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Inflammaging

Id Subject Object Predicate Lexical cue
T1 0-163 Sentence denotes Lack of association of C-C chemokine receptor 5 Δ32 deletion status with rheumatoid arthritis, systemic lupus erythematosus, lupus nephritis, and disease severity.
T2 164-247 Sentence denotes OBJECTIVE: C-C chemokine receptor 5 (CCR5) plays an important role in inflammation.
T3 248-329 Sentence denotes A 32 base-pair (Δ32) deletion in the CCR5 gene leads to a nonfunctional receptor.
T4 330-456 Sentence denotes This deletion has been reported to have a protective effect on the development and progression of several autoimmune diseases.
T5 457-713 Sentence denotes We investigated whether the Δ32 deletion is associated with disease susceptibility in a population of patients with rheumatoid arthritis (RA), systemic lupus erythematosus (SLE), and lupus nephritis (LN); and whether it is associated with disease severity.
T6 714-857 Sentence denotes METHODS: DNA samples from 405 RA patients, 97 SLE patients, 113 LN patients, and 431 healthy controls were genotyped for the CCR5 Δ32 deletion.
T7 858-936 Sentence denotes Differences in genotype frequencies were tested between patients and controls.
T8 937-997 Sentence denotes Association of genotypes with disease severity was analyzed.
T9 998-1006 Sentence denotes RESULTS:
T10 1007-1077 Sentence denotes Genotype frequencies of each group were in Hardy-Weinberg equilibrium.
T11 1078-1275 Sentence denotes The genotype frequencies of patients did not differ significantly from controls (CCR5/Δ32, Δ32/Δ32: RA 18.3% and 1.2%, respectively; SLE 17.5% and 2.1%; LN 13.3% and 1.8%; controls 20.0% and 2.8%).
T12 1276-1390 Sentence denotes However, there was a trend for lower Δ32 deletion allele frequency in LN patients compared to controls (p = 0.08).
T13 1391-1491 Sentence denotes There was no significant association between the CCR5 status and disease severity in RA, SLE, or LN.
T14 1492-1503 Sentence denotes CONCLUSION:
T15 1504-1651 Sentence denotes Although an association with LN cannot be excluded, the CCR5 Δ32 deletion does not seem to be a disease susceptibility genotype for RA, SLE, or LN.
T16 1652-1731 Sentence denotes No significant effect of the Δ32 deletion on disease severity was demonstrated.
T1 0-163 Sentence denotes Lack of association of C-C chemokine receptor 5 Δ32 deletion status with rheumatoid arthritis, systemic lupus erythematosus, lupus nephritis, and disease severity.
T2 164-247 Sentence denotes OBJECTIVE: C-C chemokine receptor 5 (CCR5) plays an important role in inflammation.
T3 248-329 Sentence denotes A 32 base-pair (Δ32) deletion in the CCR5 gene leads to a nonfunctional receptor.
T4 330-456 Sentence denotes This deletion has been reported to have a protective effect on the development and progression of several autoimmune diseases.
T5 457-713 Sentence denotes We investigated whether the Δ32 deletion is associated with disease susceptibility in a population of patients with rheumatoid arthritis (RA), systemic lupus erythematosus (SLE), and lupus nephritis (LN); and whether it is associated with disease severity.
T6 714-857 Sentence denotes METHODS: DNA samples from 405 RA patients, 97 SLE patients, 113 LN patients, and 431 healthy controls were genotyped for the CCR5 Δ32 deletion.
T7 858-936 Sentence denotes Differences in genotype frequencies were tested between patients and controls.
T8 937-997 Sentence denotes Association of genotypes with disease severity was analyzed.
T9 998-1006 Sentence denotes RESULTS:
T10 1007-1077 Sentence denotes Genotype frequencies of each group were in Hardy-Weinberg equilibrium.
T11 1078-1275 Sentence denotes The genotype frequencies of patients did not differ significantly from controls (CCR5/Δ32, Δ32/Δ32: RA 18.3% and 1.2%, respectively; SLE 17.5% and 2.1%; LN 13.3% and 1.8%; controls 20.0% and 2.8%).
T12 1276-1390 Sentence denotes However, there was a trend for lower Δ32 deletion allele frequency in LN patients compared to controls (p = 0.08).
T13 1391-1491 Sentence denotes There was no significant association between the CCR5 status and disease severity in RA, SLE, or LN.
T14 1492-1503 Sentence denotes CONCLUSION:
T15 1504-1651 Sentence denotes Although an association with LN cannot be excluded, the CCR5 Δ32 deletion does not seem to be a disease susceptibility genotype for RA, SLE, or LN.
T16 1652-1731 Sentence denotes No significant effect of the Δ32 deletion on disease severity was demonstrated.

LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-163 Sentence denotes Lack of association of C-C chemokine receptor 5 Δ32 deletion status with rheumatoid arthritis, systemic lupus erythematosus, lupus nephritis, and disease severity.
T2 164-247 Sentence denotes OBJECTIVE: C-C chemokine receptor 5 (CCR5) plays an important role in inflammation.
T3 248-329 Sentence denotes A 32 base-pair (Δ32) deletion in the CCR5 gene leads to a nonfunctional receptor.
T4 330-456 Sentence denotes This deletion has been reported to have a protective effect on the development and progression of several autoimmune diseases.
T5 457-713 Sentence denotes We investigated whether the Δ32 deletion is associated with disease susceptibility in a population of patients with rheumatoid arthritis (RA), systemic lupus erythematosus (SLE), and lupus nephritis (LN); and whether it is associated with disease severity.
T6 714-857 Sentence denotes METHODS: DNA samples from 405 RA patients, 97 SLE patients, 113 LN patients, and 431 healthy controls were genotyped for the CCR5 Δ32 deletion.
T7 858-936 Sentence denotes Differences in genotype frequencies were tested between patients and controls.
T8 937-997 Sentence denotes Association of genotypes with disease severity was analyzed.
T9 998-1006 Sentence denotes RESULTS:
T10 1007-1077 Sentence denotes Genotype frequencies of each group were in Hardy-Weinberg equilibrium.
T12 1276-1390 Sentence denotes However, there was a trend for lower Δ32 deletion allele frequency in LN patients compared to controls (p = 0.08).
T13 1391-1491 Sentence denotes There was no significant association between the CCR5 status and disease severity in RA, SLE, or LN.
T14 1492-1503 Sentence denotes CONCLUSION:
T15 1504-1651 Sentence denotes Although an association with LN cannot be excluded, the CCR5 Δ32 deletion does not seem to be a disease susceptibility genotype for RA, SLE, or LN.
T16 1652-1731 Sentence denotes No significant effect of the Δ32 deletion on disease severity was demonstrated.
T11 1078-1275 Sentence denotes The genotype frequencies of patients did not differ significantly from controls (CCR5/Δ32, Δ32/Δ32: RA 18.3% and 1.2%, respectively; SLE 17.5% and 2.1%; LN 13.3% and 1.8%; controls 20.0% and 2.8%).

