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PubMed:19897031 JSONTXT

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DisGeNET

Id Subject Object Predicate Lexical cue
T0 28-32 gene:3662 denotes IRF4
T1 111-149 disease:C0023452 denotes childhood acute lymphoblastic leukemia
T2 458-467 gene:5966 denotes NF-kappaB
T3 423-435 disease:C0006826 denotes malignancies
T4 451-456 gene:5966 denotes c-REL
T5 423-435 disease:C0006826 denotes malignancies
T6 194-339 gene:3662 denotes IRF) family of DNA-binding proteins regulates expression of interferon-inducible genes with roles in the immune response and carcinogenesis. IRF4
T7 423-435 disease:C0006826 denotes malignancies
T8 486-490 gene:3662 denotes IRF4
T9 579-604 disease:C0024305 denotes non-Hodgkin lymphoma (NHL
T10 486-490 gene:3662 denotes IRF4
T11 570-573 disease:C0023434 denotes CLL
T12 486-490 gene:3662 denotes IRF4
T13 543-568 disease:C0023434 denotes chronic lymphoid leukemia
T14 622-626 gene:3662 denotes IRF4
T15 648-686 disease:C0023452 denotes childhood acute lymphoblastic leukemia
R1 T0 T1 associated_with IRF4,childhood acute lymphoblastic leukemia
R2 T2 T3 associated_with NF-kappaB,malignancies
R3 T4 T5 associated_with c-REL,malignancies
R4 T6 T7 associated_with IRF) family of DNA-binding proteins regulates expression of interferon-inducible genes with roles in the immune response and carcinogenesis. IRF4,malignancies
R5 T8 T9 associated_with IRF4,non-Hodgkin lymphoma (NHL
R6 T10 T11 associated_with IRF4,CLL
R7 T12 T13 associated_with IRF4,chronic lymphoid leukemia
R8 T14 T15 associated_with IRF4,childhood acute lymphoblastic leukemia

Allie

Id Subject Object Predicate Lexical cue
SS1_19897031_1_0 164-192 expanded denotes interferon regulatory factor
SS2_19897031_1_0 194-197 abbr denotes IRF
SS1_19897031_3_0 543-568 expanded denotes chronic lymphoid leukemia
SS2_19897031_3_0 570-573 abbr denotes CLL
SS1_19897031_3_1 579-599 expanded denotes non-Hodgkin lymphoma
SS2_19897031_3_1 601-604 abbr denotes NHL
SS1_19897031_4_0 658-686 expanded denotes acute lymphoblastic leukemia
SS2_19897031_4_0 688-691 abbr denotes ALL
AE1_19897031_1_0 SS1_19897031_1_0 SS2_19897031_1_0 abbreviatedTo interferon regulatory factor,IRF
AE1_19897031_3_0 SS1_19897031_3_0 SS2_19897031_3_0 abbreviatedTo chronic lymphoid leukemia,CLL
AE1_19897031_3_1 SS1_19897031_3_1 SS2_19897031_3_1 abbreviatedTo non-Hodgkin lymphoma,NHL
AE1_19897031_4_0 SS1_19897031_4_0 SS2_19897031_4_0 abbreviatedTo acute lymphoblastic leukemia,ALL

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
19897031-0#28#32#gene3662 28-32 gene3662 denotes IRF4
19897031-0#111#149#diseaseC0023452 111-149 diseaseC0023452 denotes childhood acute lymphoblastic leukemia
19897031-3#0#4#gene3662 486-490 gene3662 denotes IRF4
19897031-3#57#82#diseaseC0023434 543-568 diseaseC0023434 denotes chronic lymphoid leukemia
19897031-3#84#87#diseaseC0023434 570-573 diseaseC0023434 denotes CLL
19897031-3#93#113#diseaseC0024305 579-599 diseaseC0024305 denotes non-Hodgkin lymphoma
19897031-3#115#118#diseaseC0024305 601-604 diseaseC0024305 denotes NHL
28#32#gene3662111#149#diseaseC0023452 19897031-0#28#32#gene3662 19897031-0#111#149#diseaseC0023452 associated_with IRF4,childhood acute lymphoblastic leukemia
0#4#gene366257#82#diseaseC0023434 19897031-3#0#4#gene3662 19897031-3#57#82#diseaseC0023434 associated_with IRF4,chronic lymphoid leukemia
0#4#gene366284#87#diseaseC0023434 19897031-3#0#4#gene3662 19897031-3#84#87#diseaseC0023434 associated_with IRF4,CLL
0#4#gene366293#113#diseaseC0024305 19897031-3#0#4#gene3662 19897031-3#93#113#diseaseC0024305 associated_with IRF4,non-Hodgkin lymphoma
0#4#gene3662115#118#diseaseC0024305 19897031-3#0#4#gene3662 19897031-3#115#118#diseaseC0024305 associated_with IRF4,NHL

