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PubMed:19776077 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 20-23 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T2 20-23 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T3 606-609 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T4 606-609 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T5 773-776 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T6 773-776 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T7 848-851 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T8 848-851 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T9 1009-1012 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T10 1009-1012 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T11 1205-1208 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T12 1205-1208 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T13 1345-1348 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T14 1345-1348 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T15 1418-1421 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T16 1418-1421 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T17 1557-1560 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T18 1557-1560 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 20-23 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ
T3 606-609 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ
T5 773-776 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ
T7 848-851 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ
T9 1009-1012 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ
T11 1205-1208 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ
T13 1345-1348 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ
T15 1418-1421 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ
T17 1557-1560 Glycan_Motif denotes GD3 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G98544DH|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G81928IQ

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-84 Sentence denotes Characterization of GD3 ganglioside as a novel biomarker of mouse neural stem cells.
TextSentencer_T2 85-261 Sentence denotes Neural stem cells (NSCs) are undifferentiated neural cells characterized by their high proliferative potential and the capacity for self-renewal with retention of multipotency.
TextSentencer_T3 262-392 Sentence denotes Over the past two decades, there has been a huge effort to identify NSCs morphologically, genetically, and molecular biologically.
TextSentencer_T4 393-453 Sentence denotes It is still controversial, however, what bona fide NSCs are.
TextSentencer_T5 454-576 Sentence denotes To define and characterize NSCs more systematically, it is crucial to explore novel cell-surface marker molecules of NSCs.
TextSentencer_T6 577-826 Sentence denotes In this study, we focused on GD3, a b-series ganglioside that is enriched in the immature brain and the subventricular zone (SVZ) of the postnatal and adult brain, and evaluated the usefulness of GD3 as a cell-surface biomarker for identifying NSCs.
TextSentencer_T7 827-990 Sentence denotes We demonstrated that GD3 was expressed in more than 80% of NSCs prepared from embryonic, postnatal, and adult mouse brain tissue by the neurosphere culture method.
TextSentencer_T8 991-1204 Sentence denotes The percentage of GD3-expressing NSCs in neurospheres was nearly the same as it was in neurospheres derived from embryonic, postnatal, and adult brains but decreased drastically to about 40% after differentiation.
TextSentencer_T9 1205-1431 Sentence denotes GD3(+) cells isolated from embryonic mouse striata, postnatal, and adult mouse SVZs by fluorescence-activated cell sorting with an R24 anti-GD3 monoclonal antibody efficiently generated neurospheres compared with GD3(-) cells.
TextSentencer_T10 1432-1531 Sentence denotes These cells possessed multipotency to differentiate into neurons, astrocytes, and oligodendrocytes.
TextSentencer_T11 1532-1638 Sentence denotes These data indicate that GD3 is a unique and powerful cell-surface biomarker to identify and isolate NSCs.
T1 0-84 Sentence denotes Characterization of GD3 ganglioside as a novel biomarker of mouse neural stem cells.
T2 85-261 Sentence denotes Neural stem cells (NSCs) are undifferentiated neural cells characterized by their high proliferative potential and the capacity for self-renewal with retention of multipotency.
T3 262-392 Sentence denotes Over the past two decades, there has been a huge effort to identify NSCs morphologically, genetically, and molecular biologically.
