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PubMed:19770128 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 250-256 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose
T2 757-764 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 250-256 Glycan_Motif denotes fucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82576YO
T2 757-764 Glycan_Motif denotes mannose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G70323CJ

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-128 Sentence denotes Structural basis of the affinity for oligomannosides and analogs displayed by BC2L-A, a Burkholderia cenocepacia soluble lectin.
TextSentencer_T2 129-307 Sentence denotes The opportunistic pathogen Burkholderia cenocepacia contains three soluble carbohydrate-binding proteins, related to the fucose-binding lectin PA-IIL from Pseudomonas aeruginosa.
TextSentencer_T3 308-453 Sentence denotes All contain a PA-IIL-like domain and two of them have an additional N-terminal domain that displays no sequence similarities with known proteins.
TextSentencer_T4 454-729 Sentence denotes Printed arrays screening performed on the shortest one, B. cenocepacia lectin A (BC2L-A), demonstrated the strict specificity for oligomannose-type N-glycan structures (Lameignere E, Malinovská L, Sláviková M, Duchaud E, Mitchell EP, Varrot A, Sedo O, Imberty A, Wimmerová M.
TextSentencer_T5 730-735 Sentence denotes 2008.
TextSentencer_T6 736-842 Sentence denotes Structural basis for mannose recognition by a lectin from opportunistic bacteria Burkholderia cenocepacia.
TextSentencer_T7 843-853 Sentence denotes Biochem J.
TextSentencer_T8 854-868 Sentence denotes 411:307-318.).
TextSentencer_T9 869-1143 Sentence denotes The disaccharides alphaMan1-2Man, alphaMan1-3Man, and alphaMan1-6Man and the trisaccharide alphaMan1-3(alphaMan1-6)Man were tested by titration microcalorimetry in order to evaluate their affinity for BC2L-A in solution and to characterize the thermodynamics of the binding.
TextSentencer_T10 1144-1261 Sentence denotes Oligomannose analogs presenting two mannoside residues separated by either flexible or rigid spacer were also tested.
TextSentencer_T11 1262-1469 Sentence denotes Only the rigid one yields to high affinity binding with a fast kinetics of clustering, while the flexible analog and the trimannoside display moderate affinities and no clustering effect on short time scale.
TextSentencer_T12 1470-1612 Sentence denotes The crystal structures of BC2L-A have been obtained in complex with alphaMan1-3Man disaccharide and alphaMan1(alphaMan1-6)-3Man trisaccharide.
TextSentencer_T13 1613-1879 Sentence denotes The lengthy time required for the co-crystallization with the trisaccharide allowed for the formation of cluster since in the BC2L-A-trimannose complex solved at 1.1 A resolution, the sugar creates a bridge between two adjacent dimers, yielding to molecular strings.
TextSentencer_T14 1880-1994 Sentence denotes AFM experiments were performed in order to visualize the filaments formed in solution by this type of interaction.
T1 0-128 Sentence denotes Structural basis of the affinity for oligomannosides and analogs displayed by BC2L-A, a Burkholderia cenocepacia soluble lectin.
T2 129-307 Sentence denotes The opportunistic pathogen Burkholderia cenocepacia contains three soluble carbohydrate-binding proteins, related to the fucose-binding lectin PA-IIL from Pseudomonas aeruginosa.
T3 308-453 Sentence denotes All contain a PA-IIL-like domain and two of them have an additional N-terminal domain that displays no sequence similarities with known proteins.
T4 454-735 Sentence denotes Printed arrays screening performed on the shortest one, B. cenocepacia lectin A (BC2L-A), demonstrated the strict specificity for oligomannose-type N-glycan structures (Lameignere E, Malinovská L, Sláviková M, Duchaud E, Mitchell EP, Varrot A, Sedo O, Imberty A, Wimmerová M. 2008.
T5 736-842 Sentence denotes Structural basis for mannose recognition by a lectin from opportunistic bacteria Burkholderia cenocepacia.
T6 843-868 Sentence denotes Biochem J. 411:307-318.).
T7 869-1143 Sentence denotes The disaccharides alphaMan1-2Man, alphaMan1-3Man, and alphaMan1-6Man and the trisaccharide alphaMan1-3(alphaMan1-6)Man were tested by titration microcalorimetry in order to evaluate their affinity for BC2L-A in solution and to characterize the thermodynamics of the binding.
T8 1144-1261 Sentence denotes Oligomannose analogs presenting two mannoside residues separated by either flexible or rigid spacer were also tested.
T9 1262-1469 Sentence denotes Only the rigid one yields to high affinity binding with a fast kinetics of clustering, while the flexible analog and the trimannoside display moderate affinities and no clustering effect on short time scale.
T10 1470-1612 Sentence denotes The crystal structures of BC2L-A have been obtained in complex with alphaMan1-3Man disaccharide and alphaMan1(alphaMan1-6)-3Man trisaccharide.
T11 1613-1879 Sentence denotes The lengthy time required for the co-crystallization with the trisaccharide allowed for the formation of cluster since in the BC2L-A-trimannose complex solved at 1.1 A resolution, the sugar creates a bridge between two adjacent dimers, yielding to molecular strings.
T12 1880-1994 Sentence denotes AFM experiments were performed in order to visualize the filaments formed in solution by this type of interaction.
T1 0-128 Sentence denotes Structural basis of the affinity for oligomannosides and analogs displayed by BC2L-A, a Burkholderia cenocepacia soluble lectin.
T2 129-307 Sentence denotes The opportunistic pathogen Burkholderia cenocepacia contains three soluble carbohydrate-binding proteins, related to the fucose-binding lectin PA-IIL from Pseudomonas aeruginosa.
T3 308-453 Sentence denotes All contain a PA-IIL-like domain and two of them have an additional N-terminal domain that displays no sequence similarities with known proteins.
T4 454-729 Sentence denotes Printed arrays screening performed on the shortest one, B. cenocepacia lectin A (BC2L-A), demonstrated the strict specificity for oligomannose-type N-glycan structures (Lameignere E, Malinovská L, Sláviková M, Duchaud E, Mitchell EP, Varrot A, Sedo O, Imberty A, Wimmerová M.
T5 730-735 Sentence denotes 2008.
T6 736-842 Sentence denotes Structural basis for mannose recognition by a lectin from opportunistic bacteria Burkholderia cenocepacia.
T7 843-853 Sentence denotes Biochem J.
T8 854-868 Sentence denotes 411:307-318.).
T9 869-1143 Sentence denotes The disaccharides alphaMan1-2Man, alphaMan1-3Man, and alphaMan1-6Man and the trisaccharide alphaMan1-3(alphaMan1-6)Man were tested by titration microcalorimetry in order to evaluate their affinity for BC2L-A in solution and to characterize the thermodynamics of the binding.
T10 1144-1261 Sentence denotes Oligomannose analogs presenting two mannoside residues separated by either flexible or rigid spacer were also tested.
T11 1262-1469 Sentence denotes Only the rigid one yields to high affinity binding with a fast kinetics of clustering, while the flexible analog and the trimannoside display moderate affinities and no clustering effect on short time scale.
T12 1470-1612 Sentence denotes The crystal structures of BC2L-A have been obtained in complex with alphaMan1-3Man disaccharide and alphaMan1(alphaMan1-6)-3Man trisaccharide.
T13 1613-1879 Sentence denotes The lengthy time required for the co-crystallization with the trisaccharide allowed for the formation of cluster since in the BC2L-A-trimannose complex solved at 1.1 A resolution, the sugar creates a bridge between two adjacent dimers, yielding to molecular strings.
T14 1880-1994 Sentence denotes AFM experiments were performed in order to visualize the filaments formed in solution by this type of interaction.