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 775-785 SNP:rs12203592 denotes rs12203592
T2 896-899 DNAMutation:|SUB|C||T denotes C>T
T3 1039-1049 SNP:rs12203592 denotes rs12203592
T4 1196-1206 SNP:rs12203592 denotes rs12203592

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 153-158 Body_part denotes males http://purl.obolibrary.org/obo/MAT_0000029
T2 795-799 Body_part denotes male http://purl.obolibrary.org/obo/MAT_0000029
T3 1339-1344 Body_part denotes males http://purl.obolibrary.org/obo/MAT_0000029

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T9 1620-1633 Disease denotes childhood ALL http://purl.obolibrary.org/obo/MONDO_0000870
T10 1630-1633 Disease denotes ALL http://purl.obolibrary.org/obo/MONDO_0004967
T1 111-149 Disease denotes childhood acute lymphoblastic leukemia http://purl.obolibrary.org/obo/MONDO_0000870
T2 551-568 Disease denotes lymphoid leukemia http://purl.obolibrary.org/obo/MONDO_0005402
T3 570-573 Disease denotes CLL http://purl.obolibrary.org/obo/MONDO_0001014|http://purl.obolibrary.org/obo/MONDO_0004948
T5 579-599 Disease denotes non-Hodgkin lymphoma http://purl.obolibrary.org/obo/MONDO_0018908
T6 601-604 Disease denotes NHL http://purl.obolibrary.org/obo/MONDO_0018908
T7 648-686 Disease denotes childhood acute lymphoblastic leukemia http://purl.obolibrary.org/obo/MONDO_0000870
T8 688-691 Disease denotes ALL http://purl.obolibrary.org/obo/MONDO_0004967

PubTator4TogoVar

Id Subject Object Predicate Lexical cue resolved_to
39 775-785 SNP denotes rs12203592 tmVar:rs12203592;VariantGroup:0;CorrespondingGene:3662;RS#:12203592;CorrespondingSpecies:9606
41 1039-1049 SNP denotes rs12203592 tmVar:rs12203592;VariantGroup:0;CorrespondingGene:3662;RS#:12203592;CorrespondingSpecies:9606
43 1196-1206 SNP denotes rs12203592 tmVar:rs12203592;VariantGroup:0;CorrespondingGene:3662;RS#:12203592;CorrespondingSpecies:9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 416-422 Body_part denotes B-cell http://purl.obolibrary.org/obo/CL_0000236
T2 795-808 Body_part denotes male-specific http://purl.obolibrary.org/obo/UBERON_0014403

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 121-149 Phenotype denotes acute lymphoblastic leukemia HP:0006721
T2 551-568 Phenotype denotes lymphoid leukemia HP:0005526
T3 579-599 Phenotype denotes non-Hodgkin lymphoma HP:0012539
T4 601-604 Phenotype denotes NHL HP:0012539
T5 658-686 Phenotype denotes acute lymphoblastic leukemia HP:0006721
T6 688-691 Phenotype denotes ALL HP:0006721
T7 1630-1633 Phenotype denotes ALL HP:0006721

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 127-140 Cell denotes lymphoblastic http://purl.obolibrary.org/obo/CL:0017005
T2 384-391 Cell denotes T cells http://purl.obolibrary.org/obo/CL:0000084
T3 416-422 Cell denotes B-cell http://purl.obolibrary.org/obo/CL:0000236
T4 664-677 Cell denotes lymphoblastic http://purl.obolibrary.org/obo/CL:0017005

PubTatorOnTogoVar

Id Subject Object Predicate Lexical cue resolved_to
39 775-785 SNP denotes rs12203592 tmVar:rs12203592;VariantGroup:0;CorrespondingGene:3662;RS#:12203592;CorrespondingSpecies:9606
41 1039-1049 SNP denotes rs12203592 tmVar:rs12203592;VariantGroup:0;CorrespondingGene:3662;RS#:12203592;CorrespondingSpecies:9606
43 1196-1206 SNP denotes rs12203592 tmVar:rs12203592;VariantGroup:0;CorrespondingGene:3662;RS#:12203592;CorrespondingSpecies:9606
T1 775-785 SNP denotes rs12203592 tmVar:rs12203592;VariantGroup:0;CorrespondingGene:3662;RS#:12203592;CorrespondingSpecies:9606
T2 1039-1049 SNP denotes rs12203592 tmVar:rs12203592;VariantGroup:0;CorrespondingGene:3662;RS#:12203592;CorrespondingSpecies:9606
T3 1196-1206 SNP denotes rs12203592 tmVar:rs12203592;VariantGroup:0;CorrespondingGene:3662;RS#:12203592;CorrespondingSpecies:9606