuranose-containing polysaccharide and O-linked oligosaccharides obtained from the cell wall of pathogenic dematiaceous fungus Fonsecaea pedrosoi.
TextSentencer_T2 181-304 Sentence denotes Fonsecaea pedrosoi is the main etiologic agent of chromoblastomycosis, usually occurring in tropical and subtropical areas.
TextSentencer_T3 305-424 Sentence denotes The cell wall components of pathogenic microorganisms behave as an antigen and/or ligand of the innate immune response.
TextSentencer_T4 425-613 Sentence denotes The cells of F. pedrosoi reacted with the α-galactopyranose-binding lectin (Griffonia simplicifolia lectin 1B4 isolectin, GSL 1B4), as well as the α-mannose-binding lectin, concanavalin A.
TextSentencer_T5 614-788 Sentence denotes The cell wall glycoprotein was isolated from conidial cells of F. pedrosoi, and its structure was analyzed by (1)H-nuclear magnetic resonance (NMR) and (13)C-NMR experiments.
TextSentencer_T6 789-979 Sentence denotes The N-linked polysaccharide moiety consists of a backbone β-1,6-linked galactofuranose and α-1,6-linked mannose polymers, both of which are substituted with α-1,2-linked glucose side-chains.
TextSentencer_T7 980-1141 Sentence denotes Furthermore, the glycoprotein contained a large amount of O-linked oligosaccharides, especially a hexaose that constituted approximately 20% of the glycoprotein.
TextSentencer_T8 1142-1293 Sentence denotes Unexpectedly, the hexaose had a highly branched structure which consisted of galactofuranose, galactopyranose, glucose and mannose residues as follows:
TextSentencer_T9 1294-1454 Sentence denotes An anti-F. pedrosoi antibody specifically reacted with the cells of F. pedrosoi, whereas other fungal cells that contain galactofuranose residues did not react.
TextSentencer_T10 1455-1651 Sentence denotes The reactivity of the antibody was strongly inhibited by the branched hexaose, suggesting that the characteristic structure of the O-linked hexaose involves the antigenic specificity of the cells.
T1 0-180 Sentence denotes Chemical structure of beta-galactofuranose-containing polysaccharide and O-linked oligosaccharides obtained from the cell wall of pathogenic dematiaceous fungus Fonsecaea pedrosoi.
T2 181-304 Sentence denotes Fonsecaea pedrosoi is the main etiologic agent of chromoblastomycosis, usually occurring in tropical and subtropical areas.
T3 305-424 Sentence denotes The cell wall components of pathogenic microorganisms behave as an antigen and/or ligand of the innate immune response.
T4 425-788 Sentence denotes The cells of F. pedrosoi reacted with the α-galactopyranose-binding lectin (Griffonia simplicifolia lectin 1B4 isolectin, GSL 1B4), as well as the α-mannose-binding lectin, concanavalin A. The cell wall glycoprotein was isolated from conidial cells of F. pedrosoi, and its structure was analyzed by (1)H-nuclear magnetic resonance (NMR) and (13)C-NMR experiments.
T5 789-979 Sentence denotes The N-linked polysaccharide moiety consists of a backbone β-1,6-linked galactofuranose and α-1,6-linked mannose polymers, both of which are substituted with α-1,2-linked glucose side-chains.
T6 980-1141 Sentence denotes Furthermore, the glycoprotein contained a large amount of O-linked oligosaccharides, especially a hexaose that constituted approximately 20% of the glycoprotein.
T7 1142-1293 Sentence denotes Unexpectedly, the hexaose had a highly branched structure which consisted of galactofuranose, galactopyranose, glucose and mannose residues as follows:
T8 1294-1454 Sentence denotes An anti-F. pedrosoi antibody specifically reacted with the cells of F. pedrosoi, whereas other fungal cells that contain galactofuranose residues did not react.
T9 1455-1651 Sentence denotes The reactivity of the antibody was strongly inhibited by the branched hexaose, suggesting that the characteristic structure of the O-linked hexaose involves the antigenic specificity of the cells.
T1 0-180 Sentence denotes Chemical structure of beta-galactofuranose-containing polysaccharide and O-linked oligosaccharides obtained from the cell wall of pathogenic dematiaceous fungus Fonsecaea pedrosoi.
T2 181-304 Sentence denotes Fonsecaea pedrosoi is the main etiologic agent of chromoblastomycosis, usually occurring in tropical and subtropical areas.
T3 305-424 Sentence denotes The cell wall components of pathogenic microorganisms behave as an antigen and/or ligand of the innate immune response.
T4 425-613 Sentence denotes The cells of F. pedrosoi reacted with the α-galactopyranose-binding lectin (Griffonia simplicifolia lectin 1B4 isolectin, GSL 1B4), as well as the α-mannose-binding lectin, concanavalin A.
T5 614-788 Sentence denotes The cell wall glycoprotein was isolated from conidial cells of F. pedrosoi, and its structure was analyzed by (1)H-nuclear magnetic resonance (NMR) and (13)C-NMR experiments.
T6 789-979 Sentence denotes The N-linked polysaccharide moiety consists of a backbone β-1,6-linked galactofuranose and α-1,6-linked mannose polymers, both of which are substituted with α-1,2-linked glucose side-chains.
T7 980-1141 Sentence denotes Furthermore, the glycoprotein contained a large amount of O-linked oligosaccharides, especially a hexaose that constituted approximately 20% of the glycoprotein.
T8 1142-1293 Sentence denotes Unexpectedly, the hexaose had a highly branched structure which consisted of galactofuranose, galactopyranose, glucose and mannose residues as follows:
T9 1294-1454 Sentence denotes An anti-F. pedrosoi antibody specifically reacted with the cells of F. pedrosoi, whereas other fungal cells that contain galactofuranose residues did not react.
T10 1455-1651 Sentence denotes The reactivity of the antibody was strongly inhibited by the branched hexaose, suggesting that the characteristic structure of the O-linked hexaose involves the antigenic specificity of the cells.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 574-581 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T2 893-900 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose
T3 959-966 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose
T4 1253-1260 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose
T5 1265-1272 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose