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 250-256 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose
T2 757-764 https://glytoucan.org/Structures/Glycans/G70323CJ denotes mannose

GlycoBiology-PACDB

Id Subject Object Predicate Lexical cue
_T1 88-112 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC347 denotes Burkholderia cenocepacia
_T2 88-112 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC372 denotes Burkholderia cenocepacia
_T3 88-112 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC464 denotes Burkholderia cenocepacia
_T4 88-112 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC096 denotes Burkholderia cenocepacia
_T5 88-112 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC420 denotes Burkholderia cenocepacia
_T6 88-112 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC065 denotes Burkholderia cenocepacia
_T7 88-112 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC385 denotes Burkholderia cenocepacia
_T8 156-180 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC065 denotes Burkholderia cenocepacia
_T9 156-180 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC372 denotes Burkholderia cenocepacia
_T10 156-180 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC347 denotes Burkholderia cenocepacia
_T11 156-180 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC385 denotes Burkholderia cenocepacia
_T12 156-180 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC464 denotes Burkholderia cenocepacia
_T13 156-180 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC096 denotes Burkholderia cenocepacia
_T14 156-180 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC420 denotes Burkholderia cenocepacia
_T15 284-306 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC001,LEC005,LEC007,LEC029,LEC030,LEC032,LEC135,LEC191,LEC229,LEC231,LEC368,LEC447,LEC617,LEC676,PGG008 denotes Pseudomonas aeruginosa
_T16 284-306 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC703 denotes Pseudomonas aeruginosa
_T17 284-306 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC709 denotes Pseudomonas aeruginosa
_T18 284-306 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC584 denotes Pseudomonas aeruginosa
_T19 284-306 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC466 denotes Pseudomonas aeruginosa
_T20 284-306 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC325 denotes Pseudomonas aeruginosa
_T21 284-306 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC721 denotes Pseudomonas aeruginosa
_T22 817-841 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC372 denotes Burkholderia cenocepacia
_T23 817-841 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC464 denotes Burkholderia cenocepacia
_T24 817-841 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC065 denotes Burkholderia cenocepacia
_T25 817-841 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC385 denotes Burkholderia cenocepacia
_T26 817-841 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC096 denotes Burkholderia cenocepacia
_T27 817-841 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC347 denotes Burkholderia cenocepacia
_T28 817-841 http://acgg.asia/db/diseases/pacdb/lec?ids=LEC420 denotes Burkholderia cenocepacia

