PubMed:20652530
Annnotations
OryzaGP_2021_v2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 87-92 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T2 | 149-153 | http://identifiers.org/oryzabase.gene/863 | denotes | Sub1 |
T3 | 323-328 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T4 | 333-338 | http://identifiers.org/oryzabase.gene/7119 | denotes | SUB1C |
T5 | 395-399 | http://identifiers.org/oryzabase.gene/863 | denotes | Sub1 |
T6 | 468-473 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T7 | 502-507 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T8 | 589-593 | http://identifiers.org/oryzabase.gene/863 | denotes | Sub1 |
T9 | 605-610 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T10 | 613-618 | http://identifiers.org/oryzabase.gene/7119 | denotes | SUB1C |
T11 | 658-663 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T12 | 722-727 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T13 | 806-811 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T14 | 841-843 | http://identifiers.org/oryzabase.gene/319 | denotes | RT |
T15 | 1011-1016 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T16 | 1124-1129 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T17 | 1374-1379 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T18 | 1501-1506 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T19 | 1723-1728 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T58391 | 333-338 | http://identifiers.org/rapdb.locus/Os09g0286600 | denotes | SUB1C |
T71925 | 613-618 | http://identifiers.org/rapdb.locus/Os09g0286600 | denotes | SUB1C |
OryzaGP_2021
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 60-81 | http://identifiers.org/oryzabase.gene/2474 | denotes | submergence-tolerance |
T2 | 87-92 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T3 | 149-153 | http://identifiers.org/oryzabase.gene/863 | denotes | Sub1 |
T4 | 323-328 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T5 | 333-338 | http://identifiers.org/oryzabase.gene/7119 | denotes | SUB1C |
T6 | 395-399 | http://identifiers.org/oryzabase.gene/863 | denotes | Sub1 |
T7 | 468-473 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T8 | 502-507 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T9 | 589-593 | http://identifiers.org/oryzabase.gene/863 | denotes | Sub1 |
T10 | 605-610 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T11 | 613-618 | http://identifiers.org/oryzabase.gene/7119 | denotes | SUB1C |
T12 | 658-663 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T13 | 722-727 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T14 | 806-811 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T15 | 841-843 | http://identifiers.org/oryzabase.gene/319 | denotes | RT |
T16 | 1011-1016 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T17 | 1124-1129 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T18 | 1374-1379 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T19 | 1501-1506 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T20 | 1723-1728 | http://identifiers.org/oryzabase.gene/7115 | denotes | SUB1A |
T30474 | 149-153 | http://identifiers.org/ricegap/LOC_Os01g17160 | denotes | Sub1 |
T65247 | 333-338 | http://identifiers.org/ricegap/LOC_Os09g11460 | denotes | SUB1C |
T87643 | 395-399 | http://identifiers.org/ricegap/LOC_Os01g17160 | denotes | Sub1 |
T30689 | 589-593 | http://identifiers.org/ricegap/LOC_Os01g17160 | denotes | Sub1 |