GlycoBiology-GDGDB

Id Subject Object Predicate Lexical cue
_T1 547-550 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00023 denotes GSL
_T2 572-581 http://acgg.asia/db/diseases/gdgdb?con_ui=CON00008 denotes α-mannose

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 54-68 FMAID:196779 denotes polysaccharide
_T2 54-68 FMAID:82785 denotes polysaccharide
_T3 54-68 FMAID:82746 denotes polysaccharide
_T4 54-68 FMAID:196735 denotes polysaccharide
_T5 82-98 FMAID:196731 denotes oligosaccharides
_T6 82-98 FMAID:82742 denotes oligosaccharides
_T7 207-211 FMAID:214734 denotes main
_T8 309-329 FMAID:200882 denotes cell wall components
_T9 309-329 FMAID:86454 denotes cell wall components
_T10 429-434 FMAID:169002 denotes cells
_T11 429-434 FMAID:68646 denotes cells
_T12 574-581 FMAID:196796 denotes mannose
_T13 574-581 FMAID:82801 denotes mannose
_T14 628-640 FMAID:167256 denotes glycoprotein
_T15 628-640 FMAID:62925 denotes glycoprotein
_T16 668-673 FMAID:68646 denotes cells
_T17 668-673 FMAID:169002 denotes cells
_T18 795-816 FMAID:82785 denotes linked polysaccharide
_T19 795-816 FMAID:196779 denotes linked polysaccharide
_T20 802-816 FMAID:82746 denotes polysaccharide
_T21 802-816 FMAID:196735 denotes polysaccharide
_T22 838-846 FMAID:102867 denotes backbone
_T23 893-900 FMAID:82801 denotes mannose
_T24 893-900 FMAID:196796 denotes mannose
_T25 959-966 FMAID:82743 denotes glucose
_T26 959-966 FMAID:196732 denotes glucose
_T27 997-1009 FMAID:62925 denotes glycoprotein
_T28 997-1009 FMAID:167256 denotes glycoprotein
_T29 1047-1063 FMAID:82742 denotes oligosaccharides
_T30 1047-1063 FMAID:196731 denotes oligosaccharides
_T31 1128-1140 FMAID:62925 denotes glycoprotein
_T32 1128-1140 FMAID:167256 denotes glycoprotein
_T33 1181-1189 FMAID:226028 denotes branched
_T34 1181-1189 FMAID:226027 denotes branched
_T35 1219-1251 FMAID:196788 denotes galactofuranose, galactopyranose
_T36 1219-1251 FMAID:82793 denotes galactofuranose, galactopyranose
_T37 1253-1260 FMAID:196732 denotes glucose
_T38 1253-1260 FMAID:82743 denotes glucose
_T39 1265-1272 FMAID:82801 denotes mannose
_T40 1265-1272 FMAID:196796 denotes mannose
_T41 1314-1322 FMAID:167180 denotes antibody
_T42 1353-1358 FMAID:169002 denotes cells
_T43 1353-1358 FMAID:68646 denotes cells
_T44 1396-1401 FMAID:169002 denotes cells
_T45 1396-1401 FMAID:68646 denotes cells
_T46 1477-1485 FMAID:167180 denotes antibody
_T47 1516-1524 FMAID:226028 denotes branched
_T48 1516-1524 FMAID:226027 denotes branched
_T49 1645-1650 FMAID:169002 denotes cells
_T50 1645-1650 FMAID:68646 denotes cells