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 204-216 FMAID:197276 denotes carbohydrate
_T2 204-216 FMAID:82737 denotes carbohydrate
_T3 225-233 FMAID:165447 denotes proteins
_T4 225-233 FMAID:67257 denotes proteins
_T5 250-256 FMAID:82790 denotes fucose
_T6 250-256 FMAID:196784 denotes fucose
_T7 444-452 FMAID:165447 denotes proteins
_T8 444-452 FMAID:67257 denotes proteins
_T9 757-764 FMAID:196796 denotes mannose
_T10 757-764 FMAID:82801 denotes mannose
_T11 873-886 FMAID:196733 denotes disaccharides
_T12 873-886 FMAID:82744 denotes disaccharides
_T13 993-999 FMAID:178661 denotes tested
_T14 1254-1260 FMAID:178661 denotes tested
_T15 1553-1565 FMAID:82744 denotes disaccharide
_T16 1553-1565 FMAID:196733 denotes disaccharide
_T17 1797-1802 FMAID:196724 denotes sugar

uniprot-human

Id Subject Object Predicate Lexical cue
T1 204-233 http://www.uniprot.org/uniprot/Q9H585 denotes carbohydrate-binding proteins
T2 217-242 http://www.uniprot.org/uniprot/Q9BY08 denotes binding proteins, related
T3 272-274 http://www.uniprot.org/uniprot/P04746 denotes PA
T4 322-324 http://www.uniprot.org/uniprot/P04746 denotes PA
T5 272-274 http://www.uniprot.org/uniprot/Q9UL45 denotes PA
T6 322-324 http://www.uniprot.org/uniprot/Q9UL45 denotes PA
T7 684-686 http://www.uniprot.org/uniprot/Q9UCI8 denotes EP
T8 1880-1883 http://www.uniprot.org/uniprot/P43652 denotes AFM

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 272-274 http://www.uniprot.org/uniprot/P00688 denotes PA
T2 322-324 http://www.uniprot.org/uniprot/P00688 denotes PA
T3 684-686 http://www.uniprot.org/uniprot/P31786 denotes EP

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 88-100 http://purl.bioontology.org/ontology/NCBITAXON/482957 denotes Burkholderia
T2 88-100 http://purl.bioontology.org/ontology/NCBITAXON/634127 denotes Burkholderia
T3 88-100 http://purl.bioontology.org/ontology/NCBITAXON/32008 denotes Burkholderia
T4 88-100 http://purl.bioontology.org/ontology/NCBITAXON/948107 denotes Burkholderia
T5 88-100 http://purl.bioontology.org/ontology/NCBITAXON/219649 denotes Burkholderia
T6 88-100 http://purl.bioontology.org/ontology/NCBITAXON/337 denotes Burkholderia
T7 88-100 http://purl.bioontology.org/ontology/NCBITAXON/386056 denotes Burkholderia
T8 88-100 http://purl.bioontology.org/ontology/NCBITAXON/311230 denotes Burkholderia
T9 88-112 http://purl.bioontology.org/ontology/NCBITAXON/215535 denotes Burkholderia cenocepacia
T10 88-112 http://purl.bioontology.org/ontology/NCBITAXON/292 denotes Burkholderia cenocepacia
T11 156-168 http://purl.bioontology.org/ontology/NCBITAXON/311230 denotes Burkholderia
T12 156-168 http://purl.bioontology.org/ontology/NCBITAXON/482957 denotes Burkholderia
T13 156-168 http://purl.bioontology.org/ontology/NCBITAXON/386056 denotes Burkholderia
T14 156-168 http://purl.bioontology.org/ontology/NCBITAXON/948107 denotes Burkholderia
T15 156-168 http://purl.bioontology.org/ontology/NCBITAXON/634127 denotes Burkholderia
T16 156-168 http://purl.bioontology.org/ontology/NCBITAXON/219649 denotes Burkholderia
T17 156-168 http://purl.bioontology.org/ontology/NCBITAXON/32008 denotes Burkholderia
T18 156-168 http://purl.bioontology.org/ontology/NCBITAXON/337 denotes Burkholderia
T19 156-180 http://purl.bioontology.org/ontology/NCBITAXON/215535 denotes Burkholderia cenocepacia
T20 156-180 http://purl.bioontology.org/ontology/NCBITAXON/292 denotes Burkholderia cenocepacia
T21 235-242 http://purl.bioontology.org/ontology/NCBITAXON/353209 denotes related
T22 284-295 http://purl.bioontology.org/ontology/NCBITAXON/651740 denotes Pseudomonas
T23 284-295 http://purl.bioontology.org/ontology/NCBITAXON/135621 denotes Pseudomonas
T24 284-306 http://purl.bioontology.org/ontology/NCBITAXON/287 denotes Pseudomonas aeruginosa
T25 808-816 http://purl.bioontology.org/ontology/NCBITAXON/629395 denotes bacteria
T26 808-816 http://purl.bioontology.org/ontology/NCBITAXON/2 denotes bacteria
T27 817-829 http://purl.bioontology.org/ontology/NCBITAXON/634127 denotes Burkholderia
T28 817-829 http://purl.bioontology.org/ontology/NCBITAXON/337 denotes Burkholderia
T29 817-829 http://purl.bioontology.org/ontology/NCBITAXON/311230 denotes Burkholderia
T30 817-829 http://purl.bioontology.org/ontology/NCBITAXON/32008 denotes Burkholderia
T31 817-829 http://purl.bioontology.org/ontology/NCBITAXON/386056 denotes Burkholderia
T32 817-829 http://purl.bioontology.org/ontology/NCBITAXON/219649 denotes Burkholderia
T33 817-829 http://purl.bioontology.org/ontology/NCBITAXON/482957 denotes Burkholderia
T34 817-829 http://purl.bioontology.org/ontology/NCBITAXON/948107 denotes Burkholderia
T35 817-841 http://purl.bioontology.org/ontology/NCBITAXON/292 denotes Burkholderia cenocepacia
T36 817-841 http://purl.bioontology.org/ontology/NCBITAXON/215535 denotes Burkholderia cenocepacia
T37 1428-1441 http://purl.bioontology.org/ontology/NCBITAXON/120948 denotes no clustering
T38 1428-1441 http://purl.bioontology.org/ontology/NCBITAXON/120947 denotes no clustering
T39 1428-1441 http://purl.bioontology.org/ontology/NCBITAXON/120946 denotes no clustering
T40 1647-1649 http://purl.bioontology.org/ontology/NCBITAXON/13893 denotes co