T60026 | 613-618 | http://identifiers.org/ricegap/LOC_Os09g11460 | denotes | SUB1C |
T21978 | 149-153 | http://identifiers.org/rapdb.locus/Os01g0279000 | denotes | Sub1 |
T79720 | 333-338 | http://identifiers.org/rapdb.locus/Os09g0286600 | denotes | SUB1C |
T94532 | 395-399 | http://identifiers.org/rapdb.locus/Os01g0279000 | denotes | Sub1 |
T79616 | 589-593 | http://identifiers.org/rapdb.locus/Os01g0279000 | denotes | Sub1 |
T47597 | 613-618 | http://identifiers.org/rapdb.locus/Os09g0286600 | denotes | SUB1C |
T31685 | 333-338 | http://identifiers.org/uniprot/B1PI84 | denotes | SUB1C |
T30124 | 613-618 | http://identifiers.org/uniprot/B1PI84 | denotes | SUB1C |
M_0 | 87-92 | hunflair:NA:Gene | denotes | SUB1A |
M_1 | 323-328 | hunflair:NA:Gene | denotes | SUB1A |
M_2 | 468-473 | hunflair:NA:Gene | denotes | SUB1A |
M_3 | 502-507 | hunflair:NA:Gene | denotes | SUB1A |
M_4 | 605-610 | hunflair:NA:Gene | denotes | SUB1A |
M_5 | 658-663 | hunflair:NA:Gene | denotes | SUB1A |
M_6 | 722-727 | hunflair:NA:Gene | denotes | SUB1A |
M_7 | 806-811 | hunflair:NA:Gene | denotes | SUB1A |
M_8 | 1011-1016 | hunflair:NA:Gene | denotes | SUB1A |
M_9 | 1124-1129 | hunflair:NA:Gene | denotes | SUB1A |
M_10 | 1374-1379 | hunflair:NA:Gene | denotes | SUB1A |
M_11 | 1501-1506 | hunflair:NA:Gene | denotes | SUB1A |
M_12 | 1723-1728 | hunflair:NA:Gene | denotes | SUB1A |
M_13 | 55-59 | hunflair:NA:Species | denotes | rice |
M_14 | 104-108 | hunflair:NA:Species | denotes | rice |
M_15 | 1673-1677 | hunflair:NA:Species | denotes | rice |
M_16 | 502-509 | hunflair:NA:Gene | denotes | SUB1A-2 |
M_17 | 722-729 | hunflair:NA:Gene | denotes | SUB1A-2 |
M_18 | 1374-1381 | hunflair:NA:Gene | denotes | SUB1A-2 |
M_19 | 605-612 | hunflair:NA:Gene | denotes | SUB1A-1 |
M_20 | 806-813 | hunflair:NA:Gene | denotes | SUB1A-1 |
M_21 | 1501-1508 | hunflair:NA:Gene | denotes | SUB1A-1 |
M_22 | 1458-1461 | hunflair:NA:Gene | denotes | GUS |
M_23 | 1553-1556 | hunflair:NA:Gene | denotes | GUS |
M_24 | 333-338 | hunflair:NA:Gene | denotes | SUB1C |
M_25 | 613-618 | hunflair:NA:Gene | denotes | SUB1C |
M_26 | 613-620 | hunflair:NA:Gene | denotes | SUB1C-1 |
M_27 | 149-153 | hunflair:NA:Gene | denotes | Sub1 |
M_28 | 395-399 | hunflair:NA:Gene | denotes | Sub1 |
M_29 | 589-593 | hunflair:NA:Gene | denotes | Sub1 |
21k_plant_trait_mention
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
M_0 | 1592-1598 | funRiceGene:331 | denotes | sheath |
M_1 | 163-172 | funRiceGene:214 | denotes | tolerance |
M_2 | 1186-1195 | funRiceGene:214 | denotes | tolerance |
M_3 | 1319-1328 | funRiceGene:214 | denotes | tolerance |
M_4 | 958-970 | xzyao:1080 | denotes | leaf samples |
M_5 | 1587-1598 | xzyao:3283 | denotes | leaf sheath |
M_6 | 1458-1470 | xzyao:12335 | denotes | GUS reporter |
M_7 | 958-962 | PO:0025034, funRiceGene:469 | denotes | leaf |
M_8 | 1587-1591 | PO:0025034, funRiceGene:469 | denotes | leaf |
M_9 | 1610-1614 | PO:0025034, funRiceGene:469 | denotes | leaf |
M_10 | 1744-1748 | PO:0025034, funRiceGene:469 | denotes | leaf |
M_11 | 267-276 | PECO:0007353 | denotes | germplasm |
M_12 | 1610-1621 | PO:0006012 | denotes | leaf collar |
M_13 | 1744-1759 | xzyao:17594 | denotes | leaf elongation |
M_14 | 703-712 | xzyao:5042 | denotes | James Wee |
M_15 | 1587-1598 | PO:0020104, xzyao:16507 | denotes | leaf sheath |
M_16 | 134-145 | funRiceGene:101 | denotes | Submergence |
