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PubMed:20543870 JSONTXT

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sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-132 Sentence denotes Expression profiling identifies new function of collapsin response mediator protein 4 as a metastasis-suppressor in prostate cancer.
TextSentencer_T2 133-252 Sentence denotes Metastasis is the chief cause of mortality from cancer, but the mechanisms leading to metastasis are poorly understood.
TextSentencer_T3 253-481 Sentence denotes We used a proteomics approach to screen for metastasis-associated proteins and found that collapsin response mediator protein-4 (CRMP4) expression was inversely associated with the lymph node metastasis of prostate cancer (PCa).
TextSentencer_T4 482-679 Sentence denotes Subsequent in vitro and in vivo studies revealed that overexpression of CRMP4 not only suppressed the invasion ability of PCa cells, but also strongly inhibited tumor metastasis in an animal model.
TextSentencer_T5 680-820 Sentence denotes Furthermore, methylation of a CpG island within the promoter region of the CRMP4 gene is responsible for downregulation of CRMP4 expression.
TextSentencer_T6 821-906 Sentence denotes Thus, in this study, we show new function of CRMP4 as a metastasis-suppressor in PCa.
TextSentencer_T7 907-1028 Sentence denotes The findings provide new mechanistic insights into metastasis and therapeutic potential for this most common male cancer.
T1 0-132 Sentence denotes Expression profiling identifies new function of collapsin response mediator protein 4 as a metastasis-suppressor in prostate cancer.
T2 133-252 Sentence denotes Metastasis is the chief cause of mortality from cancer, but the mechanisms leading to metastasis are poorly understood.
T3 253-481 Sentence denotes We used a proteomics approach to screen for metastasis-associated proteins and found that collapsin response mediator protein-4 (CRMP4) expression was inversely associated with the lymph node metastasis of prostate cancer (PCa).
T4 482-679 Sentence denotes Subsequent in vitro and in vivo studies revealed that overexpression of CRMP4 not only suppressed the invasion ability of PCa cells, but also strongly inhibited tumor metastasis in an animal model.
T5 680-820 Sentence denotes Furthermore, methylation of a CpG island within the promoter region of the CRMP4 gene is responsible for downregulation of CRMP4 expression.
T6 821-906 Sentence denotes Thus, in this study, we show new function of CRMP4 as a metastasis-suppressor in PCa.
T7 907-1028 Sentence denotes The findings provide new mechanistic insights into metastasis and therapeutic potential for this most common male cancer.

DisGeNET

Id Subject Object Predicate Lexical cue
T0 48-85 gene:1809 denotes collapsin response mediator protein 4
T1 91-101 disease:C0027627 denotes metastasis
T2 48-85 gene:1809 denotes collapsin response mediator protein 4
T3 116-131 disease:C0600139 denotes prostate cancer
T4 48-85 gene:1809 denotes collapsin response mediator protein 4
T5 116-131 disease:C0376358 denotes prostate cancer
T6 48-85 gene:1809 denotes collapsin response mediator protein 4
T7 91-101 disease:C2939420 denotes metastasis
T8 343-380 gene:1809 denotes collapsin response mediator protein-4
T9 297-307 disease:C0027627 denotes metastasis
T10 382-387 gene:1809 denotes CRMP4
T11 459-474 disease:C0376358 denotes prostate cancer
T12 343-380 gene:1809 denotes collapsin response mediator protein-4
T13 459-474 disease:C0376358 denotes prostate cancer
T14 382-387 gene:1809 denotes CRMP4
T15 434-455 disease:C0686619 denotes lymph node metastasis
T16 343-380 gene:1809 denotes collapsin response mediator protein-4
T17 434-455 disease:C0686619 denotes lymph node metastasis
T18 382-387 gene:1809 denotes CRMP4
T19 459-474 disease:C0600139 denotes prostate cancer
T20 343-380 gene:1809 denotes collapsin response mediator protein-4
T21 459-474 disease:C0600139 denotes prostate cancer
T22 382-387 gene:1809 denotes CRMP4
T23 297-307 disease:C0027627 denotes metastasis
T24 382-387 gene:1809 denotes CRMP4
T25 297-307 disease:C2939420 denotes metastasis
T26 343-380 gene:1809 denotes collapsin response mediator protein-4
T27 297-307 disease:C2939420 denotes metastasis
T28 554-559 gene:1809 denotes CRMP4
T29 643-659 disease:C0027627 denotes tumor metastasis
T30 554-559 gene:1809 denotes CRMP4
T31 643-659 disease:C2939419 denotes tumor metastasis
T32 866-871 gene:1809 denotes CRMP4
T33 877-887 disease:C2939420 denotes metastasis
T34 866-871 gene:1809 denotes CRMP4
T35 877-887 disease:C0027627 denotes metastasis
R1 T0 T1 associated_with collapsin response mediator protein 4,metastasis
R2 T2 T3 associated_with collapsin response mediator protein 4,prostate cancer
R3 T4 T5 associated_with collapsin response mediator protein 4,prostate cancer
R4 T6 T7 associated_with collapsin response mediator protein 4,metastasis
R5 T8 T9 associated_with collapsin response mediator protein-4,metastasis
R6 T10 T11 associated_with CRMP4,prostate cancer
R7 T12 T13 associated_with collapsin response mediator protein-4,prostate cancer
R8 T14 T15 associated_with CRMP4,lymph node metastasis
R9 T16 T17 associated_with collapsin response mediator protein-4,lymph node metastasis
R10 T18 T19 associated_with CRMP4,prostate cancer
R11 T20 T21 associated_with collapsin response mediator protein-4,prostate cancer
R12 T22 T23 associated_with CRMP4,metastasis
R13 T24 T25 associated_with CRMP4,metastasis
R14 T26 T27 associated_with collapsin response mediator protein-4,metastasis
R15 T28 T29 associated_with CRMP4,tumor metastasis
R16 T30 T31 associated_with CRMP4,tumor metastasis
R17 T32 T33 associated_with CRMP4,metastasis
R18 T34 T35 associated_with CRMP4,metastasis