GO-BP

Id Subject Object Predicate Lexical cue
T1 1320-1324 http://purl.obolibrary.org/obo/GO_0033867 denotes fast
T2 1705-1714 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

GO-MF

Id Subject Object Predicate Lexical cue
T1 204-224 http://purl.obolibrary.org/obo/GO_0030246 denotes carbohydrate-binding
T2 217-224 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T3 257-264 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T4 1135-1142 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T5 1305-1312 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T6 217-224 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T7 257-264 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T8 1135-1142 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T9 1305-1312 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T10 217-224 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T11 257-264 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T12 1135-1142 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T13 1305-1312 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T14 217-224 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T15 257-264 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T16 1135-1142 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T17 1305-1312 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T18 217-233 http://purl.obolibrary.org/obo/GO_0005515 denotes binding proteins
T19 250-264 http://purl.obolibrary.org/obo/GO_0042806 denotes fucose-binding

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 1463-1468 http://purl.obolibrary.org/obo/UBERON_0002542 denotes scale

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 602-610 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycan

Lectin

Id Subject Object Predicate Lexical cue
Lectin_T1 984-987 https://acgg.asia/db/lfdb/LfDB0217 denotes Man

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 308-311 "http://rdf.glycoinfo.org/glycan/G41652MJ" denotes All
GlycanIUPAC_T2 308-311 "http://rdf.glycoinfo.org/glycan/G20761YC" denotes All
GlycanIUPAC_T3 308-311 "http://rdf.glycoinfo.org/glycan/G19807HM" denotes All
GlycanIUPAC_T4 308-311 "http://rdf.glycoinfo.org/glycan/G20351TE" denotes All
GlycanIUPAC_T5 308-311 "http://rdf.glycoinfo.org/glycan/G71957MR" denotes All
GlycanIUPAC_T6 308-311 "http://rdf.glycoinfo.org/glycan/G59040AE" denotes All
GlycanIUPAC_T7 308-311 "http://rdf.glycoinfo.org/glycan/G14987PW" denotes All
GlycanIUPAC_T8 308-311 "http://rdf.glycoinfo.org/glycan/G95064PC" denotes All
GlycanIUPAC_T9 308-311 "http://rdf.glycoinfo.org/glycan/G39143AQ" denotes All
GlycanIUPAC_T10 308-311 "http://rdf.glycoinfo.org/glycan/G65149OO" denotes All
GlycanIUPAC_T11 308-311 "http://rdf.glycoinfo.org/glycan/G02766SY" denotes All
GlycanIUPAC_T12 308-311 "http://rdf.glycoinfo.org/glycan/G26019KJ" denotes All
GlycanIUPAC_T13 308-311 "http://rdf.glycoinfo.org/glycan/G36429CZ" denotes All
GlycanIUPAC_T14 308-311 "http://rdf.glycoinfo.org/glycan/G89633TP" denotes All
GlycanIUPAC_T15 308-311 "http://rdf.glycoinfo.org/glycan/G28494FO" denotes All
GlycanIUPAC_T16 308-311 "http://rdf.glycoinfo.org/glycan/G06219CP" denotes All
GlycanIUPAC_T17 308-311 "http://rdf.glycoinfo.org/glycan/G44237SM" denotes All
GlycanIUPAC_T18 308-311 "http://rdf.glycoinfo.org/glycan/G57948RL" denotes All
GlycanIUPAC_T19 308-311 "http://rdf.glycoinfo.org/glycan/G64016DN" denotes All
GlycanIUPAC_T20 308-311 "http://rdf.glycoinfo.org/glycan/G14536PC" denotes All
