
PubMed:20026605
Annnotations
GlyCosmos6-Glycan-Motif-Image
Id | Subject | Object | Predicate | Lexical cue | image |
---|---|---|---|---|---|
T1 | 780-789 | Glycan_Motif | denotes | galactose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE |
T3 | 829-844 | Glycan_Motif | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82109MW |
T4 | 885-892 | Glycan_Motif | denotes | mannose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ |
T5 | 1205-1220 | Glycan_Motif | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82109MW |
Glycosmos6-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue | glyco_epitope_db_id |
---|---|---|---|---|---|
T1 | 829-844 | GlycoEpitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
T2 | 1205-1220 | GlycoEpitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-118 | Sentence | denotes | Dual specificity of Langerin to sulfated and mannosylated glycans via a single C-type carbohydrate recognition domain. |
T2 | 119-299 | Sentence | denotes | Langerin is categorized as a C-type lectin selectively expressed in Langerhans cells, playing roles in the first line of defense against pathogens and in Birbeck granule formation. |
T3 | 300-538 | Sentence | denotes | Although these functions are thought to be exerted through glycan-binding activity of the C-type carbohydrate recognition domain, sugar-binding properties of Langerin have not been fully elucidated in relation to its biological functions. |
T4 | 539-739 | Sentence | denotes | Here, we investigated the glycan-binding specificity of Langerin using comprehensive glycoconjugate microarray, quantitative frontal affinity chromatography, and conventional cell biological analyses. |
T5 | 740-954 | Sentence | denotes | Langerin showed outstanding affinity to galactose-6-sulfated oligosaccharides, including keratan sulfate, while it preserved binding activity to mannose, as a common feature of the C-type lectins with an EPN motif. |
T6 | 955-1062 | Sentence | denotes | By a mutagenesis study, Lys-299 and Lys-313 were found to form extended binding sites for sulfated glycans. |
T7 | 1063-1255 | Sentence | denotes | Consistent with the former observation, the sulfated Langerin ligands were found to be expressed in brain and spleen, where the transcript of keratan sulfate 6-O-sulfotransferase is expressed. |
T8 | 1256-1428 | Sentence | denotes | Moreover, such sulfated ligands were up-regulated in glioblastoma relative to normal brain tissues, and Langerin-expressing cells were localized in malignant brain tissues. |
T9 | 1429-1544 | Sentence | denotes | Langerin also recognized pathogenic fungi, such as Candida and Malassezia, expressing heavily mannosylated glycans. |
T10 | 1545-1781 | Sentence | denotes | These observations provide strong evidence that Langerin mediates diverse functions on Langerhans cells through dual recognition of sulfated as well as mannosylated glycans by its uniquely evolved C-type carbohydrate-recognition domain. |
GlyCosmos6-Glycan-Motif-Structure
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 780-789 | https://glytoucan.org/Structures/Glycans/G65889KE | denotes | galactose |
T2 | 780-789 | https://glytoucan.org/Structures/Glycans/G68158BT | denotes | galactose |
T3 | 829-844 | https://glytoucan.org/Structures/Glycans/G82109MW | denotes | keratan sulfate |
T4 | 885-892 | https://glytoucan.org/Structures/Glycans/G70323CJ | denotes | mannose |
T5 | 1205-1220 | https://glytoucan.org/Structures/Glycans/G82109MW | denotes | keratan sulfate |
Glycosmos6-MAT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 1163-1168 | http://purl.obolibrary.org/obo/MAT_0000098 | denotes | brain |
T2 | 1173-1179 | http://purl.obolibrary.org/obo/MAT_0000085 | denotes | spleen |
T3 | 1341-1346 | http://purl.obolibrary.org/obo/MAT_0000098 | denotes | brain |
T4 | 1414-1419 | http://purl.obolibrary.org/obo/MAT_0000098 | denotes | brain |
PubmedHPO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 1309-1321 | HP_0100843 | denotes | glioblastoma |
HP-phenotype