M_17 | 176-187 | funRiceGene:101 | denotes | submergence |
M_18 | 613-620 | hunflair:NA:Gene | denotes | SUB1C-1 |
M_19 | 1458-1461 | hunflair:NA:Gene | denotes | GUS |
M_20 | 1553-1556 | hunflair:NA:Gene | denotes | GUS |
M_21 | 502-509 | hunflair:NA:Gene | denotes | SUB1A-2 |
M_22 | 722-729 | hunflair:NA:Gene | denotes | SUB1A-2 |
M_23 | 1374-1381 | hunflair:NA:Gene | denotes | SUB1A-2 |
M_24 | 55-59 | hunflair:NA:Species | denotes | rice |
M_25 | 104-108 | hunflair:NA:Species | denotes | rice |
M_26 | 1673-1677 | hunflair:NA:Species | denotes | rice |
M_27 | 149-153 | hunflair:NA:Gene | denotes | Sub1 |
M_28 | 395-399 | hunflair:NA:Gene | denotes | Sub1 |
M_29 | 589-593 | hunflair:NA:Gene | denotes | Sub1 |
M_30 | 605-612 | hunflair:NA:Gene | denotes | SUB1A-1 |
M_31 | 806-813 | hunflair:NA:Gene | denotes | SUB1A-1 |
M_32 | 1501-1508 | hunflair:NA:Gene | denotes | SUB1A-1 |
M_33 | 333-338 | hunflair:NA:Gene | denotes | SUB1C |
M_34 | 613-618 | hunflair:NA:Gene | denotes | SUB1C |
M_35 | 87-92 | hunflair:NA:Gene | denotes | SUB1A |
M_36 | 323-328 | hunflair:NA:Gene | denotes | SUB1A |
M_37 | 468-473 | hunflair:NA:Gene | denotes | SUB1A |
M_38 | 502-507 | hunflair:NA:Gene | denotes | SUB1A |
M_39 | 605-610 | hunflair:NA:Gene | denotes | SUB1A |
M_40 | 658-663 | hunflair:NA:Gene | denotes | SUB1A |
M_41 | 722-727 | hunflair:NA:Gene | denotes | SUB1A |
M_42 | 806-811 | hunflair:NA:Gene | denotes | SUB1A |
M_43 | 1011-1016 | hunflair:NA:Gene | denotes | SUB1A |
M_44 | 1124-1129 | hunflair:NA:Gene | denotes | SUB1A |
M_45 | 1374-1379 | hunflair:NA:Gene | denotes | SUB1A |
M_46 | 1501-1506 | hunflair:NA:Gene | denotes | SUB1A |
M_47 | 1723-1728 | hunflair:NA:Gene | denotes | SUB1A |
M_48 | 55-59 | pubtator:4530:Species | denotes | rice |
M_49 | 104-108 | pubtator:4530:Species | denotes | rice |
M_50 | 1673-1677 | pubtator:4530:Species | denotes | rice |
OryzaGP_2022
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 60-81 | http://identifiers.org/oryzabase.gene/2474 | denotes | submergence-tolerance |
T2 | 146-147 | http://identifiers.org/oryzabase.gene/11216 | denotes | 1 |
T3 | 611-612 | http://identifiers.org/oryzabase.gene/11216 | denotes | 1 |
T4 | 619-620 | http://identifiers.org/oryzabase.gene/11216 | denotes | 1 |
T5 | 812-813 | http://identifiers.org/oryzabase.gene/11216 | denotes | 1 |
T6 | 1507-1508 | http://identifiers.org/oryzabase.gene/11216 | denotes | 1 |
pqqtest_sentence
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
M_0 | 219-232 | cand:PECO:0007125-genetic environment | denotes | novel sources |
M_1 | 219-232 | cand:PPO:0002300-plant structures present | denotes | novel sources |
M_2 | 219-232 | cand:WTO:0000096-nutrient use efficiency | denotes | novel sources |
M_3 | 219-232 | cand:PO:0025571-multi-tissue plant structure development stage | denotes | novel sources |
M_4 | 219-232 | cand:PECO:0007043-non-mineral nutrient exposure | denotes | novel sources |
M_5 | 219-232 | cand:PECO:0001044-limited carbon exposure | denotes | novel sources |
M_6 | 219-232 | cand:TO:0000059-node color | denotes | novel sources |
M_7 | 219-232 | cand:PO:0025118-anther pore | denotes | novel sources |
M_8 | 219-232 | cand:PPO:0000003-lower percent | denotes | novel sources |
M_9 | 219-232 | cand:WTO:0000203-water stress | denotes | novel sources |
M_10 | 219-232 | cand:PO:0025055-tuber cortex | denotes | novel sources |