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
7740 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5 NCBIGene:1234
7741 48-60 SequenceVariant denotes Δ32 deletion c|DEL||32
7742 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis MESH:D001172
7743 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus MESH:D008180
7744 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis MESH:D008181
7745 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5 NCBIGene:1234
7746 201-205 GeneOrGeneProduct denotes CCR5 NCBIGene:1234
7747 234-246 DiseaseOrPhenotypicFeature denotes inflammation MESH:D007249
7748 250-277 SequenceVariant denotes 32 base-pair (Δ32) deletion c|DEL||32
7749 285-289 GeneOrGeneProduct denotes CCR5 NCBIGene:1234
7750 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases MESH:D001327
7751 485-497 SequenceVariant denotes Δ32 deletion c|DEL||32
7752 559-567 OrganismTaxon denotes patients NCBITaxon:9606
7753 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis MESH:D001172
7754 595-597 DiseaseOrPhenotypicFeature denotes RA MESH:D001172
7755 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus MESH:D008180
7756 630-633 DiseaseOrPhenotypicFeature denotes SLE MESH:D008180
7757 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis MESH:D008181
7758 657-659 DiseaseOrPhenotypicFeature denotes LN MESH:D008181
7759 744-746 DiseaseOrPhenotypicFeature denotes RA MESH:D001172
7760 747-755 OrganismTaxon denotes patients NCBITaxon:9606
7761 760-763 DiseaseOrPhenotypicFeature denotes SLE MESH:D008180
7762 764-772 OrganismTaxon denotes patients NCBITaxon:9606
7763 778-780 DiseaseOrPhenotypicFeature denotes LN MESH:D008181
7764 781-789 OrganismTaxon denotes patients NCBITaxon:9606
7765 839-843 GeneOrGeneProduct denotes CCR5 NCBIGene:1234
7766 844-856 SequenceVariant denotes Δ32 deletion c|DEL||32
7767 914-922 OrganismTaxon denotes patients NCBITaxon:9606
7768 1106-1114 OrganismTaxon denotes patients NCBITaxon:9606
7769 1159-1163 GeneOrGeneProduct denotes CCR5 NCBIGene:1234
7770 1164-1167 SequenceVariant denotes Δ32 c|DEL||32
7771 1169-1172 SequenceVariant denotes Δ32 c|DEL||32
7772 1173-1176 SequenceVariant denotes Δ32 c|DEL||32
7773 1178-1180 DiseaseOrPhenotypicFeature denotes RA MESH:D001172
7774 1211-1214 DiseaseOrPhenotypicFeature denotes SLE MESH:D008180
7775 1231-1233 DiseaseOrPhenotypicFeature denotes LN MESH:D008181
7776 1313-1325 SequenceVariant denotes Δ32 deletion c|DEL||32
7777 1346-1348 DiseaseOrPhenotypicFeature denotes LN MESH:D008181
7778 1349-1357 OrganismTaxon denotes patients NCBITaxon:9606
7779 1440-1444 GeneOrGeneProduct denotes CCR5 NCBIGene:1234
7780 1476-1478 DiseaseOrPhenotypicFeature denotes RA MESH:D001172
7781 1480-1483 DiseaseOrPhenotypicFeature denotes SLE MESH:D008180
7782 1488-1490 DiseaseOrPhenotypicFeature denotes LN MESH:D008181
7783 1533-1535 DiseaseOrPhenotypicFeature denotes LN MESH:D008181
7784 1560-1564 GeneOrGeneProduct denotes CCR5 NCBIGene:1234
7785 1565-1577 SequenceVariant denotes Δ32 deletion c|DEL||32
7786 1636-1638 DiseaseOrPhenotypicFeature denotes RA MESH:D001172
7787 1640-1643 DiseaseOrPhenotypicFeature denotes SLE MESH:D008180
7788 1648-1650 DiseaseOrPhenotypicFeature denotes LN MESH:D008181
7789 1681-1693 SequenceVariant denotes Δ32 deletion c|DEL||32

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis 0008383
T2 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus 0007915
T3 104-123 DiseaseOrPhenotypicFeature denotes lupus erythematosus 0004670
T4 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis 0005556
T5 131-140 DiseaseOrPhenotypicFeature denotes nephritis 0001166
T6 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases 0007179
T7 517-539 DiseaseOrPhenotypicFeature denotes disease susceptibility 0042489
T8 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis 0008383
T9 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus 0007915
T10 609-628 DiseaseOrPhenotypicFeature denotes lupus erythematosus 0004670
T11 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis 0005556
T12 646-655 DiseaseOrPhenotypicFeature denotes nephritis 0001166
T13 1600-1622 DiseaseOrPhenotypicFeature denotes disease susceptibility 0042489

LitCoin-SeqVar

Id Subject Object Predicate Lexical cue
T1 48-51 SequenceVariant denotes Δ32
T2 264-267 SequenceVariant denotes Δ32
T3 485-488 SequenceVariant denotes Δ32
T4 844-847 SequenceVariant denotes Δ32
T5 1164-1167 SequenceVariant denotes Δ32
T6 1169-1172 SequenceVariant denotes Δ32
T7 1173-1176 SequenceVariant denotes Δ32
T8 1313-1316 SequenceVariant denotes Δ32
T9 1565-1568 SequenceVariant denotes Δ32
T10 1681-1684 SequenceVariant denotes Δ32

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 0-4 GeneOrGeneProduct denotes Lack
T2 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T3 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T4 201-205 GeneOrGeneProduct denotes CCR5
T5 253-257 GeneOrGeneProduct denotes base
T6 258-262 GeneOrGeneProduct denotes pair
T7 285-289 GeneOrGeneProduct denotes CCR5
T8 320-328 GeneOrGeneProduct denotes receptor
T9 540-544 GeneOrGeneProduct denotes in a
T10 714-721 GeneOrGeneProduct denotes METHODS
T11 839-843 GeneOrGeneProduct denotes CCR5
T12 882-893 GeneOrGeneProduct denotes frequencies
T13 899-905 GeneOrGeneProduct denotes tested
T14 1016-1027 GeneOrGeneProduct denotes frequencies
T15 1050-1055 GeneOrGeneProduct denotes Hardy
T16 1091-1102 GeneOrGeneProduct denotes frequencies
T17 1159-1163 GeneOrGeneProduct denotes CCR5
T18 1221-1228 GeneOrGeneProduct denotes and 2.1
T19 1333-1342 GeneOrGeneProduct denotes frequency
T20 1440-1444 GeneOrGeneProduct denotes CCR5
T21 1560-1564 GeneOrGeneProduct denotes CCR5

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 0-4 GeneOrGeneProduct denotes Lack
T2 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T3 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T4 201-205 GeneOrGeneProduct denotes CCR5
T5 285-289 GeneOrGeneProduct denotes CCR5
T6 320-328 GeneOrGeneProduct denotes receptor
T7 839-843 GeneOrGeneProduct denotes CCR5
T8 1159-1163 GeneOrGeneProduct denotes CCR5
T9 1333-1342 GeneOrGeneProduct denotes frequency
T10 1440-1444 GeneOrGeneProduct denotes CCR5
T11 1560-1564 GeneOrGeneProduct denotes CCR5