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 1309-1321 | Phenotype | denotes | glioblastoma | HP:0012174 |
mondo_disease
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 1309-1321 | Disease | denotes | glioblastoma | http://purl.obolibrary.org/obo/MONDO_0018177|http://purl.obolibrary.org/obo/MONDO_0020690 |
GlyCosmos-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
---|---|---|---|---|---|
T1 | 829-844 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
T2 | 1205-1220 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
GlyCosmos15-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T1 | 1309-1321 | Phenotype | denotes | glioblastoma | HP:0012174 |
GlyCosmos15-NCBITAXON
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 1465-1470 | OrganismTaxon | denotes | fungi | 4751 |
T2 | 1480-1487 | OrganismTaxon | denotes | Candida | 5475 |
T3 | 1492-1502 | OrganismTaxon | denotes | Malassezia | 55193 |
GlyCosmos15-CL
Id | Subject | Object | Predicate | Lexical cue | cl_id |
---|---|---|---|---|---|
T1 | 187-203 | Cell | denotes | Langerhans cells | http://purl.obolibrary.org/obo/CL:0000453 |
T2 | 1632-1648 | Cell | denotes | Langerhans cells | http://purl.obolibrary.org/obo/CL:0000453 |
GlyCosmos15-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 187-203 | Body_part | denotes | Langerhans cells | http://purl.obolibrary.org/obo/CL_0000453 |
T2 | 664-671 | Body_part | denotes | frontal | http://purl.obolibrary.org/obo/UBERON_0000209 |
T3 | 1163-1168 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
T5 | 1173-1179 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
T6 | 1341-1346 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
T8 | 1414-1419 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
T10 | 1632-1648 | Body_part | denotes | Langerhans cells | http://purl.obolibrary.org/obo/CL_0000453 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-118 | Sentence | denotes | Dual specificity of Langerin to sulfated and mannosylated glycans via a single C-type carbohydrate recognition domain. |
T2 | 119-299 | Sentence | denotes | Langerin is categorized as a C-type lectin selectively expressed in Langerhans cells, playing roles in the first line of defense against pathogens and in Birbeck granule formation. |
T3 | 300-538 | Sentence | denotes | Although these functions are thought to be exerted through glycan-binding activity of the C-type carbohydrate recognition domain, sugar-binding properties of Langerin have not been fully elucidated in relation to its biological functions. |
T4 | 539-739 | Sentence | denotes | Here, we investigated the glycan-binding specificity of Langerin using comprehensive glycoconjugate microarray, quantitative frontal affinity chromatography, and conventional cell biological analyses. |
T5 | 740-954 | Sentence | denotes | Langerin showed outstanding affinity to galactose-6-sulfated oligosaccharides, including keratan sulfate, while it preserved binding activity to mannose, as a common feature of the C-type lectins with an EPN motif. |
T6 | 955-1062 | Sentence | denotes | By a mutagenesis study, Lys-299 and Lys-313 were found to form extended binding sites for sulfated glycans. |
T7 | 1063-1255 | Sentence | denotes | Consistent with the former observation, the sulfated Langerin ligands were found to be expressed in brain and spleen, where the transcript of keratan sulfate 6-O-sulfotransferase is expressed. |
T8 | 1256-1428 | Sentence | denotes | Moreover, such sulfated ligands were up-regulated in glioblastoma relative to normal brain tissues, and Langerin-expressing cells were localized in malignant brain tissues. |
T9 | 1429-1544 | Sentence | denotes | Langerin also recognized pathogenic fungi, such as Candida and Malassezia, expressing heavily mannosylated glycans. |
T10 | 1545-1781 | Sentence | denotes | These observations provide strong evidence that Langerin mediates diverse functions on Langerhans cells through dual recognition of sulfated as well as mannosylated glycans by its uniquely evolved C-type carbohydrate-recognition domain. |