M_11 | 1744-1759 | cand:TO:0000360-leaf elongation rate | denotes | leaf elongation |
M_12 | 1744-1759 | cand:PO:0025361-leaf tendril | denotes | leaf elongation |
M_13 | 1744-1759 | cand:PO:0009023-leaf axil | denotes | leaf elongation |
M_14 | 1744-1759 | cand:PO:0025259-leaf procambium | denotes | leaf elongation |
M_15 | 1744-1759 | cand:TO:0000135-leaf length | denotes | leaf elongation |
M_16 | 1744-1759 | cand:PO:0020139-leaf midvein | denotes | leaf elongation |
M_17 | 1744-1759 | cand:TO:0000541-leaf position | denotes | leaf elongation |
M_18 | 1744-1759 | cand:funRiceGene:227-cell elongation | denotes | leaf elongation |
M_19 | 1744-1759 | cand:TO:0006036-stem elongation | denotes | leaf elongation |
M_20 | 1744-1759 | cand:funRiceGene:460-root elongation | denotes | leaf elongation |
M_21 | 333-338 | GeneID:RAPID:Os09g0286600MSUID:LOC_Os09g11460 | denotes | SUB1C |
M_22 | 1723-1728 | GeneID:NA | denotes | SUB1A |
T95426 | 1610-1621 | PO:0006012 | denotes | leaf collar |
T53050 | 1587-1598 | PO:0020104, xzyao:22679 | denotes | leaf sheath |
T55138 | 267-276 | PECO:0007353 | denotes | germplasm |
T49637 | 1553-1567 | xzyao:9707 | denotes | GUS expression |
T96256 | 1544-1567 | xzyao:12912 | denotes | specific GUS expression |
T69370 | 1053-1098 | xzyao:28658 | denotes | Temporal and spatial gene expression analyses |
T52264 | 958-962 | PO:0025034, funRiceGene:469 | denotes | leaf |
T43378 | 1587-1591 | PO:0025034, funRiceGene:469 | denotes | leaf |
T84062 | 1610-1614 | PO:0025034, funRiceGene:469 | denotes | leaf |
T65290 | 1744-1748 | PO:0025034, funRiceGene:469 | denotes | leaf |
T91541 | 1673-1684 | xzyao:35993 | denotes | rice leaves |
T65369 | 695-712 | xzyao:38788 | denotes | variety James Wee |
T57200 | 122-127 | WTO:0000006 | denotes | trait |
T65476 | 1482-1493 | xzyao:15868 | denotes | the control |
T88089 | 958-970 | xzyao:17468 | denotes | leaf samples |
T41216 | 1744-1759 | xzyao:27809 | denotes | leaf elongation |
T293 | 60-71 | funRiceGene:101 | denotes | submergence |
T28635 | 134-145 | funRiceGene:101 | denotes | Submergence |
T58574 | 176-187 | funRiceGene:101 | denotes | submergence |
T12767 | 1766-1777 | funRiceGene:101 | denotes | submergence |
T40042 | 844-856 | xzyao:5910 | denotes | PCR analyses |
T53631 | 1592-1598 | funRiceGene:331 | denotes | sheath |
T52899 | 1351-1366 | xzyao:17753 | denotes | high expression |
M_23 | 72-81 | funRiceGene:214 | denotes | tolerance |
M_24 | 163-172 | funRiceGene:214 | denotes | tolerance |
M_25 | 236-245 | funRiceGene:214 | denotes | tolerance |
M_26 | 1042-1051 | funRiceGene:214 | denotes | tolerance |
M_27 | 1186-1195 | funRiceGene:214 | denotes | tolerance |
M_28 | 1319-1328 | funRiceGene:214 | denotes | tolerance |
M_29 | 1458-1461 | hunflair:NA:Gene | denotes | GUS |
M_30 | 1553-1556 | hunflair:NA:Gene | denotes | GUS |
M_31 | 613-620 | hunflair:NA:Gene | denotes | SUB1C-1 |
M_32 | 605-612 | hunflair:NA:Gene | denotes | SUB1A-1 |
M_33 | 806-813 | hunflair:NA:Gene | denotes | SUB1A-1 |
M_34 | 1501-1508 | hunflair:NA:Gene | denotes | SUB1A-1 |
M_35 | 55-59 | hunflair:NA:Species | denotes | rice |
M_36 | 104-108 | hunflair:NA:Species | denotes | rice |
M_37 | 1673-1677 | hunflair:NA:Species | denotes | rice |
M_38 | 333-338 | hunflair:NA:Gene | denotes | SUB1C |
M_39 | 613-618 | hunflair:NA:Gene | denotes | SUB1C |
M_40 | 502-509 | hunflair:NA:Gene | denotes | SUB1A-2 |