GlycanIUPAC_T21 308-311 "http://rdf.glycoinfo.org/glycan/G14356FW" denotes All
GlycanIUPAC_T22 308-311 "http://rdf.glycoinfo.org/glycan/G34565UO" denotes All
GlycanIUPAC_T23 308-311 "http://rdf.glycoinfo.org/glycan/G67124MW" denotes All
GlycanIUPAC_T24 308-311 "http://rdf.glycoinfo.org/glycan/G71457ZU" denotes All
GlycanIUPAC_T25 308-311 "http://rdf.glycoinfo.org/glycan/G55228VZ" denotes All
GlycanIUPAC_T26 308-311 "http://rdf.glycoinfo.org/glycan/G31034MJ" denotes All
GlycanIUPAC_T27 308-311 "http://rdf.glycoinfo.org/glycan/G25776IP" denotes All
GlycanIUPAC_T28 308-311 "http://rdf.glycoinfo.org/glycan/G64442BV" denotes All
GlycanIUPAC_T29 308-311 "http://rdf.glycoinfo.org/glycan/G57018LE" denotes All
GlycanIUPAC_T30 308-311 "http://rdf.glycoinfo.org/glycan/G61761GX" denotes All
GlycanIUPAC_T31 308-311 "http://rdf.glycoinfo.org/glycan/G76318UX" denotes All
GlycanIUPAC_T32 308-311 "http://rdf.glycoinfo.org/glycan/G61906ER" denotes All
GlycanIUPAC_T33 308-311 "http://rdf.glycoinfo.org/glycan/G68723GR" denotes All
GlycanIUPAC_T34 308-311 "http://rdf.glycoinfo.org/glycan/G19540LE" denotes All
GlycanIUPAC_T35 308-311 "http://rdf.glycoinfo.org/glycan/G74944PO" denotes All
GlycanIUPAC_T36 308-311 "http://rdf.glycoinfo.org/glycan/G89489ZJ" denotes All
GlycanIUPAC_T37 308-311 "http://rdf.glycoinfo.org/glycan/G04434YU" denotes All
GlycanIUPAC_T38 308-311 "http://rdf.glycoinfo.org/glycan/G21450PB" denotes All
GlycanIUPAC_T39 308-311 "http://rdf.glycoinfo.org/glycan/G93629QY" denotes All
GlycanIUPAC_T40 308-311 "http://rdf.glycoinfo.org/glycan/G02603TR" denotes All
GlycanIUPAC_T41 308-311 "http://rdf.glycoinfo.org/glycan/G40280JP" denotes All
GlycanIUPAC_T42 308-311 "http://rdf.glycoinfo.org/glycan/G95259IC" denotes All
GlycanIUPAC_T43 308-311 "http://rdf.glycoinfo.org/glycan/G26900FE" denotes All
GlycanIUPAC_T44 308-311 "http://rdf.glycoinfo.org/glycan/G21346KK" denotes All
GlycanIUPAC_T45 308-311 "http://rdf.glycoinfo.org/glycan/G62509FF" denotes All
GlycanIUPAC_T46 308-311 "http://rdf.glycoinfo.org/glycan/G83932AK" denotes All
GlycanIUPAC_T47 308-311 "http://rdf.glycoinfo.org/glycan/G96978IB" denotes All
GlycanIUPAC_T48 308-311 "http://rdf.glycoinfo.org/glycan/G34275DN" denotes All
GlycanIUPAC_T49 308-311 "http://rdf.glycoinfo.org/glycan/G07071JF" denotes All
GlycanIUPAC_T50 308-311 "http://rdf.glycoinfo.org/glycan/G80639QD" denotes All
GlycanIUPAC_T51 308-311 "http://rdf.glycoinfo.org/glycan/G99460PJ" denotes All
GlycanIUPAC_T52 308-311 "http://rdf.glycoinfo.org/glycan/G22024BZ" denotes All
GlycanIUPAC_T53 308-311 "http://rdf.glycoinfo.org/glycan/G74097ZY" denotes All
GlycanIUPAC_T54 308-311 "http://rdf.glycoinfo.org/glycan/G84439YP" denotes All
GlycanIUPAC_T55 308-311 "http://rdf.glycoinfo.org/glycan/G52207WQ" denotes All
GlycanIUPAC_T56 308-311 "http://rdf.glycoinfo.org/glycan/G90695MS" denotes All
GlycanIUPAC_T57 308-311 "http://rdf.glycoinfo.org/glycan/G50398QX" denotes All
GlycanIUPAC_T58 308-311 "http://rdf.glycoinfo.org/glycan/G12166ZT" denotes All
GlycanIUPAC_T59 308-311 "http://rdf.glycoinfo.org/glycan/G48368BR" denotes All
GlycanIUPAC_T60 308-311 "http://rdf.glycoinfo.org/glycan/G57407RW" denotes All
GlycanIUPAC_T61 308-311 "http://rdf.glycoinfo.org/glycan/G00386TY" denotes All
GlycanIUPAC_T62 308-311 "http://rdf.glycoinfo.org/glycan/G18723JK" denotes All
GlycanIUPAC_T63 308-311 "http://rdf.glycoinfo.org/glycan/G93757OR" denotes All
GlycanIUPAC_T64 308-311 "http://rdf.glycoinfo.org/glycan/G29006SI" denotes All
GlycanIUPAC_T65 308-311 "http://rdf.glycoinfo.org/glycan/G03099OQ" denotes All