PubmedHPO

Id Subject Object Predicate Lexical cue
T1 181-187 HP_0002664 denotes cancer
T2 459-474 HP_0012125 denotes prostate cancer
T3 468-474 HP_0002664 denotes cancer
T4 643-648 HP_0002664 denotes tumor
T5 1021-1027 HP_0002664 denotes cancer

Allie

Id Subject Object Predicate Lexical cue
SS1_20543870_2_0 343-380 expanded denotes collapsin response mediator protein-4
SS2_20543870_2_0 382-387 abbr denotes CRMP4
SS1_20543870_2_1 459-474 expanded denotes prostate cancer
SS2_20543870_2_1 476-479 abbr denotes PCa
AE1_20543870_2_0 SS1_20543870_2_0 SS2_20543870_2_0 abbreviatedTo collapsin response mediator protein-4,CRMP4
AE1_20543870_2_1 SS1_20543870_2_1 SS2_20543870_2_1 abbreviatedTo prostate cancer,PCa

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
20543870-0#48#85#gene1809 48-85 gene1809 denotes collapsin response mediator protein 4
20543870-0#91#101#diseaseC0027627 91-101 diseaseC0027627 denotes metastasis
20543870-0#116#131#diseaseC0376358 116-131 diseaseC0376358 denotes prostate cancer
20543870-0#116#131#diseaseC0600139 116-131 diseaseC0600139 denotes prostate cancer
20543870-2#90#127#gene1809 343-380 gene1809 denotes collapsin response mediator protein-4
20543870-2#129#134#gene1809 382-387 gene1809 denotes CRMP4
20543870-2#181#202#diseaseC0686619 434-455 diseaseC0686619 denotes lymph node metastasis
48#85#gene180991#101#diseaseC0027627 20543870-0#48#85#gene1809 20543870-0#91#101#diseaseC0027627 associated_with collapsin response mediator protein 4,metastasis
48#85#gene1809116#131#diseaseC0376358 20543870-0#48#85#gene1809 20543870-0#116#131#diseaseC0376358 associated_with collapsin response mediator protein 4,prostate cancer
48#85#gene1809116#131#diseaseC0600139 20543870-0#48#85#gene1809 20543870-0#116#131#diseaseC0600139 associated_with collapsin response mediator protein 4,prostate cancer
90#127#gene1809181#202#diseaseC0686619 20543870-2#90#127#gene1809 20543870-2#181#202#diseaseC0686619 associated_with collapsin response mediator protein-4,lymph node metastasis
129#134#gene1809181#202#diseaseC0686619 20543870-2#129#134#gene1809 20543870-2#181#202#diseaseC0686619 associated_with CRMP4,lymph node metastasis

DisGeNet-2017-sample

Id Subject Object Predicate Lexical cue
T1607 48-85 gene:1809 denotes collapsin response mediator protein 4
T1608 91-101 disease:C0027627 denotes metastasis
T1609 116-131 disease:C0376358 denotes prostate cancer
R1 T1607 T1608 associated_with collapsin response mediator protein 4,metastasis
R2 T1607 T1609 associated_with collapsin response mediator protein 4,prostate cancer
R3 T1607 T1609 associated_with collapsin response mediator protein 4,prostate cancer

UBERON-AE

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 434-439 http://purl.obolibrary.org/obo/UBERON_0002391 denotes lymph
PD-UBERON-AE-B_T2 434-444 http://purl.obolibrary.org/obo/UBERON_0000029 denotes lymph node

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 434-439 http://purl.obolibrary.org/obo/UBERON_0002391 denotes lymph
PD-UBERON-AE-B_T2 434-444 http://purl.obolibrary.org/obo/UBERON_0000029 denotes lymph node