T4 393-453 Sentence denotes It is still controversial, however, what bona fide NSCs are.
T5 454-576 Sentence denotes To define and characterize NSCs more systematically, it is crucial to explore novel cell-surface marker molecules of NSCs.
T6 577-826 Sentence denotes In this study, we focused on GD3, a b-series ganglioside that is enriched in the immature brain and the subventricular zone (SVZ) of the postnatal and adult brain, and evaluated the usefulness of GD3 as a cell-surface biomarker for identifying NSCs.
T7 827-990 Sentence denotes We demonstrated that GD3 was expressed in more than 80% of NSCs prepared from embryonic, postnatal, and adult mouse brain tissue by the neurosphere culture method.
T8 991-1204 Sentence denotes The percentage of GD3-expressing NSCs in neurospheres was nearly the same as it was in neurospheres derived from embryonic, postnatal, and adult brains but decreased drastically to about 40% after differentiation.
T9 1205-1431 Sentence denotes GD3(+) cells isolated from embryonic mouse striata, postnatal, and adult mouse SVZs by fluorescence-activated cell sorting with an R24 anti-GD3 monoclonal antibody efficiently generated neurospheres compared with GD3(-) cells.
T10 1432-1531 Sentence denotes These cells possessed multipotency to differentiate into neurons, astrocytes, and oligodendrocytes.
T11 1532-1638 Sentence denotes These data indicate that GD3 is a unique and powerful cell-surface biomarker to identify and isolate NSCs.
T1 0-84 Sentence denotes Characterization of GD3 ganglioside as a novel biomarker of mouse neural stem cells.
T2 85-261 Sentence denotes Neural stem cells (NSCs) are undifferentiated neural cells characterized by their high proliferative potential and the capacity for self-renewal with retention of multipotency.
T3 262-392 Sentence denotes Over the past two decades, there has been a huge effort to identify NSCs morphologically, genetically, and molecular biologically.
T4 393-453 Sentence denotes It is still controversial, however, what bona fide NSCs are.
T5 454-576 Sentence denotes To define and characterize NSCs more systematically, it is crucial to explore novel cell-surface marker molecules of NSCs.
T6 577-826 Sentence denotes In this study, we focused on GD3, a b-series ganglioside that is enriched in the immature brain and the subventricular zone (SVZ) of the postnatal and adult brain, and evaluated the usefulness of GD3 as a cell-surface biomarker for identifying NSCs.
T7 827-990 Sentence denotes We demonstrated that GD3 was expressed in more than 80% of NSCs prepared from embryonic, postnatal, and adult mouse brain tissue by the neurosphere culture method.
T8 991-1204 Sentence denotes The percentage of GD3-expressing NSCs in neurospheres was nearly the same as it was in neurospheres derived from embryonic, postnatal, and adult brains but decreased drastically to about 40% after differentiation.
T9 1205-1431 Sentence denotes GD3(+) cells isolated from embryonic mouse striata, postnatal, and adult mouse SVZs by fluorescence-activated cell sorting with an R24 anti-GD3 monoclonal antibody efficiently generated neurospheres compared with GD3(-) cells.
T10 1432-1531 Sentence denotes These cells possessed multipotency to differentiate into neurons, astrocytes, and oligodendrocytes.
T11 1532-1638 Sentence denotes These data indicate that GD3 is a unique and powerful cell-surface biomarker to identify and isolate NSCs.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 20-23 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T2 20-23 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T3 606-609 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T4 606-609 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T5 773-776 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T6 773-776 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T7 848-851 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T8 848-851 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T9 1009-1012 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T10 1009-1012 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T11 1205-1208 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T12 1205-1208 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T13 1345-1348 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T14 1345-1348 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T15 1418-1421 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T16 1418-1421 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3
T17 1557-1560 https://glytoucan.org/Structures/Glycans/G81928IQ denotes GD3
T18 1557-1560 https://glytoucan.org/Structures/Glycans/G98544DH denotes GD3