uniprot-human

Id Subject Object Predicate Lexical cue
T1 574-596 http://www.uniprot.org/uniprot/Q9UQG6 denotes mannose-binding lectin
T2 574-596 http://www.uniprot.org/uniprot/Q12907 denotes mannose-binding lectin
T3 574-596 http://www.uniprot.org/uniprot/Q96TF8 denotes mannose-binding lectin

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 22-26 http://purl.bioontology.org/ontology/NCBITAXON/158455 denotes beta
T2 22-26 http://purl.bioontology.org/ontology/NCBITAXON/3554 denotes beta
T3 154-160 http://purl.bioontology.org/ontology/STY/T004 denotes fungus
T4 161-179 http://purl.bioontology.org/ontology/NCBITAXON/40355 denotes Fonsecaea pedrosoi
T5 181-199 http://purl.bioontology.org/ontology/NCBITAXON/40355 denotes Fonsecaea pedrosoi
T6 298-303 http://purl.bioontology.org/ontology/NCBITAXON/293505 denotes areas
T7 429-434 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T8 501-510 http://purl.bioontology.org/ontology/NCBITAXON/3849 denotes Griffonia
T9 501-524 http://purl.bioontology.org/ontology/NCBITAXON/3850 denotes Griffonia simplicifolia
T10 511-524 http://purl.bioontology.org/ontology/NCBITAXON/941451 denotes simplicifolia
T11 668-673 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T12 1353-1358 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T13 1396-1401 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T14 1645-1650 http://purl.bioontology.org/ontology/STY/T025 denotes cells

GO-BP

Id Subject Object Predicate Lexical cue
T1 401-414 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune
T2 401-423 http://purl.obolibrary.org/obo/GO_0045089 denotes innate immune response
T3 401-423 http://purl.obolibrary.org/obo/GO_0002218 denotes innate immune response
T4 401-423 http://purl.obolibrary.org/obo/GO_0045824 denotes innate immune response
T5 401-423 http://purl.obolibrary.org/obo/GO_0045087 denotes innate immune response
T6 401-423 http://purl.obolibrary.org/obo/GO_0045088 denotes innate immune response
T7 401-423 http://purl.obolibrary.org/obo/GO_0002227 denotes innate immune response
T8 408-423 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response
T9 408-434 http://purl.obolibrary.org/obo/GO_0002443 denotes immune response. The cells
T10 408-434 http://purl.obolibrary.org/obo/GO_0002418 denotes immune response. The cells
T11 618-640 http://purl.obolibrary.org/obo/GO_0031506 denotes cell wall glycoprotein