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis D001172
T2 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus D008180
T3 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis D008181
T4 146-153 DiseaseOrPhenotypicFeature denotes disease D004194
T5 234-246 DiseaseOrPhenotypicFeature denotes inflammation D007249
T6 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases D001327
T7 517-539 DiseaseOrPhenotypicFeature denotes disease susceptibility D004198
T8 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis D001172
T9 595-597 DiseaseOrPhenotypicFeature denotes RA D001172
T10 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus D008180
T11 630-633 DiseaseOrPhenotypicFeature denotes SLE D008180
T12 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis D008181
T13 657-659 DiseaseOrPhenotypicFeature denotes LN D008181
T14 696-703 DiseaseOrPhenotypicFeature denotes disease D004194
T15 744-746 DiseaseOrPhenotypicFeature denotes RA D001172
T16 760-763 DiseaseOrPhenotypicFeature denotes SLE D008180
T17 778-780 DiseaseOrPhenotypicFeature denotes LN D008181
T18 967-974 DiseaseOrPhenotypicFeature denotes disease D004194
T19 1178-1180 DiseaseOrPhenotypicFeature denotes RA D001172
T20 1211-1214 DiseaseOrPhenotypicFeature denotes SLE D008180
T21 1231-1233 DiseaseOrPhenotypicFeature denotes LN D008181
T22 1346-1348 DiseaseOrPhenotypicFeature denotes LN D008181
T23 1456-1463 DiseaseOrPhenotypicFeature denotes disease D004194
T24 1476-1478 DiseaseOrPhenotypicFeature denotes RA D001172
T25 1480-1483 DiseaseOrPhenotypicFeature denotes SLE D008180
T26 1488-1490 DiseaseOrPhenotypicFeature denotes LN D008181
T27 1533-1535 DiseaseOrPhenotypicFeature denotes LN D008181
T28 1600-1622 DiseaseOrPhenotypicFeature denotes disease susceptibility D004198
T29 1636-1638 DiseaseOrPhenotypicFeature denotes RA D001172
T30 1640-1643 DiseaseOrPhenotypicFeature denotes SLE D008180
T31 1648-1650 DiseaseOrPhenotypicFeature denotes LN D008181
T32 1697-1704 DiseaseOrPhenotypicFeature denotes disease D004194

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T3 201-205 GeneOrGeneProduct denotes CCR5
T4 285-289 GeneOrGeneProduct denotes CCR5
T5 839-843 GeneOrGeneProduct denotes CCR5
T6 1159-1163 GeneOrGeneProduct denotes CCR5
T7 1440-1444 GeneOrGeneProduct denotes CCR5
T8 1560-1564 GeneOrGeneProduct denotes CCR5

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis 0008383
T2 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus 0007915
T3 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis 0005556
T4 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases 0007179
T5 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis 0008383
T6 595-597 DiseaseOrPhenotypicFeature denotes RA 0008383|0005272
T8 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus 0007915
T9 630-633 DiseaseOrPhenotypicFeature denotes SLE 0007915
T10 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis 0005556
T11 657-659 DiseaseOrPhenotypicFeature denotes LN 0002486|0005556
T13 744-746 DiseaseOrPhenotypicFeature denotes RA 0008383|0005272
T15 760-763 DiseaseOrPhenotypicFeature denotes SLE 0007915
T16 778-780 DiseaseOrPhenotypicFeature denotes LN 0002486|0005556
T18 1178-1180 DiseaseOrPhenotypicFeature denotes RA 0008383|0005272
T20 1211-1214 DiseaseOrPhenotypicFeature denotes SLE 0007915
T21 1231-1233 DiseaseOrPhenotypicFeature denotes LN 0002486|0005556
T23 1346-1348 DiseaseOrPhenotypicFeature denotes LN 0002486|0005556
T25 1476-1478 DiseaseOrPhenotypicFeature denotes RA 0008383|0005272
T27 1480-1483 DiseaseOrPhenotypicFeature denotes SLE 0007915
T28 1488-1490 DiseaseOrPhenotypicFeature denotes LN 0002486|0005556
T30 1533-1535 DiseaseOrPhenotypicFeature denotes LN 0002486|0005556
T32 1636-1638 DiseaseOrPhenotypicFeature denotes RA 0008383|0005272
T34 1640-1643 DiseaseOrPhenotypicFeature denotes SLE 0007915
T35 1648-1650 DiseaseOrPhenotypicFeature denotes LN 0002486|0005556

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis D001172
T2 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus D008180
T3 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis D008181
T4 146-153 DiseaseOrPhenotypicFeature denotes disease D004194
T5 234-246 DiseaseOrPhenotypicFeature denotes inflammation DISEASE|D007249
T7 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases D001327
T8 517-539 DiseaseOrPhenotypicFeature denotes disease susceptibility D004198
T9 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis D001172
T10 595-597 DiseaseOrPhenotypicFeature denotes RA D001172
T11 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus D008180
T12 630-633 DiseaseOrPhenotypicFeature denotes SLE D008180
T13 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis D008181
T14 657-659 DiseaseOrPhenotypicFeature denotes LN D008181
T15 696-703 DiseaseOrPhenotypicFeature denotes disease D004194
T16 744-746 DiseaseOrPhenotypicFeature denotes RA D001172
T17 760-763 DiseaseOrPhenotypicFeature denotes SLE D008180
T18 778-780 DiseaseOrPhenotypicFeature denotes LN D008181
T19 967-974 DiseaseOrPhenotypicFeature denotes disease D004194
T20 1178-1180 DiseaseOrPhenotypicFeature denotes RA D001172
T21 1211-1214 DiseaseOrPhenotypicFeature denotes SLE D008180
T22 1231-1233 DiseaseOrPhenotypicFeature denotes LN D008181
T23 1346-1348 DiseaseOrPhenotypicFeature denotes LN D008181
T24 1456-1463 DiseaseOrPhenotypicFeature denotes disease D004194
T25 1476-1478 DiseaseOrPhenotypicFeature denotes RA D001172
T26 1480-1483 DiseaseOrPhenotypicFeature denotes SLE D008180
T27 1488-1490 DiseaseOrPhenotypicFeature denotes LN D008181
T28 1533-1535 DiseaseOrPhenotypicFeature denotes LN D008181
T29 1600-1622 DiseaseOrPhenotypicFeature denotes disease susceptibility D004198
T30 1636-1638 DiseaseOrPhenotypicFeature denotes RA D001172
T31 1640-1643 DiseaseOrPhenotypicFeature denotes SLE D008180
T32 1648-1650 DiseaseOrPhenotypicFeature denotes LN D008181
T33 1697-1704 DiseaseOrPhenotypicFeature denotes disease D004194