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 73-83 http://purl.obolibrary.org/obo/MAT_0000185 denotes stem cells
T2 73-77 http://purl.obolibrary.org/obo/MAT_0000239 denotes stem
T3 92-102 http://purl.obolibrary.org/obo/MAT_0000185 denotes stem cells
T4 92-96 http://purl.obolibrary.org/obo/MAT_0000239 denotes stem
T5 667-672 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain
T6 734-739 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain
T7 943-948 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain
T8 1136-1142 http://purl.obolibrary.org/obo/MAT_0000098 denotes brains

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 24-35 FMAID:82816 denotes ganglioside
_T2 24-35 FMAID:196811 denotes ganglioside
_T3 73-83 FMAID:63368 denotes stem cells
_T4 73-83 FMAID:167693 denotes stem cells
_T5 73-102 FMAID:260608 denotes stem cells. Neural stem cells
_T6 73-102 FMAID:260609 denotes stem cells. Neural stem cells
_T7 78-83 FMAID:169002 denotes cells
_T8 78-83 FMAID:68646 denotes cells
_T9 85-102 FMAID:201610 denotes Neural stem cells
_T10 85-102 FMAID:70333 denotes Neural stem cells
_T11 85-102 FMAID:86684 denotes Neural stem cells
_T12 85-102 FMAID:171175 denotes Neural stem cells
_T13 92-102 FMAID:167693 denotes stem cells
_T14 92-102 FMAID:63368 denotes stem cells
_T15 97-102 FMAID:169002 denotes cells
_T16 97-102 FMAID:68646 denotes cells
_T17 131-143 FMAID:174560 denotes neural cells
_T18 131-143 FMAID:201593 denotes neural cells
_T19 131-143 FMAID:86667 denotes neural cells
_T20 131-143 FMAID:171175 denotes neural cells
_T21 131-143 FMAID:201610 denotes neural cells
_T22 131-143 FMAID:72550 denotes neural cells
_T23 131-143 FMAID:70333 denotes neural cells
_T24 131-143 FMAID:86684 denotes neural cells
_T25 138-143 FMAID:169002 denotes cells
_T26 138-143 FMAID:68646 denotes cells
_T27 538-550 FMAID:212684 denotes cell-surface
_T28 538-550 FMAID:200942 denotes cell-surface
_T29 543-550 FMAID:50594 denotes surface
_T30 543-550 FMAID:146300 denotes surface
_T31 622-633 FMAID:82816 denotes ganglioside
_T32 622-633 FMAID:196811 denotes ganglioside
_T33 667-672 FMAID:146514 denotes brain
_T34 667-672 FMAID:50801 denotes brain
_T35 734-739 FMAID:146514 denotes brain
_T36 734-739 FMAID:50801 denotes brain
_T37 782-794 FMAID:200942 denotes cell-surface
_T38 782-794 FMAID:212684 denotes cell-surface
_T39 787-794 FMAID:146300 denotes surface
_T40 787-794 FMAID:50594 denotes surface
_T41 943-948 FMAID:146514 denotes brain
_T42 943-948 FMAID:50801 denotes brain
_T43 949-955 FMAID:256050 denotes tissue
_T44 1136-1142 FMAID:146514 denotes brains
_T45 1136-1142 FMAID:50801 denotes brains
_T46 1212-1217 FMAID:169002 denotes cells
_T47 1212-1217 FMAID:68646 denotes cells
_T48 1248-1255 FMAID:76746 denotes striata
_T49 1248-1255 FMAID:183901 denotes striata
_T50 1360-1368 FMAID:167180 denotes antibody
_T51 1425-1430 FMAID:68646 denotes cells
_T52 1425-1430 FMAID:169002 denotes cells
_T53 1438-1443 FMAID:68646 denotes cells
_T54 1438-1443 FMAID:169002 denotes cells
_T55 1489-1496 FMAID:150783 denotes neurons
_T56 1489-1496 FMAID:166033 denotes neurons
_T57 1489-1496 FMAID:54527 denotes neurons
_T58 1498-1508 FMAID:150807 denotes astrocytes
_T59 1498-1508 FMAID:54537 denotes astrocytes
_T60 1498-1508 FMAID:213865 denotes astrocytes
_T61 1498-1508 FMAID:150808 denotes astrocytes
_T62 1514-1530 FMAID:150811 denotes oligodendrocytes
_T63 1514-1530 FMAID:54540 denotes oligodendrocytes
_T64 1514-1530 FMAID:150812 denotes oligodendrocytes
_T65 1586-1598 FMAID:212684 denotes cell-surface
_T66 1586-1598 FMAID:200942 denotes cell-surface
_T67 1591-1598 FMAID:146300 denotes surface
_T68 1591-1598 FMAID:50594 denotes surface

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 78-83 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T2 97-102 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T3 138-143 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T4 949-955 http://purl.bioontology.org/ontology/STY/T024 denotes tissue
T5 1212-1217 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T6 1349-1359 http://purl.bioontology.org/ontology/NCBITAXON/608684 denotes monoclonal
T7 1425-1430 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T8 1438-1443 http://purl.bioontology.org/ontology/STY/T025 denotes cells