M_41 | 722-729 | hunflair:NA:Gene | denotes | SUB1A-2 |
M_42 | 1374-1381 | hunflair:NA:Gene | denotes | SUB1A-2 |
M_43 | 87-92 | hunflair:NA:Gene | denotes | SUB1A |
M_44 | 323-328 | hunflair:NA:Gene | denotes | SUB1A |
M_45 | 468-473 | hunflair:NA:Gene | denotes | SUB1A |
M_46 | 502-507 | hunflair:NA:Gene | denotes | SUB1A |
M_47 | 605-610 | hunflair:NA:Gene | denotes | SUB1A |
M_48 | 658-663 | hunflair:NA:Gene | denotes | SUB1A |
M_49 | 722-727 | hunflair:NA:Gene | denotes | SUB1A |
M_50 | 806-811 | hunflair:NA:Gene | denotes | SUB1A |
M_51 | 1011-1016 | hunflair:NA:Gene | denotes | SUB1A |
M_52 | 1124-1129 | hunflair:NA:Gene | denotes | SUB1A |
M_53 | 1374-1379 | hunflair:NA:Gene | denotes | SUB1A |
M_54 | 1501-1506 | hunflair:NA:Gene | denotes | SUB1A |
M_55 | 1723-1728 | hunflair:NA:Gene | denotes | SUB1A |
M_56 | 149-153 | hunflair:NA:Gene | denotes | Sub1 |
M_57 | 395-399 | hunflair:NA:Gene | denotes | Sub1 |
M_58 | 589-593 | hunflair:NA:Gene | denotes | Sub1 |
M_59 | 55-59 | pubtator:4530:Species | denotes | rice |
M_60 | 104-108 | pubtator:4530:Species | denotes | rice |
M_61 | 1673-1677 | pubtator:4530:Species | denotes | rice |
OryzaGP_2021_FLAIR
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
M_16 | 502-509 | hunflair:NA:Gene | denotes | SUB1A-2 |
M_0 | 87-92 | hunflair:NA:Gene | denotes | SUB1A |
M_1 | 323-328 | hunflair:NA:Gene | denotes | SUB1A |
M_2 | 468-473 | hunflair:NA:Gene | denotes | SUB1A |
M_3 | 502-507 | hunflair:NA:Gene | denotes | SUB1A |
M_4 | 605-610 | hunflair:NA:Gene | denotes | SUB1A |
M_5 | 658-663 | hunflair:NA:Gene | denotes | SUB1A |
M_6 | 722-727 | hunflair:NA:Gene | denotes | SUB1A |
M_7 | 806-811 | hunflair:NA:Gene | denotes | SUB1A |
M_8 | 1011-1016 | hunflair:NA:Gene | denotes | SUB1A |
M_9 | 1124-1129 | hunflair:NA:Gene | denotes | SUB1A |
M_10 | 1374-1379 | hunflair:NA:Gene | denotes | SUB1A |
M_11 | 1501-1506 | hunflair:NA:Gene | denotes | SUB1A |
M_12 | 1723-1728 | hunflair:NA:Gene | denotes | SUB1A |
M_13 | 55-59 | hunflair:NA:Species | denotes | rice |
M_14 | 104-108 | hunflair:NA:Species | denotes | rice |
M_15 | 1673-1677 | hunflair:NA:Species | denotes | rice |
M_17 | 722-729 | hunflair:NA:Gene | denotes | SUB1A-2 |
M_18 | 1374-1381 | hunflair:NA:Gene | denotes | SUB1A-2 |
M_19 | 605-612 | hunflair:NA:Gene | denotes | SUB1A-1 |
M_20 | 806-813 | hunflair:NA:Gene | denotes | SUB1A-1 |
M_21 | 1501-1508 | hunflair:NA:Gene | denotes | SUB1A-1 |
M_22 | 1458-1461 | hunflair:NA:Gene | denotes | GUS |
M_23 | 1553-1556 | hunflair:NA:Gene | denotes | GUS |
M_24 | 333-338 | hunflair:NA:Gene | denotes | SUB1C |
M_25 | 613-618 | hunflair:NA:Gene | denotes | SUB1C |
M_26 | 613-620 | hunflair:NA:Gene | denotes | SUB1C-1 |
M_27 | 149-153 | hunflair:NA:Gene | denotes | Sub1 |
M_28 | 395-399 | hunflair:NA:Gene | denotes | Sub1 |
M_29 | 589-593 | hunflair:NA:Gene | denotes | Sub1 |
Allie
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
SS1_20652530_1_0 | 134-147 | expanded | denotes | Submergence 1 |
SS2_20652530_1_0 | 149-153 | abbr | denotes | Sub1 |
AE1_20652530_1_0 | SS1_20652530_1_0 | SS2_20652530_1_0 | abbreviatedTo | Submergence 1,Sub1 |
OryzaGP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 60-81 | gene | denotes | submergence-tolerance |
T2 | 604-612 | gene | denotes | (SUB1A-1 |
T3 | 806-813 | gene | denotes | SUB1A-1 |
T4 | 1501-1508 | gene | denotes | SUB1A-1 |