GlyCosmos15-Sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-118 | Sentence | denotes | Dual specificity of Langerin to sulfated and mannosylated glycans via a single C-type carbohydrate recognition domain. |
T2 | 119-299 | Sentence | denotes | Langerin is categorized as a C-type lectin selectively expressed in Langerhans cells, playing roles in the first line of defense against pathogens and in Birbeck granule formation. |
T3 | 300-538 | Sentence | denotes | Although these functions are thought to be exerted through glycan-binding activity of the C-type carbohydrate recognition domain, sugar-binding properties of Langerin have not been fully elucidated in relation to its biological functions. |
T4 | 539-739 | Sentence | denotes | Here, we investigated the glycan-binding specificity of Langerin using comprehensive glycoconjugate microarray, quantitative frontal affinity chromatography, and conventional cell biological analyses. |
T5 | 740-954 | Sentence | denotes | Langerin showed outstanding affinity to galactose-6-sulfated oligosaccharides, including keratan sulfate, while it preserved binding activity to mannose, as a common feature of the C-type lectins with an EPN motif. |
T6 | 955-1062 | Sentence | denotes | By a mutagenesis study, Lys-299 and Lys-313 were found to form extended binding sites for sulfated glycans. |
T7 | 1063-1255 | Sentence | denotes | Consistent with the former observation, the sulfated Langerin ligands were found to be expressed in brain and spleen, where the transcript of keratan sulfate 6-O-sulfotransferase is expressed. |
T8 | 1256-1428 | Sentence | denotes | Moreover, such sulfated ligands were up-regulated in glioblastoma relative to normal brain tissues, and Langerin-expressing cells were localized in malignant brain tissues. |
T9 | 1429-1544 | Sentence | denotes | Langerin also recognized pathogenic fungi, such as Candida and Malassezia, expressing heavily mannosylated glycans. |
T10 | 1545-1781 | Sentence | denotes | These observations provide strong evidence that Langerin mediates diverse functions on Langerhans cells through dual recognition of sulfated as well as mannosylated glycans by its uniquely evolved C-type carbohydrate-recognition domain. |
Glycan-GlyCosmos
Id | Subject | Object | Predicate | Lexical cue | image |
---|---|---|---|---|---|
T1 | 829-844 | Glycan | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/latest/png/binary/G82109MW |
T2 | 1205-1220 | Glycan | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/latest/png/binary/G82109MW |
GlyCosmos15-GlycoEpitope
Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
---|---|---|---|---|---|
T1 | 829-844 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
T2 | 1205-1220 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | keratan sulfate | http://www.glycoepitope.jp/epitopes/EP0085 |
Lectin-Jamboree-Sentence
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1 | 0-118 | Sentence | denotes | Dual specificity of Langerin to sulfated and mannosylated glycans via a single C-type carbohydrate recognition domain. |
T2 | 119-299 | Sentence | denotes | Langerin is categorized as a C-type lectin selectively expressed in Langerhans cells, playing roles in the first line of defense against pathogens and in Birbeck granule formation. |
T3 | 300-538 | Sentence | denotes | Although these functions are thought to be exerted through glycan-binding activity of the C-type carbohydrate recognition domain, sugar-binding properties of Langerin have not been fully elucidated in relation to its biological functions. |
T4 | 539-739 | Sentence | denotes | Here, we investigated the glycan-binding specificity of Langerin using comprehensive glycoconjugate microarray, quantitative frontal affinity chromatography, and conventional cell biological analyses. |
T5 | 740-954 | Sentence | denotes | Langerin showed outstanding affinity to galactose-6-sulfated oligosaccharides, including keratan sulfate, while it preserved binding activity to mannose, as a common feature of the C-type lectins with an EPN motif. |