GO-BP

Id Subject Object Predicate Lexical cue
T1 235-244 http://purl.obolibrary.org/obo/GO_0051235 denotes retention
T2 1305-1319 http://purl.obolibrary.org/obo/GO_0001775 denotes activated cell
T3 1470-1496 http://purl.obolibrary.org/obo/GO_0030182 denotes differentiate into neurons

GO-MF

Id Subject Object Predicate Lexical cue
T1 1360-1368 http://purl.obolibrary.org/obo/GO_0003823 denotes antibody

GO-CC

Id Subject Object Predicate Lexical cue
T1 78-83 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T2 97-102 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T3 138-143 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T4 1212-1217 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T5 1425-1430 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T6 538-542 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T7 782-786 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T8 1315-1319 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T9 1586-1590 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T10 538-550 http://purl.obolibrary.org/obo/GO_0009986 denotes cell-surface
T11 782-794 http://purl.obolibrary.org/obo/GO_0009986 denotes cell-surface
T12 1586-1598 http://purl.obolibrary.org/obo/GO_0009986 denotes cell-surface

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 667-672 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T2 734-739 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T3 943-948 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
T4 1136-1142 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brains
T5 949-955 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue

Allie

Id Subject Object Predicate Lexical cue
SS1_19776077_1_0 85-102 expanded denotes Neural stem cells
SS2_19776077_1_0 104-108 abbr denotes NSCs
SS1_19776077_5_0 681-700 expanded denotes subventricular zone
SS2_19776077_5_0 702-705 abbr denotes SVZ
AE1_19776077_1_0 SS1_19776077_1_0 SS2_19776077_1_0 abbreviatedTo Neural stem cells,NSCs
AE1_19776077_5_0 SS1_19776077_5_0 SS2_19776077_5_0 abbreviatedTo subventricular zone,SVZ

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 73-77 http://purl.obolibrary.org/obo/MAT_0000239 denotes stem
T2 73-83 http://purl.obolibrary.org/obo/MAT_0000185 denotes stem cells
T3 92-96 http://purl.obolibrary.org/obo/MAT_0000239 denotes stem
T4 92-102 http://purl.obolibrary.org/obo/MAT_0000185 denotes stem cells
T5 667-672 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain
T6 734-739 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain
T7 943-948 http://purl.obolibrary.org/obo/MAT_0000098 denotes brain
T8 1136-1142 http://purl.obolibrary.org/obo/MAT_0000098 denotes brains

GlycoBiology-Epitope

Id Subject Object Predicate Lexical cue
PD-GlycoEpitope-B_T1 1336-1339 http://www.glycoepitope.jp/epitopes/AN0417 denotes R24

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 667-672 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
PD-UBERON-AE-B_T2 734-739 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
PD-UBERON-AE-B_T3 943-948 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brain
PD-UBERON-AE-B_T4 1136-1142 http://purl.obolibrary.org/obo/UBERON_0000955 denotes brains
PD-UBERON-AE-B_T5 949-955 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T6 1489-1496 http://purl.obolibrary.org/obo/UBERON_2000602 denotes neurons

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 20-23 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T2 606-609 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T3 773-776 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T4 848-851 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T5 1009-1012 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T6 1205-1208 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T7 1345-1348 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T8 1418-1421 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T9 1557-1560 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH

GlyCosmos15-NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 60-65 OrganismTaxon denotes mouse 10088|10090
T3 937-942 OrganismTaxon denotes mouse 10088|10090
T5 1242-1247 OrganismTaxon denotes mouse 10088|10090
T7 1278-1283 OrganismTaxon denotes mouse 10088|10090

