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PubMed:1984449 JSONTXT

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jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 13-18 protein denotes NF-KB
T2 26-34 cell_type denotes monocyte
T3 166-193 cell_line denotes U937 promonocytic cell line
T4 253-293 cell_type denotes purified human monocytes and macrophages
T5 406-437 protein denotes cellular transactivation factor
T6 438-443 protein denotes NF-KB
T7 451-485 DNA denotes double repeat-KB enhancer sequence
T8 501-521 DNA denotes long terminal repeat
T9 577-587 cell_line denotes U937 cells
T10 605-610 protein denotes NF-KB
T11 662-671 cell_type denotes monocytes
T12 675-686 cell_type denotes macrophages
T13 701-706 protein denotes NF-KB
T14 776-786 cell_line denotes U937 cells
T15 829-841 protein denotes NF-KB factor
T16 1007-1029 cell_line denotes monocytic cell lineage
T17 1106-1111 protein denotes NF-KB

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-75 Sentence denotes Induction of NF-KB during monocyte differentiation by HIV type 1 infection.
S2 76-294 Sentence denotes The production of human immunodeficiency virus type 1 (HIV-1) progeny was followed in the U937 promonocytic cell line after stimulation either with retinoic acid or PMA, and in purified human monocytes and macrophages.
S3 295-522 Sentence denotes Electrophoretic mobility shift assays and Southwestern blotting experiments were used to detect the binding of cellular transactivation factor NF-KB to the double repeat-KB enhancer sequence located in the long terminal repeat.
S4 523-636 Sentence denotes PMA treatment, and not retinoic acid treatment of the U937 cells acts in inducing NF-KB expression in the nuclei.
S5 637-770 Sentence denotes In nuclear extracts from monocytes or macrophages, induction of NF-KB occurred only if the cells were previously infected with HIV-1.
S6 771-975 Sentence denotes When U937 cells were infected with HIV-1, no induction of NF-KB factor was detected, whereas high level of progeny virions was produced, suggesting that this factor was not required for viral replication.
S7 976-1123 Sentence denotes These results indicate that in monocytic cell lineage, HIV-1 could mimic some differentiation/activation stimuli allowing nuclear NF-KB expression.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C2 13-18 NP denotes NF-KB
C1 0-18 NP denotes Induction of NF-KB
C3 54-64 NP denotes HIV type 1
C4 94-137 NP denotes human immunodeficiency virus type 1 (HIV-1)
C5 241-244 NP denotes PMA
C6 406-443 NP denotes cellular transactivation factor NF-KB
C7 523-526 NP denotes PMA
C8 573-587 NP denotes the U937 cells
C10 605-610 NP denotes NF-KB
C9 605-635 NP denotes NF-KB expression in the nuclei
C12 701-706 NP denotes NF-KB
C11 688-706 NP denotes induction of NF-KB
C13 724-733 NP denotes the cells
C14 764-769 NP denotes HIV-1
C15 776-786 NP denotes U937 cells
C16 806-811 NP denotes HIV-1
C18 829-834 NP denotes NF-KB
C17 829-841 NP denotes NF-KB factor
C19 924-935 NP denotes this factor
C20 1031-1036 NP denotes HIV-1
C22 1106-1111 NP denotes NF-KB
C21 1098-1122 NP denotes nuclear NF-KB expression
R1 C4 C3 coref-ident human immunodeficiency virus type 1 (HIV-1),HIV type 1
R2 C6 C2 coref-ident cellular transactivation factor NF-KB,NF-KB
R3 C7 C5 coref-ident PMA,PMA
R4 C10 C2 coref-ident NF-KB,NF-KB
R5 C12 C10 coref-ident NF-KB,NF-KB
R6 C11 C1 coref-ident induction of NF-KB,Induction of NF-KB
R7 C13 C8 coref-other the cells,the U937 cells
R8 C14 C4 coref-ident HIV-1,human immunodeficiency virus type 1 (HIV-1)
R9 C15 C13 coref-other U937 cells,the cells
R10 C16 C14 coref-ident HIV-1,HIV-1
R11 C18 C12 coref-ident NF-KB,NF-KB
R12 C19 C17 coref-ident this factor,NF-KB factor
R13 C20 C16 coref-ident HIV-1,HIV-1
R14 C22 C18 coref-ident NF-KB,NF-KB
R15 C21 C9 coref-other nuclear NF-KB expression,NF-KB expression in the nuclei

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 13-18 protein_molecule denotes NF-KB
T2 26-34 cell_type denotes monocyte
T3 54-64 virus denotes HIV type 1
T4 94-129 virus denotes human immunodeficiency virus type 1
T5 131-136 virus denotes HIV-1
T6 166-193 cell_line denotes U937 promonocytic cell line
T7 224-237 other_organic_compound denotes retinoic acid
T8 241-244 other_organic_compound denotes PMA
T9 295-332 other_name denotes Electrophoretic mobility shift assays
T10 337-370 other_name denotes Southwestern blotting experiments
T11 406-437 protein_molecule denotes cellular transactivation factor
T12 438-443 protein_molecule denotes NF-KB
T13 451-485 DNA_domain_or_region denotes double repeat-KB enhancer sequence
T14 501-521 DNA_domain_or_region denotes long terminal repeat
T15 523-526 other_organic_compound denotes PMA
T16 546-559 other_organic_compound denotes retinoic acid
T17 577-587 cell_line denotes U937 cells
T18 605-610 protein_molecule denotes NF-KB
T19 629-635 cell_component denotes nuclei
T20 640-656 cell_component denotes nuclear extracts
T21 662-671 cell_type denotes monocytes
T22 675-686 cell_type denotes macrophages
T23 701-706 protein_molecule denotes NF-KB
T24 764-769 virus denotes HIV-1
T25 776-786 cell_line denotes U937 cells
T26 806-811 virus denotes HIV-1
T27 829-834 protein_molecule denotes NF-KB
T28 878-893 virus denotes progeny virions
T29 957-974 other_name denotes viral replication
T30 1007-1029 cell_line denotes monocytic cell lineage
T31 1031-1036 virus denotes HIV-1
T32 1054-1088 other_name denotes differentiation/activation stimuli
T33 1098-1105 other_name denotes nuclear
T34 1106-1111 protein_molecule denotes NF-KB