GlycanIUPAC_T66 308-311 "http://rdf.glycoinfo.org/glycan/G53739OW" denotes All
GlycanIUPAC_T67 308-311 "http://rdf.glycoinfo.org/glycan/G70440ZO" denotes All
GlycanIUPAC_T68 308-311 "http://rdf.glycoinfo.org/glycan/G29951RR" denotes All
GlycanIUPAC_T69 308-311 "http://rdf.glycoinfo.org/glycan/G58402TI" denotes All
GlycanIUPAC_T70 308-311 "http://rdf.glycoinfo.org/glycan/G39875TP" denotes All
GlycanIUPAC_T71 308-311 "http://rdf.glycoinfo.org/glycan/G83439QV" denotes All
GlycanIUPAC_T72 308-311 "http://rdf.glycoinfo.org/glycan/G41762RC" denotes All
GlycanIUPAC_T73 308-311 "http://rdf.glycoinfo.org/glycan/G91604UI" denotes All
GlycanIUPAC_T74 308-311 "http://rdf.glycoinfo.org/glycan/G88447WE" denotes All
GlycanIUPAC_T75 308-311 "http://rdf.glycoinfo.org/glycan/G93634BS" denotes All
GlycanIUPAC_T76 308-311 "http://rdf.glycoinfo.org/glycan/G02587BH" denotes All
GlycanIUPAC_T77 308-311 "http://rdf.glycoinfo.org/glycan/G43511MX" denotes All
GlycanIUPAC_T78 308-311 "http://rdf.glycoinfo.org/glycan/G64958DH" denotes All
GlycanIUPAC_T79 308-311 "http://rdf.glycoinfo.org/glycan/G30384TR" denotes All
GlycanIUPAC_T80 308-311 "http://rdf.glycoinfo.org/glycan/G15624EX" denotes All
GlycanIUPAC_T81 308-311 "http://rdf.glycoinfo.org/glycan/G22706ST" denotes All
GlycanIUPAC_T82 308-311 "http://rdf.glycoinfo.org/glycan/G57408PI" denotes All
GlycanIUPAC_T83 308-311 "http://rdf.glycoinfo.org/glycan/G86403XX" denotes All
GlycanIUPAC_T84 308-311 "http://rdf.glycoinfo.org/glycan/G78043YB" denotes All
GlycanIUPAC_T85 308-311 "http://rdf.glycoinfo.org/glycan/G18952JK" denotes All
GlycanIUPAC_T86 308-311 "http://rdf.glycoinfo.org/glycan/G49020ND" denotes All
GlycanIUPAC_T87 308-311 "http://rdf.glycoinfo.org/glycan/G63590YW" denotes All
GlycanIUPAC_T88 308-311 "http://rdf.glycoinfo.org/glycan/G22793KS" denotes All
GlycanIUPAC_T89 308-311 "http://rdf.glycoinfo.org/glycan/G64134SS" denotes All
GlycanIUPAC_T90 308-311 "http://rdf.glycoinfo.org/glycan/G17338HY" denotes All
GlycanIUPAC_T91 308-311 "http://rdf.glycoinfo.org/glycan/G99745XF" denotes All
GlycanIUPAC_T92 308-311 "http://rdf.glycoinfo.org/glycan/G27782HN" denotes All
GlycanIUPAC_T93 308-311 "http://rdf.glycoinfo.org/glycan/G57496DC" denotes All
GlycanIUPAC_T94 308-311 "http://rdf.glycoinfo.org/glycan/G93169WB" denotes All
GlycanIUPAC_T95 308-311 "http://rdf.glycoinfo.org/glycan/G05518TD" denotes All
GlycanIUPAC_T96 308-311 "http://rdf.glycoinfo.org/glycan/G62603DN" denotes All
GlycanIUPAC_T97 308-311 "http://rdf.glycoinfo.org/glycan/G59574FS" denotes All
GlycanIUPAC_T98 308-311 "http://rdf.glycoinfo.org/glycan/G47567WC" denotes All
GlycanIUPAC_T99 984-987 "http://rdf.glycoinfo.org/glycan/G19151BJ" denotes Man
GlycanIUPAC_T100 984-987 "http://rdf.glycoinfo.org/glycan/G63727IH" denotes Man
GlycanIUPAC_T101 984-987 "http://rdf.glycoinfo.org/glycan/G05795KA" denotes Man
GlycanIUPAC_T102 984-987 "http://rdf.glycoinfo.org/glycan/G90812SJ" denotes Man
GlycanIUPAC_T103 984-987 "http://rdf.glycoinfo.org/glycan/G07124DB" denotes Man
GlycanIUPAC_T104 984-987 "http://rdf.glycoinfo.org/glycan/G20567HS" denotes Man
GlycanIUPAC_T105 984-987 "http://rdf.glycoinfo.org/glycan/G76159WX" denotes Man
GlycanIUPAC_T106 984-987 "http://rdf.glycoinfo.org/glycan/G40623UW" denotes Man
GlycanIUPAC_T107 984-987 "http://rdf.glycoinfo.org/glycan/G06447MP" denotes Man
GlycanIUPAC_T108 984-987 "http://rdf.glycoinfo.org/glycan/G62764VZ" denotes Man
GlycanIUPAC_T109 984-987 "http://rdf.glycoinfo.org/glycan/G21434YY" denotes Man