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis D001172
T2 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus D008180
T3 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis D008181
T4 234-246 DiseaseOrPhenotypicFeature denotes inflammation D007249
T5 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases D001327
T6 517-539 DiseaseOrPhenotypicFeature denotes disease susceptibility D004198
T7 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis D001172
T8 595-597 DiseaseOrPhenotypicFeature denotes RA D001172
T9 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus D008180
T10 630-633 DiseaseOrPhenotypicFeature denotes SLE D008180
T11 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis D008181
T12 657-659 DiseaseOrPhenotypicFeature denotes LN D008181
T13 744-746 DiseaseOrPhenotypicFeature denotes RA D001172
T14 760-763 DiseaseOrPhenotypicFeature denotes SLE D008180
T15 778-780 DiseaseOrPhenotypicFeature denotes LN D008181
T16 1178-1180 DiseaseOrPhenotypicFeature denotes RA D001172
T17 1211-1214 DiseaseOrPhenotypicFeature denotes SLE D008180
T18 1231-1233 DiseaseOrPhenotypicFeature denotes LN D008181
T19 1346-1348 DiseaseOrPhenotypicFeature denotes LN D008181
T20 1476-1478 DiseaseOrPhenotypicFeature denotes RA D001172
T21 1480-1483 DiseaseOrPhenotypicFeature denotes SLE D008180
T22 1488-1490 DiseaseOrPhenotypicFeature denotes LN D008181
T23 1533-1535 DiseaseOrPhenotypicFeature denotes LN D008181
T24 1600-1622 DiseaseOrPhenotypicFeature denotes disease susceptibility D004198
T25 1636-1638 DiseaseOrPhenotypicFeature denotes RA D001172
T26 1640-1643 DiseaseOrPhenotypicFeature denotes SLE D008180
T27 1648-1650 DiseaseOrPhenotypicFeature denotes LN D008181

LitCoin-NCBITaxon-2

Id Subject Object Predicate Lexical cue
T1 559-567 OrganismTaxon denotes patients
T2 747-755 OrganismTaxon denotes patients
T3 764-772 OrganismTaxon denotes patients
T4 781-789 OrganismTaxon denotes patients
T5 914-922 OrganismTaxon denotes patients
T6 1106-1114 OrganismTaxon denotes patients
T7 1349-1357 OrganismTaxon denotes patients

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label
T8 1560-1564 GeneOrGeneProduct denotes CCR5
T7 1440-1444 GeneOrGeneProduct denotes CCR5
T6 1159-1163 GeneOrGeneProduct denotes CCR5
T5 839-843 GeneOrGeneProduct denotes CCR5
T4 285-289 GeneOrGeneProduct denotes CCR5
T3 201-205 GeneOrGeneProduct denotes CCR5
T2 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T27 1648-1650 DiseaseOrPhenotypicFeature denotes LN D008181
T26 1640-1643 DiseaseOrPhenotypicFeature denotes SLE D008180
T25 1636-1638 DiseaseOrPhenotypicFeature denotes RA D001172
T24 1600-1622 DiseaseOrPhenotypicFeature denotes disease susceptibility D004198
T23 1533-1535 DiseaseOrPhenotypicFeature denotes LN D008181
T22 1488-1490 DiseaseOrPhenotypicFeature denotes LN D008181
T21 1480-1483 DiseaseOrPhenotypicFeature denotes SLE D008180
T20 1476-1478 DiseaseOrPhenotypicFeature denotes RA D001172
T19 1346-1348 DiseaseOrPhenotypicFeature denotes LN D008181
T18 1231-1233 DiseaseOrPhenotypicFeature denotes LN D008181
T17 1211-1214 DiseaseOrPhenotypicFeature denotes SLE D008180
T16 1178-1180 DiseaseOrPhenotypicFeature denotes RA D001172
T15 778-780 DiseaseOrPhenotypicFeature denotes LN D008181
T14 760-763 DiseaseOrPhenotypicFeature denotes SLE D008180
T13 744-746 DiseaseOrPhenotypicFeature denotes RA D001172
T12 657-659 DiseaseOrPhenotypicFeature denotes LN D008181
T11 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis D008181
T10 630-633 DiseaseOrPhenotypicFeature denotes SLE D008180
T9 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus D008180
T39944 595-597 DiseaseOrPhenotypicFeature denotes RA D001172
T70569 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis D001172
T73101 517-539 DiseaseOrPhenotypicFeature denotes disease susceptibility D004198
T33370 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases D001327
T57318 234-246 DiseaseOrPhenotypicFeature denotes inflammation D007249
T984 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis D008181
T72265 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus D008180
T54002 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis D001172
T25406 1349-1357 OrganismTaxon denotes patients
T62742 1106-1114 OrganismTaxon denotes patients
T19741 914-922 OrganismTaxon denotes patients
T29556 781-789 OrganismTaxon denotes patients
T98729 764-772 OrganismTaxon denotes patients
T79638 747-755 OrganismTaxon denotes patients
T49316 559-567 OrganismTaxon denotes patients
T11116 1681-1684 SequenceVariant denotes Δ32
T32460 1565-1568 SequenceVariant denotes Δ32
T90511 1313-1316 SequenceVariant denotes Δ32
T66280 1173-1176 SequenceVariant denotes Δ32
T25351 1169-1172 SequenceVariant denotes Δ32
T60590 1164-1167 SequenceVariant denotes Δ32
T50336 844-847 SequenceVariant denotes Δ32
T90644 485-488 SequenceVariant denotes Δ32
T49628 264-267 SequenceVariant denotes Δ32
T39765 48-51 SequenceVariant denotes Δ32

DisGeNET

Id Subject Object Predicate Lexical cue
T0 1440-1444 gene:1234 denotes CCR5
T1 1476-1478 disease:C0003873 denotes RA
T2 1560-1564 gene:1234 denotes CCR5
T3 1636-1638 disease:C0003873 denotes RA
R1 T0 T1 associated_with CCR5,RA
R2 T2 T3 associated_with CCR5,RA

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 436-455 HP_0002960 denotes autoimmune diseases
T2 436-446 HP_0002960 denotes autoimmune
T3 573-593 HP_0001370 denotes rheumatoid arthritis
T4 584-593 HP_0001369 denotes arthritis
T5 600-628 HP_0002725 denotes systemic lupus erythematosus
T6 646-655 HP_0000123 denotes nephritis

Allie

Id Subject Object Predicate Lexical cue
SS1_20682662_2_0 175-199 expanded denotes C-C chemokine receptor 5
SS2_20682662_2_0 201-205 abbr denotes CCR5
SS1_20682662_5_0 573-593 expanded denotes rheumatoid arthritis
SS2_20682662_5_0 595-597 abbr denotes RA
SS1_20682662_5_1 600-628 expanded denotes systemic lupus erythematosus
SS2_20682662_5_1 630-633 abbr denotes SLE
SS1_20682662_5_2 640-655 expanded denotes lupus nephritis
SS2_20682662_5_2 657-659 abbr denotes LN
AE1_20682662_2_0 SS1_20682662_2_0 SS2_20682662_2_0 abbreviatedTo C-C chemokine receptor 5,CCR5
AE1_20682662_5_0 SS1_20682662_5_0 SS2_20682662_5_0 abbreviatedTo rheumatoid arthritis,RA
AE1_20682662_5_1 SS1_20682662_5_1 SS2_20682662_5_1 abbreviatedTo systemic lupus erythematosus,SLE
AE1_20682662_5_2 SS1_20682662_5_2 SS2_20682662_5_2 abbreviatedTo lupus nephritis,LN