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 66-83 Cell denotes neural stem cells http://purl.obolibrary.org/obo/CL:0000047
T2 85-102 Cell denotes Neural stem cells http://purl.obolibrary.org/obo/CL:0000047
T3 92-102 Cell denotes stem cells http://purl.obolibrary.org/obo/CL:0000034
T4 104-108 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T5 131-143 Cell denotes neural cells http://purl.obolibrary.org/obo/CL:0002319
T6 330-334 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T7 444-448 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T8 481-485 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T9 571-575 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T10 821-825 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T11 886-890 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T12 1024-1028 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T13 1489-1496 Cell denotes neurons http://purl.obolibrary.org/obo/CL:0000540
T14 1498-1508 Cell denotes astrocytes http://purl.obolibrary.org/obo/CL:0000127
T15 1514-1530 Cell denotes oligodendrocytes http://purl.obolibrary.org/obo/CL:0000128
T16 1633-1637 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 73-83 Body_part denotes stem cells http://purl.obolibrary.org/obo/CL_0000034
T2 92-102 Body_part denotes stem cells http://purl.obolibrary.org/obo/CL_0000034
T3 131-143 Body_part denotes neural cells http://purl.obolibrary.org/obo/CL_0002319
T4 681-700 Body_part denotes subventricular zone http://purl.obolibrary.org/obo/UBERON_0004922
T5 702-705 Body_part denotes SVZ http://purl.obolibrary.org/obo/UBERON_0004023
T6 734-739 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T8 943-948 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T10 949-955 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T11 1498-1508 Body_part denotes astrocytes http://purl.obolibrary.org/obo/CL_0000127
T12 1514-1530 Body_part denotes oligodendrocytes http://purl.obolibrary.org/obo/CL_0000128

GlyCosmos15-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 73-83 Body_part denotes stem cells http://purl.obolibrary.org/obo/MAT_0000185
T2 92-102 Body_part denotes stem cells http://purl.obolibrary.org/obo/MAT_0000185
T3 667-672 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T4 734-739 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T5 943-948 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T6 1136-1142 Body_part denotes brains http://purl.obolibrary.org/obo/MAT_0000098