GlycanIUPAC_T110 984-987 "http://rdf.glycoinfo.org/glycan/G34267PK" denotes Man
GlycanIUPAC_T111 984-987 "http://rdf.glycoinfo.org/glycan/G30235PC" denotes Man
GlycanIUPAC_T112 984-987 "http://rdf.glycoinfo.org/glycan/G34820UC" denotes Man
GlycanIUPAC_T113 984-987 "http://rdf.glycoinfo.org/glycan/G95531HX" denotes Man
GlycanIUPAC_T114 984-987 "http://rdf.glycoinfo.org/glycan/G74672YG" denotes Man
GlycanIUPAC_T115 984-987 "http://rdf.glycoinfo.org/glycan/G54440FW" denotes Man
GlycanIUPAC_T116 984-987 "http://rdf.glycoinfo.org/glycan/G69182II" denotes Man
GlycanIUPAC_T117 984-987 "http://rdf.glycoinfo.org/glycan/G68961XX" denotes Man
GlycanIUPAC_T118 984-987 "http://rdf.glycoinfo.org/glycan/G11710CQ" denotes Man
GlycanIUPAC_T119 984-987 "http://rdf.glycoinfo.org/glycan/G70765DS" denotes Man
GlycanIUPAC_T120 984-987 "http://rdf.glycoinfo.org/glycan/G51661YR" denotes Man
GlycanIUPAC_T121 984-987 "http://rdf.glycoinfo.org/glycan/G18477VG" denotes Man
GlycanIUPAC_T122 984-987 "http://rdf.glycoinfo.org/glycan/G12337MH" denotes Man
GlycanIUPAC_T123 984-987 "http://rdf.glycoinfo.org/glycan/G40783MY" denotes Man
GlycanIUPAC_T124 984-987 "http://rdf.glycoinfo.org/glycan/G72867LN" denotes Man
GlycanIUPAC_T125 984-987 "http://rdf.glycoinfo.org/glycan/G79061OT" denotes Man
GlycanIUPAC_T126 984-987 "http://rdf.glycoinfo.org/glycan/G45970UX" denotes Man
GlycanIUPAC_T127 984-987 "http://rdf.glycoinfo.org/glycan/G93661NW" denotes Man
GlycanIUPAC_T128 984-987 "http://rdf.glycoinfo.org/glycan/G04988XL" denotes Man
GlycanIUPAC_T129 984-987 "http://rdf.glycoinfo.org/glycan/G85800UH" denotes Man
GlycanIUPAC_T130 984-987 "http://rdf.glycoinfo.org/glycan/G96338GZ" denotes Man
GlycanIUPAC_T131 984-987 "http://rdf.glycoinfo.org/glycan/G96296PU" denotes Man
GlycanIUPAC_T132 984-987 "http://rdf.glycoinfo.org/glycan/G59124WZ" denotes Man
GlycanIUPAC_T133 984-987 "http://rdf.glycoinfo.org/glycan/G57275GR" denotes Man
GlycanIUPAC_T134 984-987 "http://rdf.glycoinfo.org/glycan/G46105MZ" denotes Man
GlycanIUPAC_T135 984-987 "http://rdf.glycoinfo.org/glycan/G76001GO" denotes Man
GlycanIUPAC_T136 984-987 "http://rdf.glycoinfo.org/glycan/G89599ML" denotes Man
GlycanIUPAC_T137 984-987 "http://rdf.glycoinfo.org/glycan/G85872BD" denotes Man
GlycanIUPAC_T138 984-987 "http://rdf.glycoinfo.org/glycan/G69460YK" denotes Man
GlycanIUPAC_T139 984-987 "http://rdf.glycoinfo.org/glycan/G25240JV" denotes Man
GlycanIUPAC_T140 984-987 "http://rdf.glycoinfo.org/glycan/G80489OS" denotes Man
GlycanIUPAC_T141 984-987 "http://rdf.glycoinfo.org/glycan/G35726XK" denotes Man
GlycanIUPAC_T142 984-987 "http://rdf.glycoinfo.org/glycan/G11002JA" denotes Man
GlycanIUPAC_T143 984-987 "http://rdf.glycoinfo.org/glycan/G85388FO" denotes Man
GlycanIUPAC_T144 984-987 "http://rdf.glycoinfo.org/glycan/G20221JL" denotes Man
GlycanIUPAC_T145 984-987 "http://rdf.glycoinfo.org/glycan/G39026SP" denotes Man
GlycanIUPAC_T146 984-987 "http://rdf.glycoinfo.org/glycan/G66979UZ" denotes Man
GlycanIUPAC_T147 984-987 "http://rdf.glycoinfo.org/glycan/G68566EA" denotes Man
GlycanIUPAC_T148 984-987 "http://rdf.glycoinfo.org/glycan/G20255ZD" denotes Man
GlycanIUPAC_T149 984-987 "http://rdf.glycoinfo.org/glycan/G68860MF" denotes Man
GlycanIUPAC_T150 984-987 "http://rdf.glycoinfo.org/glycan/G50413KD" denotes Man
GlycanIUPAC_T151 1797-1802 "http://rdf.glycoinfo.org/glycan/G59665TO" denotes sugar
GlycanIUPAC_T152 1797-1802 "http://rdf.glycoinfo.org/glycan/G32915EI" denotes sugar
GlycanIUPAC_T153 1797-1802 "http://rdf.glycoinfo.org/glycan/G60625TS" denotes sugar