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
20682662-12#56#60#gene1234 1560-1564 gene1234 denotes CCR5
20682662-12#132#134#diseaseC0003873 1636-1638 diseaseC0003873 denotes RA
20682662-12#144#146#diseaseC0024143 1648-1650 diseaseC0024143 denotes LN
56#60#gene1234132#134#diseaseC0003873 20682662-12#56#60#gene1234 20682662-12#132#134#diseaseC0003873 associated_with CCR5,RA
56#60#gene1234144#146#diseaseC0024143 20682662-12#56#60#gene1234 20682662-12#144#146#diseaseC0024143 associated_with CCR5,LN

biored-valid-deepseek-nr-ng

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-51 SequenceVariant denotes Δ32
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 264-267 SequenceVariant denotes Δ32
T9 285-289 GeneOrGeneProduct denotes CCR5
T10 485-488 SequenceVariant denotes Δ32
T11 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T12 595-597 DiseaseOrPhenotypicFeature denotes RA
T13 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T14 630-633 DiseaseOrPhenotypicFeature denotes SLE
T15 657-659 DiseaseOrPhenotypicFeature denotes LN
T16 723-726 ChemicalEntity denotes DNA
T17 744-746 DiseaseOrPhenotypicFeature denotes RA
T18 760-763 DiseaseOrPhenotypicFeature denotes SLE
T19 778-780 DiseaseOrPhenotypicFeature denotes LN
T20 839-843 GeneOrGeneProduct denotes CCR5
T21 844-847 SequenceVariant denotes Δ32

biored-valid

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-60 SequenceVariant denotes Δ32 deletion
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 234-246 DiseaseOrPhenotypicFeature denotes inflammation
T9 250-277 SequenceVariant denotes 32 base-pair (Δ32) deletion
T10 285-289 GeneOrGeneProduct denotes CCR5
T11 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases
T12 485-497 SequenceVariant denotes Δ32 deletion
T13 559-567 OrganismTaxon denotes patients
T14 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T15 595-597 DiseaseOrPhenotypicFeature denotes RA
T16 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T17 630-633 DiseaseOrPhenotypicFeature denotes SLE
T18 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis
T19 657-659 DiseaseOrPhenotypicFeature denotes LN
T20 744-746 DiseaseOrPhenotypicFeature denotes RA
T21 747-755 OrganismTaxon denotes patients
T22 760-763 DiseaseOrPhenotypicFeature denotes SLE
T23 764-772 OrganismTaxon denotes patients
T24 778-780 DiseaseOrPhenotypicFeature denotes LN
T25 781-789 OrganismTaxon denotes patients
T26 839-843 GeneOrGeneProduct denotes CCR5
T27 844-856 SequenceVariant denotes Δ32 deletion
T28 914-922 OrganismTaxon denotes patients
T29 1106-1114 OrganismTaxon denotes patients
T30 1159-1163 GeneOrGeneProduct denotes CCR5
T31 1164-1167 SequenceVariant denotes Δ32
T32 1169-1172 SequenceVariant denotes Δ32
T33 1173-1176 SequenceVariant denotes Δ32
T34 1178-1180 DiseaseOrPhenotypicFeature denotes RA
T35 1211-1214 DiseaseOrPhenotypicFeature denotes SLE
T36 1231-1233 DiseaseOrPhenotypicFeature denotes LN
T37 1313-1325 SequenceVariant denotes Δ32 deletion
T38 1346-1348 DiseaseOrPhenotypicFeature denotes LN
T39 1349-1357 OrganismTaxon denotes patients
T40 1440-1444 GeneOrGeneProduct denotes CCR5
T41 1476-1478 DiseaseOrPhenotypicFeature denotes RA
T42 1480-1483 DiseaseOrPhenotypicFeature denotes SLE
T43 1488-1490 DiseaseOrPhenotypicFeature denotes LN
T44 1533-1535 DiseaseOrPhenotypicFeature denotes LN
T45 1560-1564 GeneOrGeneProduct denotes CCR5
T46 1565-1577 SequenceVariant denotes Δ32 deletion
T47 1636-1638 DiseaseOrPhenotypicFeature denotes RA
T48 1640-1643 DiseaseOrPhenotypicFeature denotes SLE
T49 1648-1650 DiseaseOrPhenotypicFeature denotes LN
T50 1681-1693 SequenceVariant denotes Δ32 deletion

biored-valid-deepseek-nr-g

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-51 SequenceVariant denotes Δ32
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 264-267 SequenceVariant denotes Δ32
T9 290-294 GeneOrGeneProduct denotes gene
T10 485-488 SequenceVariant denotes Δ32
T11 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T12 595-597 DiseaseOrPhenotypicFeature denotes RA
T13 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T14 630-633 DiseaseOrPhenotypicFeature denotes SLE
T15 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis
T16 657-659 DiseaseOrPhenotypicFeature denotes LN
T17 744-746 DiseaseOrPhenotypicFeature denotes RA
T18 760-763 DiseaseOrPhenotypicFeature denotes SLE
T19 778-780 DiseaseOrPhenotypicFeature denotes LN
T20 839-843 GeneOrGeneProduct denotes CCR5
T21 844-847 SequenceVariant denotes Δ32

biored-valid-deepseek-r-ng

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-51 SequenceVariant denotes Δ32
T3 52-67 SequenceVariant denotes deletion status
T4 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T5 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T6 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T7 146-162 DiseaseOrPhenotypicFeature denotes disease severity
T8 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T9 201-205 GeneOrGeneProduct denotes CCR5
T10 250-277 SequenceVariant denotes 32 base-pair (Δ32) deletion
T11 285-294 GeneOrGeneProduct denotes CCR5 gene
T12 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases
T13 485-497 SequenceVariant denotes Δ32 deletion
T14 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T15 595-597 DiseaseOrPhenotypicFeature denotes RA
T16 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T17 630-633 DiseaseOrPhenotypicFeature denotes SLE
T18 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis
T19 657-659 DiseaseOrPhenotypicFeature denotes LN
T20 696-712 DiseaseOrPhenotypicFeature denotes disease severity
T21 723-726 ChemicalEntity denotes DNA
T22 744-746 DiseaseOrPhenotypicFeature denotes RA
T23 760-763 DiseaseOrPhenotypicFeature denotes SLE
T24 778-780 DiseaseOrPhenotypicFeature denotes LN
T25 839-856 SequenceVariant denotes CCR5 Δ32 deletion
T26 967-974 DiseaseOrPhenotypicFeature denotes disease
T27 975-983 DiseaseOrPhenotypicFeature denotes severity
T28 1159-1176 SequenceVariant denotes CCR5/Δ32, Δ32/Δ32
T29 1178-1180 DiseaseOrPhenotypicFeature denotes RA
T30 1211-1214 DiseaseOrPhenotypicFeature denotes SLE
T31 1231-1233 DiseaseOrPhenotypicFeature denotes LN
T32 1313-1325 SequenceVariant denotes Δ32 deletion
T33 1456-1472 DiseaseOrPhenotypicFeature denotes disease severity

biored-valid-deepseek-r-g

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-60 SequenceVariant denotes Δ32 deletion
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 595-597 DiseaseOrPhenotypicFeature denotes RA
T9 630-633 DiseaseOrPhenotypicFeature denotes SLE
T10 657-659 DiseaseOrPhenotypicFeature denotes LN