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-84 Sentence denotes Characterization of GD3 ganglioside as a novel biomarker of mouse neural stem cells.
TextSentencer_T2 85-261 Sentence denotes Neural stem cells (NSCs) are undifferentiated neural cells characterized by their high proliferative potential and the capacity for self-renewal with retention of multipotency.
TextSentencer_T3 262-392 Sentence denotes Over the past two decades, there has been a huge effort to identify NSCs morphologically, genetically, and molecular biologically.
TextSentencer_T4 393-453 Sentence denotes It is still controversial, however, what bona fide NSCs are.
TextSentencer_T5 454-576 Sentence denotes To define and characterize NSCs more systematically, it is crucial to explore novel cell-surface marker molecules of NSCs.
TextSentencer_T6 577-826 Sentence denotes In this study, we focused on GD3, a b-series ganglioside that is enriched in the immature brain and the subventricular zone (SVZ) of the postnatal and adult brain, and evaluated the usefulness of GD3 as a cell-surface biomarker for identifying NSCs.
TextSentencer_T7 827-990 Sentence denotes We demonstrated that GD3 was expressed in more than 80% of NSCs prepared from embryonic, postnatal, and adult mouse brain tissue by the neurosphere culture method.
TextSentencer_T8 991-1204 Sentence denotes The percentage of GD3-expressing NSCs in neurospheres was nearly the same as it was in neurospheres derived from embryonic, postnatal, and adult brains but decreased drastically to about 40% after differentiation.
TextSentencer_T9 1205-1431 Sentence denotes GD3(+) cells isolated from embryonic mouse striata, postnatal, and adult mouse SVZs by fluorescence-activated cell sorting with an R24 anti-GD3 monoclonal antibody efficiently generated neurospheres compared with GD3(-) cells.
TextSentencer_T10 1432-1531 Sentence denotes These cells possessed multipotency to differentiate into neurons, astrocytes, and oligodendrocytes.
TextSentencer_T11 1532-1638 Sentence denotes These data indicate that GD3 is a unique and powerful cell-surface biomarker to identify and isolate NSCs.
T1 0-84 Sentence denotes Characterization of GD3 ganglioside as a novel biomarker of mouse neural stem cells.
T2 85-261 Sentence denotes Neural stem cells (NSCs) are undifferentiated neural cells characterized by their high proliferative potential and the capacity for self-renewal with retention of multipotency.
T3 262-392 Sentence denotes Over the past two decades, there has been a huge effort to identify NSCs morphologically, genetically, and molecular biologically.
T4 393-453 Sentence denotes It is still controversial, however, what bona fide NSCs are.
T5 454-576 Sentence denotes To define and characterize NSCs more systematically, it is crucial to explore novel cell-surface marker molecules of NSCs.
T6 577-826 Sentence denotes In this study, we focused on GD3, a b-series ganglioside that is enriched in the immature brain and the subventricular zone (SVZ) of the postnatal and adult brain, and evaluated the usefulness of GD3 as a cell-surface biomarker for identifying NSCs.
T7 827-990 Sentence denotes We demonstrated that GD3 was expressed in more than 80% of NSCs prepared from embryonic, postnatal, and adult mouse brain tissue by the neurosphere culture method.
T8 991-1204 Sentence denotes The percentage of GD3-expressing NSCs in neurospheres was nearly the same as it was in neurospheres derived from embryonic, postnatal, and adult brains but decreased drastically to about 40% after differentiation.
T9 1205-1431 Sentence denotes GD3(+) cells isolated from embryonic mouse striata, postnatal, and adult mouse SVZs by fluorescence-activated cell sorting with an R24 anti-GD3 monoclonal antibody efficiently generated neurospheres compared with GD3(-) cells.
T10 1432-1531 Sentence denotes These cells possessed multipotency to differentiate into neurons, astrocytes, and oligodendrocytes.
T11 1532-1638 Sentence denotes These data indicate that GD3 is a unique and powerful cell-surface biomarker to identify and isolate NSCs.
T1 0-84 Sentence denotes Characterization of GD3 ganglioside as a novel biomarker of mouse neural stem cells.
T2 85-261 Sentence denotes Neural stem cells (NSCs) are undifferentiated neural cells characterized by their high proliferative potential and the capacity for self-renewal with retention of multipotency.
T3 262-392 Sentence denotes Over the past two decades, there has been a huge effort to identify NSCs morphologically, genetically, and molecular biologically.
T4 393-453 Sentence denotes It is still controversial, however, what bona fide NSCs are.
T5 454-576 Sentence denotes To define and characterize NSCs more systematically, it is crucial to explore novel cell-surface marker molecules of NSCs.
T6 577-826 Sentence denotes In this study, we focused on GD3, a b-series ganglioside that is enriched in the immature brain and the subventricular zone (SVZ) of the postnatal and adult brain, and evaluated the usefulness of GD3 as a cell-surface biomarker for identifying NSCs.
T7 827-990 Sentence denotes We demonstrated that GD3 was expressed in more than 80% of NSCs prepared from embryonic, postnatal, and adult mouse brain tissue by the neurosphere culture method.
T8 991-1204 Sentence denotes The percentage of GD3-expressing NSCs in neurospheres was nearly the same as it was in neurospheres derived from embryonic, postnatal, and adult brains but decreased drastically to about 40% after differentiation.
T9 1205-1431 Sentence denotes GD3(+) cells isolated from embryonic mouse striata, postnatal, and adult mouse SVZs by fluorescence-activated cell sorting with an R24 anti-GD3 monoclonal antibody efficiently generated neurospheres compared with GD3(-) cells.
T10 1432-1531 Sentence denotes These cells possessed multipotency to differentiate into neurons, astrocytes, and oligodendrocytes.
T11 1532-1638 Sentence denotes These data indicate that GD3 is a unique and powerful cell-surface biomarker to identify and isolate NSCs.

