PubMed:20428796 / 1082-1331 JSONTXT

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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T9 0-249 Sentence denotes In tissue samples with normal fibroblasts (NFs) serving as control samples, expression of TGF-beta1 and -beta2 was decreased when compared to keloid fibroblasts (KFs), while expression of TGF-beta3 and of TGF-betaRII was significantly higher in NFs.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
7278 90-110 GeneOrGeneProduct denotes TGF-beta1 and -beta2 NCBIGene:4052|NCBIGene:7042
7279 142-148 DiseaseOrPhenotypicFeature denotes keloid MESH:D007627
7280 188-197 GeneOrGeneProduct denotes TGF-beta3 NCBIGene:7043
7281 205-216 GeneOrGeneProduct denotes TGF-betaRII NCBIGene:7048

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T6 142-148 DiseaseOrPhenotypicFeature denotes keloid 0005348

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T27 48-55 GeneOrGeneProduct denotes serving
T28 90-99 GeneOrGeneProduct denotes TGF-beta1
T29 105-110 GeneOrGeneProduct denotes beta2
T30 188-197 GeneOrGeneProduct denotes TGF-beta3
T31 205-216 GeneOrGeneProduct denotes TGF-betaRII

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T17 90-99 GeneOrGeneProduct denotes TGF-beta1
T18 105-110 GeneOrGeneProduct denotes beta2
T19 188-197 GeneOrGeneProduct denotes TGF-beta3
T20 205-216 GeneOrGeneProduct denotes TGF-betaRII

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T11 142-148 DiseaseOrPhenotypicFeature denotes keloid D007627

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T13 90-99 GeneOrGeneProduct denotes TGF-beta1
T14 105-110 GeneOrGeneProduct denotes beta2
T15 188-197 GeneOrGeneProduct denotes TGF-beta3
T16 205-216 GeneOrGeneProduct denotes TGF-betaRII

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T8 142-148 DiseaseOrPhenotypicFeature denotes keloid 0005348

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T11 142-148 DiseaseOrPhenotypicFeature denotes keloid D007627

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T7 142-148 DiseaseOrPhenotypicFeature denotes keloid D007627

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label
T16 205-216 GeneOrGeneProduct denotes TGF-betaRII
T15 188-197 GeneOrGeneProduct denotes TGF-beta3
T14 105-110 GeneOrGeneProduct denotes beta2
T13 90-99 GeneOrGeneProduct denotes TGF-beta1
T38462 142-148 DiseaseOrPhenotypicFeature denotes keloid D007627

DisGeNET

Id Subject Object Predicate Lexical cue
T0 188-197 gene:7043 denotes TGF-beta3
T1 142-148 disease:C0022548 denotes keloid
R1 T0 T1 associated_with TGF-beta3,keloid

PubmedHPO

Id Subject Object Predicate Lexical cue
T6 142-148 HP_0010562 denotes keloid

Allie

Id Subject Object Predicate Lexical cue
SS1_20428796_8_0 23-41 expanded denotes normal fibroblasts
SS2_20428796_8_0 43-46 abbr denotes NFs
SS1_20428796_8_1 142-160 expanded denotes keloid fibroblasts
SS2_20428796_8_1 162-165 abbr denotes KFs
AE1_20428796_8_0 SS1_20428796_8_0 SS2_20428796_8_0 abbreviatedTo normal fibroblasts,NFs
AE1_20428796_8_1 SS1_20428796_8_1 SS2_20428796_8_1 abbreviatedTo keloid fibroblasts,KFs