biored-valid-gemini-nr-ng

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-51 SequenceVariant denotes Δ32
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 264-267 SequenceVariant denotes Δ32
T9 285-289 GeneOrGeneProduct denotes CCR5
T10 485-488 SequenceVariant denotes Δ32
T11 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T12 595-597 DiseaseOrPhenotypicFeature denotes RA
T13 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T14 630-633 DiseaseOrPhenotypicFeature denotes SLE
T15 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis
T16 657-659 DiseaseOrPhenotypicFeature denotes LN
T17 744-746 DiseaseOrPhenotypicFeature denotes RA
T18 760-763 DiseaseOrPhenotypicFeature denotes SLE
T19 778-780 DiseaseOrPhenotypicFeature denotes LN
T20 839-843 GeneOrGeneProduct denotes CCR5
T21 844-847 SequenceVariant denotes Δ32
T22 1159-1163 GeneOrGeneProduct denotes CCR5
T23 1164-1167 SequenceVariant denotes Δ32
T24 1178-1180 DiseaseOrPhenotypicFeature denotes RA
T25 1211-1214 DiseaseOrPhenotypicFeature denotes SLE
T26 1231-1233 DiseaseOrPhenotypicFeature denotes LN

biored-valid-gemini-r-ng

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-60 SequenceVariant denotes Δ32 deletion
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 234-246 DiseaseOrPhenotypicFeature denotes inflammation
T9 250-277 SequenceVariant denotes 32 base-pair (Δ32) deletion
T10 285-289 GeneOrGeneProduct denotes CCR5
T11 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases
T12 485-497 SequenceVariant denotes Δ32 deletion
T13 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T14 595-597 DiseaseOrPhenotypicFeature denotes RA
T15 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T16 630-633 DiseaseOrPhenotypicFeature denotes SLE
T17 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis
T18 657-659 DiseaseOrPhenotypicFeature denotes LN
T19 723-726 ChemicalEntity denotes DNA
T20 744-746 DiseaseOrPhenotypicFeature denotes RA
T21 760-763 DiseaseOrPhenotypicFeature denotes SLE
T22 778-780 DiseaseOrPhenotypicFeature denotes LN
T23 839-843 GeneOrGeneProduct denotes CCR5
T24 844-847 SequenceVariant denotes Δ32
T25 1159-1163 GeneOrGeneProduct denotes CCR5
T26 1178-1180 DiseaseOrPhenotypicFeature denotes RA
T27 1211-1214 DiseaseOrPhenotypicFeature denotes SLE
T28 1231-1233 DiseaseOrPhenotypicFeature denotes LN
T29 1313-1332 SequenceVariant denotes Δ32 deletion allele

biored-valid-gemini-r-g

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-60 SequenceVariant denotes Δ32 deletion
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-206 GeneOrGeneProduct denotes C-C chemokine receptor 5 (CCR5)
T7 234-246 DiseaseOrPhenotypicFeature denotes inflammation
T8 264-267 SequenceVariant denotes Δ32
T9 285-289 GeneOrGeneProduct denotes CCR5
T10 485-497 SequenceVariant denotes Δ32 deletion
T11 573-598 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis (RA)
T12 600-634 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus (SLE)
T13 640-660 DiseaseOrPhenotypicFeature denotes lupus nephritis (LN)
T14 744-746 DiseaseOrPhenotypicFeature denotes RA
T15 760-763 DiseaseOrPhenotypicFeature denotes SLE
T16 778-780 DiseaseOrPhenotypicFeature denotes LN
T17 839-843 GeneOrGeneProduct denotes CCR5
T18 844-856 SequenceVariant denotes Δ32 deletion
T19 1159-1167 SequenceVariant denotes CCR5/Δ32
T20 1169-1176 SequenceVariant denotes Δ32/Δ32
T21 1178-1180 DiseaseOrPhenotypicFeature denotes RA
T22 1211-1214 DiseaseOrPhenotypicFeature denotes SLE
T23 1231-1233 DiseaseOrPhenotypicFeature denotes LN
T24 1313-1332 SequenceVariant denotes Δ32 deletion allele

biored-valid-gpt-nr-ng

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-60 SequenceVariant denotes Δ32 deletion
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T5 146-162 DiseaseOrPhenotypicFeature denotes disease severity
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 234-246 DiseaseOrPhenotypicFeature denotes inflammation
T9 264-267 SequenceVariant denotes Δ32
T10 285-289 GeneOrGeneProduct denotes CCR5
T11 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases
T12 485-497 SequenceVariant denotes Δ32 deletion
T13 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T14 595-597 DiseaseOrPhenotypicFeature denotes RA
T15 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T16 630-633 DiseaseOrPhenotypicFeature denotes SLE
T17 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis
T18 657-659 DiseaseOrPhenotypicFeature denotes LN
T19 696-712 DiseaseOrPhenotypicFeature denotes disease severity
T20 723-726 ChemicalEntity denotes DNA
T21 744-746 DiseaseOrPhenotypicFeature denotes RA
T22 760-763 DiseaseOrPhenotypicFeature denotes SLE
T23 778-780 DiseaseOrPhenotypicFeature denotes LN
T24 839-843 GeneOrGeneProduct denotes CCR5
T25 844-856 SequenceVariant denotes Δ32 deletion
T26 967-983 DiseaseOrPhenotypicFeature denotes disease severity
T27 1169-1176 SequenceVariant denotes Δ32/Δ32
T28 1178-1180 DiseaseOrPhenotypicFeature denotes RA
T29 1211-1214 DiseaseOrPhenotypicFeature denotes SLE
T30 1231-1233 DiseaseOrPhenotypicFeature denotes LN
T31 1313-1325 SequenceVariant denotes Δ32 deletion
T32 1346-1348 DiseaseOrPhenotypicFeature denotes LN
T33 1440-1444 GeneOrGeneProduct denotes CCR5
T34 1456-1472 DiseaseOrPhenotypicFeature denotes disease severity
T35 1476-1478 DiseaseOrPhenotypicFeature denotes RA
T36 1480-1483 DiseaseOrPhenotypicFeature denotes SLE
T37 1488-1490 DiseaseOrPhenotypicFeature denotes LN
T38 1560-1564 GeneOrGeneProduct denotes CCR5
T39 1565-1577 SequenceVariant denotes Δ32 deletion
T40 1636-1638 DiseaseOrPhenotypicFeature denotes RA
T41 1640-1643 DiseaseOrPhenotypicFeature denotes SLE
T42 1648-1650 DiseaseOrPhenotypicFeature denotes LN
T43 1681-1693 SequenceVariant denotes Δ32 deletion
T44 1697-1713 DiseaseOrPhenotypicFeature denotes disease severity