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-84 Sentence denotes Characterization of GD3 ganglioside as a novel biomarker of mouse neural stem cells.
T2 85-261 Sentence denotes Neural stem cells (NSCs) are undifferentiated neural cells characterized by their high proliferative potential and the capacity for self-renewal with retention of multipotency.
T3 262-392 Sentence denotes Over the past two decades, there has been a huge effort to identify NSCs morphologically, genetically, and molecular biologically.
T4 393-453 Sentence denotes It is still controversial, however, what bona fide NSCs are.
T5 454-576 Sentence denotes To define and characterize NSCs more systematically, it is crucial to explore novel cell-surface marker molecules of NSCs.
T6 577-826 Sentence denotes In this study, we focused on GD3, a b-series ganglioside that is enriched in the immature brain and the subventricular zone (SVZ) of the postnatal and adult brain, and evaluated the usefulness of GD3 as a cell-surface biomarker for identifying NSCs.
T7 827-990 Sentence denotes We demonstrated that GD3 was expressed in more than 80% of NSCs prepared from embryonic, postnatal, and adult mouse brain tissue by the neurosphere culture method.
T8 991-1204 Sentence denotes The percentage of GD3-expressing NSCs in neurospheres was nearly the same as it was in neurospheres derived from embryonic, postnatal, and adult brains but decreased drastically to about 40% after differentiation.
T9 1205-1431 Sentence denotes GD3(+) cells isolated from embryonic mouse striata, postnatal, and adult mouse SVZs by fluorescence-activated cell sorting with an R24 anti-GD3 monoclonal antibody efficiently generated neurospheres compared with GD3(-) cells.
T10 1432-1531 Sentence denotes These cells possessed multipotency to differentiate into neurons, astrocytes, and oligodendrocytes.
T11 1532-1638 Sentence denotes These data indicate that GD3 is a unique and powerful cell-surface biomarker to identify and isolate NSCs.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 20-23 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T2 606-609 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T3 773-776 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T4 848-851 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T5 1009-1012 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T6 1205-1208 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T7 1345-1348 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T8 1418-1421 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH
T9 1557-1560 Glycan denotes GD3 https://api.glycosmos.org/wurcs2image/latest/png/binary/G98544DH

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 60-65 OrganismTaxon denotes mouse 10088|10090
T3 937-942 OrganismTaxon denotes mouse 10088|10090
T5 1242-1247 OrganismTaxon denotes mouse 10088|10090
T7 1278-1283 OrganismTaxon denotes mouse 10088|10090

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 73-83 Body_part denotes stem cells http://purl.obolibrary.org/obo/CL_0000034
T2 92-102 Body_part denotes stem cells http://purl.obolibrary.org/obo/CL_0000034
T3 131-143 Body_part denotes neural cells http://purl.obolibrary.org/obo/CL_0002319
T4 681-700 Body_part denotes subventricular zone http://purl.obolibrary.org/obo/UBERON_0004922
T5 702-705 Body_part denotes SVZ http://purl.obolibrary.org/obo/UBERON_0004023
T6 734-739 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T8 943-948 Body_part denotes brain http://purl.obolibrary.org/obo/UBERON_0000955|http://purl.obolibrary.org/obo/UBERON_6110636
T10 949-955 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T11 1498-1508 Body_part denotes astrocytes http://purl.obolibrary.org/obo/CL_0000127
T12 1514-1530 Body_part denotes oligodendrocytes http://purl.obolibrary.org/obo/CL_0000128

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 73-83 Body_part denotes stem cells http://purl.obolibrary.org/obo/MAT_0000185
T2 92-102 Body_part denotes stem cells http://purl.obolibrary.org/obo/MAT_0000185
T3 667-672 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T4 734-739 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T5 943-948 Body_part denotes brain http://purl.obolibrary.org/obo/MAT_0000098
T6 1136-1142 Body_part denotes brains http://purl.obolibrary.org/obo/MAT_0000098

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 66-83 Cell denotes neural stem cells http://purl.obolibrary.org/obo/CL:0000047
T2 85-102 Cell denotes Neural stem cells http://purl.obolibrary.org/obo/CL:0000047
T3 92-102 Cell denotes stem cells http://purl.obolibrary.org/obo/CL:0000034
T4 104-108 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T5 131-143 Cell denotes neural cells http://purl.obolibrary.org/obo/CL:0002319
T6 330-334 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T7 444-448 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T8 481-485 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T9 571-575 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T10 821-825 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T11 886-890 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T12 1024-1028 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047
T13 1489-1496 Cell denotes neurons http://purl.obolibrary.org/obo/CL:0000540
T14 1498-1508 Cell denotes astrocytes http://purl.obolibrary.org/obo/CL:0000127
T15 1514-1530 Cell denotes oligodendrocytes http://purl.obolibrary.org/obo/CL:0000128
T16 1633-1637 Cell denotes NSCs http://purl.obolibrary.org/obo/CL:0000047