T6 | 955-1062 | Sentence | denotes | By a mutagenesis study, Lys-299 and Lys-313 were found to form extended binding sites for sulfated glycans. |
T7 | 1063-1255 | Sentence | denotes | Consistent with the former observation, the sulfated Langerin ligands were found to be expressed in brain and spleen, where the transcript of keratan sulfate 6-O-sulfotransferase is expressed. |
T8 | 1256-1428 | Sentence | denotes | Moreover, such sulfated ligands were up-regulated in glioblastoma relative to normal brain tissues, and Langerin-expressing cells were localized in malignant brain tissues. |
T9 | 1429-1544 | Sentence | denotes | Langerin also recognized pathogenic fungi, such as Candida and Malassezia, expressing heavily mannosylated glycans. |
T10 | 1545-1781 | Sentence | denotes | These observations provide strong evidence that Langerin mediates diverse functions on Langerhans cells through dual recognition of sulfated as well as mannosylated glycans by its uniquely evolved C-type carbohydrate-recognition domain. |
GlyCosmos15-Glycan
Id | Subject | Object | Predicate | Lexical cue | image |
---|---|---|---|---|---|
T1 | 829-844 | Glycan | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/latest/png/binary/G82109MW |
T2 | 1205-1220 | Glycan | denotes | keratan sulfate | https://api.glycosmos.org/wurcs2image/latest/png/binary/G82109MW |
GlyCosmos15-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T1 | 1309-1321 | Disease | denotes | glioblastoma | MONDO:0018177|MONDO:0020690 |
GlyCosmos15-FMA
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 187-203 | Body_part | denotes | Langerhans cells | FMA:63072 |
T2 | 273-288 | Body_part | denotes | Birbeck granule | FMA:70575 |
T3 | 1163-1168 | Body_part | denotes | brain | FMA:50801 |
T4 | 1173-1179 | Body_part | denotes | spleen | FMA:7196 |
T5 | 1341-1346 | Body_part | denotes | brain | FMA:50801 |
T6 | 1347-1354 | Body_part | denotes | tissues | FMA:9637 |
T7 | 1414-1419 | Body_part | denotes | brain | FMA:50801 |
T8 | 1420-1427 | Body_part | denotes | tissues | FMA:9637 |
T9 | 1632-1648 | Body_part | denotes | Langerhans cells | FMA:63072 |
GlyCosmos15-MAT
Id | Subject | Object | Predicate | Lexical cue | mat_id |
---|---|---|---|---|---|
T1 | 1163-1168 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
T2 | 1173-1179 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/MAT_0000085 |
T3 | 1341-1346 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
T4 | 1414-1419 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
NCBITAXON
Id | Subject | Object | Predicate | Lexical cue | db_id |
---|---|---|---|---|---|
T1 | 1465-1470 | OrganismTaxon | denotes | fungi | 4751 |
T2 | 1480-1487 | OrganismTaxon | denotes | Candida | 5475 |
T3 | 1492-1502 | OrganismTaxon | denotes | Malassezia | 55193 |
Anatomy-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T1 | 187-203 | Body_part | denotes | Langerhans cells | http://purl.obolibrary.org/obo/CL_0000453 |
T2 | 664-671 | Body_part | denotes | frontal | http://purl.obolibrary.org/obo/UBERON_0000209 |
T3 | 1163-1168 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
T5 | 1173-1179 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/UBERON_0002106 |
T6 | 1341-1346 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
T8 | 1414-1419 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636 |
T10 | 1632-1648 | Body_part | denotes | Langerhans cells | http://purl.obolibrary.org/obo/CL_0000453 |
Anatomy-MAT
Id | Subject | Object | Predicate | Lexical cue | mat_id |
---|---|---|---|---|---|
T1 | 1163-1168 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
T2 | 1173-1179 | Body_part | denotes | spleen | http://purl.obolibrary.org/obo/MAT_0000085 |
T3 | 1341-1346 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
T4 | 1414-1419 | Body_part | denotes | brain | http://purl.obolibrary.org/obo/MAT_0000098 |
CL-cell
Id | Subject | Object | Predicate | Lexical cue | cl_id |
---|---|---|---|---|---|
T1 | 187-203 | Cell | denotes | Langerhans cells | http://purl.obolibrary.org/obo/CL:0000453 |
T2 | 1632-1648 | Cell | denotes | Langerhans cells | http://purl.obolibrary.org/obo/CL:0000453 |