biored-valid-gpt-r-g

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-60 SequenceVariant denotes Δ32 deletion
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 234-246 DiseaseOrPhenotypicFeature denotes inflammation
T9 264-267 SequenceVariant denotes Δ32
T10 285-294 GeneOrGeneProduct denotes CCR5 gene
T11 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases
T12 485-497 SequenceVariant denotes Δ32 deletion
T13 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T14 595-597 DiseaseOrPhenotypicFeature denotes RA
T15 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T16 630-633 DiseaseOrPhenotypicFeature denotes SLE
T17 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis
T18 657-659 DiseaseOrPhenotypicFeature denotes LN
T19 744-746 DiseaseOrPhenotypicFeature denotes RA
T20 760-763 DiseaseOrPhenotypicFeature denotes SLE
T21 778-780 DiseaseOrPhenotypicFeature denotes LN
T22 839-843 GeneOrGeneProduct denotes CCR5
T23 844-856 SequenceVariant denotes Δ32 deletion
T24 1159-1163 GeneOrGeneProduct denotes CCR5
T25 1164-1167 SequenceVariant denotes Δ32
T26 1178-1180 DiseaseOrPhenotypicFeature denotes RA
T27 1211-1214 DiseaseOrPhenotypicFeature denotes SLE
T28 1231-1233 DiseaseOrPhenotypicFeature denotes LN
T29 1313-1325 SequenceVariant denotes Δ32 deletion
T30 1346-1348 DiseaseOrPhenotypicFeature denotes LN
T31 1440-1444 GeneOrGeneProduct denotes CCR5
T32 1476-1478 DiseaseOrPhenotypicFeature denotes RA
T33 1480-1483 DiseaseOrPhenotypicFeature denotes SLE
T34 1488-1490 DiseaseOrPhenotypicFeature denotes LN
T35 1560-1564 GeneOrGeneProduct denotes CCR5
T36 1565-1577 SequenceVariant denotes Δ32 deletion
T37 1636-1638 DiseaseOrPhenotypicFeature denotes RA
T38 1640-1643 DiseaseOrPhenotypicFeature denotes SLE
T39 1648-1650 DiseaseOrPhenotypicFeature denotes LN
T40 1681-1693 SequenceVariant denotes Δ32 deletion

biored-valid-gpt-nr-g

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-60 SequenceVariant denotes Δ32 deletion
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 250-277 SequenceVariant denotes 32 base-pair (Δ32) deletion
T9 285-289 GeneOrGeneProduct denotes CCR5
T10 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T11 595-597 DiseaseOrPhenotypicFeature denotes RA
T12 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T13 630-633 DiseaseOrPhenotypicFeature denotes SLE
T14 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis
T15 657-659 DiseaseOrPhenotypicFeature denotes LN
T16 744-746 DiseaseOrPhenotypicFeature denotes RA
T17 760-763 DiseaseOrPhenotypicFeature denotes SLE
T18 778-780 DiseaseOrPhenotypicFeature denotes LN
T19 839-856 SequenceVariant denotes CCR5 Δ32 deletion
T20 1159-1167 SequenceVariant denotes CCR5/Δ32
T21 1169-1176 SequenceVariant denotes Δ32/Δ32
T22 1178-1180 DiseaseOrPhenotypicFeature denotes RA
T23 1211-1214 DiseaseOrPhenotypicFeature denotes SLE
T24 1231-1233 DiseaseOrPhenotypicFeature denotes LN
T25 1313-1325 SequenceVariant denotes Δ32 deletion
T26 1346-1348 DiseaseOrPhenotypicFeature denotes LN
T27 1440-1444 GeneOrGeneProduct denotes CCR5
T28 1476-1478 DiseaseOrPhenotypicFeature denotes RA
T29 1480-1483 DiseaseOrPhenotypicFeature denotes SLE
T30 1488-1490 DiseaseOrPhenotypicFeature denotes LN
T31 1560-1577 SequenceVariant denotes CCR5 Δ32 deletion
T32 1636-1638 DiseaseOrPhenotypicFeature denotes RA
T33 1640-1643 DiseaseOrPhenotypicFeature denotes SLE
T34 1648-1650 DiseaseOrPhenotypicFeature denotes LN
T35 1681-1693 SequenceVariant denotes Δ32 deletion

biored-valid-gpt-r-ng

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-60 SequenceVariant denotes Δ32 deletion
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 146-162 DiseaseOrPhenotypicFeature denotes disease severity
T7 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T8 201-205 GeneOrGeneProduct denotes CCR5
T9 250-277 SequenceVariant denotes 32 base-pair (Δ32) deletion
T10 285-294 GeneOrGeneProduct denotes CCR5 gene
T11 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases
T12 485-497 SequenceVariant denotes Δ32 deletion
T13 517-539 DiseaseOrPhenotypicFeature denotes disease susceptibility
T14 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T15 595-597 DiseaseOrPhenotypicFeature denotes RA
T16 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T17 630-633 DiseaseOrPhenotypicFeature denotes SLE
T18 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis
T19 657-659 DiseaseOrPhenotypicFeature denotes LN
T20 696-712 DiseaseOrPhenotypicFeature denotes disease severity
T21 723-726 ChemicalEntity denotes DNA
T22 744-746 DiseaseOrPhenotypicFeature denotes RA
T23 760-763 DiseaseOrPhenotypicFeature denotes SLE
T24 778-780 DiseaseOrPhenotypicFeature denotes LN
T25 839-843 GeneOrGeneProduct denotes CCR5
T26 844-856 SequenceVariant denotes Δ32 deletion
T27 1159-1167 SequenceVariant denotes CCR5/Δ32
T28 1169-1176 SequenceVariant denotes Δ32/Δ32
T29 1178-1180 DiseaseOrPhenotypicFeature denotes RA
T30 1211-1214 DiseaseOrPhenotypicFeature denotes SLE
T31 1231-1233 DiseaseOrPhenotypicFeature denotes LN
T32 1313-1325 SequenceVariant denotes Δ32 deletion
T33 1346-1348 DiseaseOrPhenotypicFeature denotes LN
T34 1440-1444 GeneOrGeneProduct denotes CCR5
T35 1456-1472 DiseaseOrPhenotypicFeature denotes disease severity
T36 1476-1478 DiseaseOrPhenotypicFeature denotes RA
T37 1480-1483 DiseaseOrPhenotypicFeature denotes SLE
T38 1488-1490 DiseaseOrPhenotypicFeature denotes LN
T39 1560-1564 GeneOrGeneProduct denotes CCR5
T40 1565-1577 SequenceVariant denotes Δ32 deletion
T41 1600-1622 DiseaseOrPhenotypicFeature denotes disease susceptibility
T42 1636-1638 DiseaseOrPhenotypicFeature denotes RA
T43 1640-1643 DiseaseOrPhenotypicFeature denotes SLE
T44 1648-1650 DiseaseOrPhenotypicFeature denotes LN
T45 1681-1693 SequenceVariant denotes Δ32 deletion
T46 1697-1713 DiseaseOrPhenotypicFeature denotes disease severity

biored-valid-gemini-nr-g

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-51 SequenceVariant denotes Δ32
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 264-267 SequenceVariant denotes Δ32
T9 285-289 GeneOrGeneProduct denotes CCR5
T10 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases
T11 485-488 SequenceVariant denotes Δ32
T12 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T13 595-597 DiseaseOrPhenotypicFeature denotes RA
T14 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T15 630-633 DiseaseOrPhenotypicFeature denotes SLE
T16 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis
T17 657-659 DiseaseOrPhenotypicFeature denotes LN
T18 744-746 DiseaseOrPhenotypicFeature denotes RA
T19 760-763 DiseaseOrPhenotypicFeature denotes SLE
T20 778-780 DiseaseOrPhenotypicFeature denotes LN
T21 839-843 GeneOrGeneProduct denotes CCR5
T22 844-847 SequenceVariant denotes Δ32
T23 1159-1163 GeneOrGeneProduct denotes CCR5
T24 1164-1167 SequenceVariant denotes Δ32
T25 1178-1180 DiseaseOrPhenotypicFeature denotes RA
T26 1211-1214 DiseaseOrPhenotypicFeature denotes SLE
T27 1231-1233 DiseaseOrPhenotypicFeature denotes LN
T28 1313-1316 SequenceVariant denotes Δ32