GO-MF

Id Subject Object Predicate Lexical cue
T1 387-393 http://purl.obolibrary.org/obo/GO_0005488 denotes ligand
T2 485-492 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T3 582-589 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T4 485-492 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T5 582-589 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T6 485-492 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T7 582-589 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T8 485-492 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T9 582-589 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T10 574-589 http://purl.obolibrary.org/obo/GO_0005537 denotes mannose-binding
T11 574-596 http://purl.obolibrary.org/obo/GO_0005537 denotes mannose-binding lectin
T12 1314-1322 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody
T13 1477-1485 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody

GO-CC

Id Subject Object Predicate Lexical cue
T1 117-121 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2 309-313 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3 429-434 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T4 668-673 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5 1353-1358 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T6 1396-1401 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T7 1645-1650 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T8 117-126 http://purl.obolibrary.org/obo/GO_0005618 denotes cell wall
T9 309-318 http://purl.obolibrary.org/obo/GO_0005618 denotes cell wall
T10 618-627 http://purl.obolibrary.org/obo/GO_0005618 denotes cell wall

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 231-250 Disease denotes chromoblastomycosis http://purl.obolibrary.org/obo/MONDO_0015908

Lectin-Jamboree-Sentence

Id Subject Object Predicate Lexical cue
T1 0-180 Sentence denotes Chemical structure of beta-galactofuranose-containing polysaccharide and O-linked oligosaccharides obtained from the cell wall of pathogenic dematiaceous fungus Fonsecaea pedrosoi.
T2 181-304 Sentence denotes Fonsecaea pedrosoi is the main etiologic agent of chromoblastomycosis, usually occurring in tropical and subtropical areas.
T3 305-424 Sentence denotes The cell wall components of pathogenic microorganisms behave as an antigen and/or ligand of the innate immune response.
T4 425-788 Sentence denotes The cells of F. pedrosoi reacted with the α-galactopyranose-binding lectin (Griffonia simplicifolia lectin 1B4 isolectin, GSL 1B4), as well as the α-mannose-binding lectin, concanavalin A. The cell wall glycoprotein was isolated from conidial cells of F. pedrosoi, and its structure was analyzed by (1)H-nuclear magnetic resonance (NMR) and (13)C-NMR experiments.
T5 789-979 Sentence denotes The N-linked polysaccharide moiety consists of a backbone β-1,6-linked galactofuranose and α-1,6-linked mannose polymers, both of which are substituted with α-1,2-linked glucose side-chains.
T6 980-1141 Sentence denotes Furthermore, the glycoprotein contained a large amount of O-linked oligosaccharides, especially a hexaose that constituted approximately 20% of the glycoprotein.
T7 1142-1293 Sentence denotes Unexpectedly, the hexaose had a highly branched structure which consisted of galactofuranose, galactopyranose, glucose and mannose residues as follows:
T8 1294-1454 Sentence denotes An anti-F. pedrosoi antibody specifically reacted with the cells of F. pedrosoi, whereas other fungal cells that contain galactofuranose residues did not react.
T9 1455-1651 Sentence denotes The reactivity of the antibody was strongly inhibited by the branched hexaose, suggesting that the characteristic structure of the O-linked hexaose involves the antigenic specificity of the cells.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 161-179 OrganismTaxon denotes Fonsecaea pedrosoi 40355
T2 181-199 OrganismTaxon denotes Fonsecaea pedrosoi 40355
T3 501-524 OrganismTaxon denotes Griffonia simplicifolia 3850

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 122-126 Body_part denotes wall http://purl.obolibrary.org/obo/UBERON_0000060
T2 314-318 Body_part denotes wall http://purl.obolibrary.org/obo/UBERON_0000060
T3 623-627 Body_part denotes wall http://purl.obolibrary.org/obo/UBERON_0000060
T4 838-846 Body_part denotes backbone http://purl.obolibrary.org/obo/UBERON_0001130
T5 1389-1401 Body_part denotes fungal cells http://purl.obolibrary.org/obo/CL_0000521