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PubMed:20615486 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
T1 0-116 Sentence denotes Proteomics data repositories: providing a safe haven for your data and acting as a springboard for further research.
T2 117-326 Sentence denotes Despite the fact that data deposition is not a generalised fact yet in the field of proteomics, several mass spectrometry (MS) based proteomics repositories are publicly available for the scientific community.
T3 327-497 Sentence denotes The main existing resources are: the Global Proteome Machine Database (GPMDB), PeptideAtlas, the PRoteomics IDEntifications database (PRIDE), Tranche, and NCBI Peptidome.
T4 498-742 Sentence denotes In this review the capabilities of each of these will be described, paying special attention to four key properties: data types stored, applicable data submission strategies, supported formats, and available data mining and visualization tools.
T5 743-833 Sentence denotes Additionally, the data contents from model organisms will be enumerated for each resource.
T6 834-948 Sentence denotes There are other valuable smaller and/or more specialized repositories but they will not be covered in this review.
T7 949-1090 Sentence denotes Finally, the concept behind the ProteomeXchange consortium, a collaborative effort among the main resources in the field, will be introduced.
T1 0-116 Sentence denotes Proteomics data repositories: providing a safe haven for your data and acting as a springboard for further research.
T2 117-326 Sentence denotes Despite the fact that data deposition is not a generalised fact yet in the field of proteomics, several mass spectrometry (MS) based proteomics repositories are publicly available for the scientific community.
T3 327-497 Sentence denotes The main existing resources are: the Global Proteome Machine Database (GPMDB), PeptideAtlas, the PRoteomics IDEntifications database (PRIDE), Tranche, and NCBI Peptidome.
T4 498-742 Sentence denotes In this review the capabilities of each of these will be described, paying special attention to four key properties: data types stored, applicable data submission strategies, supported formats, and available data mining and visualization tools.
T5 743-833 Sentence denotes Additionally, the data contents from model organisms will be enumerated for each resource.
T6 834-948 Sentence denotes There are other valuable smaller and/or more specialized repositories but they will not be covered in this review.
T7 949-1090 Sentence denotes Finally, the concept behind the ProteomeXchange consortium, a collaborative effort among the main resources in the field, will be introduced.

Allie

Id Subject Object Predicate Lexical cue
SS1_20615486_1_0 221-238 expanded denotes mass spectrometry
SS2_20615486_1_0 240-242 abbr denotes MS
SS1_20615486_2_0 364-396 expanded denotes Global Proteome Machine Database
SS2_20615486_2_0 398-403 abbr denotes GPMDB
SS1_20615486_2_1 424-459 expanded denotes PRoteomics IDEntifications database
SS2_20615486_2_1 461-466 abbr denotes PRIDE
AE1_20615486_1_0 SS1_20615486_1_0 SS2_20615486_1_0 abbreviatedTo mass spectrometry,MS
AE1_20615486_2_0 SS1_20615486_2_0 SS2_20615486_2_0 abbreviatedTo Global Proteome Machine Database,GPMDB
AE1_20615486_2_1 SS1_20615486_2_1 SS2_20615486_2_1 abbreviatedTo PRoteomics IDEntifications database,PRIDE

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 786-795 Body_part denotes organisms http://purl.obolibrary.org/obo/UBERON_0000468