biored-valid-gpt-r-m

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-60 SequenceVariant denotes Δ32 deletion
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 234-246 DiseaseOrPhenotypicFeature denotes inflammation
T9 250-277 SequenceVariant denotes 32 base-pair (Δ32) deletion
T10 285-289 GeneOrGeneProduct denotes CCR5
T11 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases
T12 485-497 SequenceVariant denotes Δ32 deletion
T13 559-567 OrganismTaxon denotes patients
T14 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T15 595-597 DiseaseOrPhenotypicFeature denotes RA
T16 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T17 630-633 DiseaseOrPhenotypicFeature denotes SLE
T18 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis
T19 657-659 DiseaseOrPhenotypicFeature denotes LN
T20 744-746 DiseaseOrPhenotypicFeature denotes RA
T21 747-755 OrganismTaxon denotes patients
T22 760-763 DiseaseOrPhenotypicFeature denotes SLE
T23 778-780 DiseaseOrPhenotypicFeature denotes LN
T24 807-815 OrganismTaxon denotes controls
T25 839-843 GeneOrGeneProduct denotes CCR5
T26 844-856 SequenceVariant denotes Δ32 deletion
T27 914-922 OrganismTaxon denotes patients
T28 927-935 OrganismTaxon denotes controls
T29 1106-1114 OrganismTaxon denotes patients
T30 1149-1157 OrganismTaxon denotes controls
T31 1159-1163 GeneOrGeneProduct denotes CCR5
T32 1164-1167 SequenceVariant denotes Δ32
T33 1178-1180 DiseaseOrPhenotypicFeature denotes RA
T34 1211-1214 DiseaseOrPhenotypicFeature denotes SLE
T35 1231-1233 DiseaseOrPhenotypicFeature denotes LN
T36 1250-1258 OrganismTaxon denotes controls
T37 1313-1325 SequenceVariant denotes Δ32 deletion
T38 1346-1348 DiseaseOrPhenotypicFeature denotes LN
T39 1349-1357 OrganismTaxon denotes patients
T40 1370-1378 OrganismTaxon denotes controls
T41 1440-1444 GeneOrGeneProduct denotes CCR5
T42 1476-1478 DiseaseOrPhenotypicFeature denotes RA
T43 1480-1483 DiseaseOrPhenotypicFeature denotes SLE
T44 1488-1490 DiseaseOrPhenotypicFeature denotes LN
T45 1560-1564 GeneOrGeneProduct denotes CCR5
T46 1565-1577 SequenceVariant denotes Δ32 deletion
T47 1636-1638 DiseaseOrPhenotypicFeature denotes RA
T48 1640-1643 DiseaseOrPhenotypicFeature denotes SLE
T49 1648-1650 DiseaseOrPhenotypicFeature denotes LN
T50 1681-1693 SequenceVariant denotes Δ32 deletion

biored-valid-gemini-r-m

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-60 SequenceVariant denotes Δ32 deletion
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 234-246 DiseaseOrPhenotypicFeature denotes inflammation
T9 264-267 SequenceVariant denotes Δ32
T10 269-277 SequenceVariant denotes deletion
T11 285-289 GeneOrGeneProduct denotes CCR5
T12 335-343 SequenceVariant denotes deletion
T13 436-455 DiseaseOrPhenotypicFeature denotes autoimmune diseases
T14 485-497 SequenceVariant denotes Δ32 deletion
T15 559-567 OrganismTaxon denotes patients
T16 573-593 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T17 595-597 DiseaseOrPhenotypicFeature denotes RA
T18 600-628 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T19 630-633 DiseaseOrPhenotypicFeature denotes SLE
T20 640-655 DiseaseOrPhenotypicFeature denotes lupus nephritis
T21 657-659 DiseaseOrPhenotypicFeature denotes LN
T22 723-726 ChemicalEntity denotes DNA
T23 744-746 DiseaseOrPhenotypicFeature denotes RA
T24 747-755 OrganismTaxon denotes patients
T25 760-763 DiseaseOrPhenotypicFeature denotes SLE
T26 778-780 DiseaseOrPhenotypicFeature denotes LN
T27 807-815 OrganismTaxon denotes controls
T28 839-843 GeneOrGeneProduct denotes CCR5
T29 844-856 SequenceVariant denotes Δ32 deletion
T30 914-922 OrganismTaxon denotes patients
T31 927-935 OrganismTaxon denotes controls
T32 1106-1114 OrganismTaxon denotes patients
T33 1149-1157 OrganismTaxon denotes controls
T34 1159-1163 GeneOrGeneProduct denotes CCR5
T35 1164-1167 SequenceVariant denotes Δ32
T36 1178-1180 DiseaseOrPhenotypicFeature denotes RA
T37 1211-1214 DiseaseOrPhenotypicFeature denotes SLE
T38 1231-1233 DiseaseOrPhenotypicFeature denotes LN
T39 1250-1258 OrganismTaxon denotes controls
T40 1313-1325 SequenceVariant denotes Δ32 deletion
T41 1346-1348 DiseaseOrPhenotypicFeature denotes LN
T42 1349-1357 OrganismTaxon denotes patients
T43 1440-1444 GeneOrGeneProduct denotes CCR5
T44 1476-1478 DiseaseOrPhenotypicFeature denotes RA
T45 1480-1483 DiseaseOrPhenotypicFeature denotes SLE
T46 1488-1490 DiseaseOrPhenotypicFeature denotes LN
T47 1533-1535 DiseaseOrPhenotypicFeature denotes LN
T48 1565-1577 SequenceVariant denotes Δ32 deletion

biored-valid-deepseek-r-m

Id Subject Object Predicate Lexical cue
T1 23-47 GeneOrGeneProduct denotes C-C chemokine receptor 5
T2 48-60 SequenceVariant denotes Δ32 deletion
T3 73-93 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis
T4 95-123 DiseaseOrPhenotypicFeature denotes systemic lupus erythematosus
T5 125-140 DiseaseOrPhenotypicFeature denotes lupus nephritis
T6 175-199 GeneOrGeneProduct denotes C-C chemokine receptor 5
T7 201-205 GeneOrGeneProduct denotes CCR5
T8 264-267 SequenceVariant denotes Δ32
T9 285-294 GeneOrGeneProduct denotes CCR5 gene
T10 485-497 SequenceVariant denotes Δ32 deletion
T11 595-597 DiseaseOrPhenotypicFeature denotes RA
T12 630-633 DiseaseOrPhenotypicFeature denotes SLE
T13 657-659 DiseaseOrPhenotypicFeature denotes LN
T14 839-843 GeneOrGeneProduct denotes CCR5
T15 844-856 SequenceVariant denotes Δ32 deletion