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 1463-1468 http://purl.obolibrary.org/obo/UBERON_0002542 denotes scale

Lectin-Jamboree-Sentence

Id Subject Object Predicate Lexical cue
T1 0-128 Sentence denotes Structural basis of the affinity for oligomannosides and analogs displayed by BC2L-A, a Burkholderia cenocepacia soluble lectin.
T2 129-307 Sentence denotes The opportunistic pathogen Burkholderia cenocepacia contains three soluble carbohydrate-binding proteins, related to the fucose-binding lectin PA-IIL from Pseudomonas aeruginosa.
T3 308-453 Sentence denotes All contain a PA-IIL-like domain and two of them have an additional N-terminal domain that displays no sequence similarities with known proteins.
T4 454-735 Sentence denotes Printed arrays screening performed on the shortest one, B. cenocepacia lectin A (BC2L-A), demonstrated the strict specificity for oligomannose-type N-glycan structures (Lameignere E, Malinovská L, Sláviková M, Duchaud E, Mitchell EP, Varrot A, Sedo O, Imberty A, Wimmerová M. 2008.
T5 736-842 Sentence denotes Structural basis for mannose recognition by a lectin from opportunistic bacteria Burkholderia cenocepacia.
T6 843-868 Sentence denotes Biochem J. 411:307-318.).
T7 869-1143 Sentence denotes The disaccharides alphaMan1-2Man, alphaMan1-3Man, and alphaMan1-6Man and the trisaccharide alphaMan1-3(alphaMan1-6)Man were tested by titration microcalorimetry in order to evaluate their affinity for BC2L-A in solution and to characterize the thermodynamics of the binding.
T8 1144-1261 Sentence denotes Oligomannose analogs presenting two mannoside residues separated by either flexible or rigid spacer were also tested.
T9 1262-1469 Sentence denotes Only the rigid one yields to high affinity binding with a fast kinetics of clustering, while the flexible analog and the trimannoside display moderate affinities and no clustering effect on short time scale.
T10 1470-1612 Sentence denotes The crystal structures of BC2L-A have been obtained in complex with alphaMan1-3Man disaccharide and alphaMan1(alphaMan1-6)-3Man trisaccharide.
T11 1613-1879 Sentence denotes The lengthy time required for the co-crystallization with the trisaccharide allowed for the formation of cluster since in the BC2L-A-trimannose complex solved at 1.1 A resolution, the sugar creates a bridge between two adjacent dimers, yielding to molecular strings.
T12 1880-1994 Sentence denotes AFM experiments were performed in order to visualize the filaments formed in solution by this type of interaction.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 88-112 OrganismTaxon denotes Burkholderia cenocepacia 95486
T2 156-180 OrganismTaxon denotes Burkholderia cenocepacia 95486
T3 284-306 OrganismTaxon denotes Pseudomonas aeruginosa 287
T4 808-816 OrganismTaxon denotes bacteria 2|629395
T6 817-841 OrganismTaxon denotes Burkholderia cenocepacia 95486

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1463-1468 Body_part denotes scale http://purl.obolibrary.org/obo/UBERON_0002542