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PubMed:19592582 JSONTXT

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TEST-DiseaseOrPhenotypicFeature

Id Subject Object Predicate Lexical cue #label
T1 26-64 DiseaseOrPhenotypicFeature denotes iron-refractory iron deficiency anemia C562385
T2 234-272 DiseaseOrPhenotypicFeature denotes iron-refractory iron deficiency anemia C562385
T3 274-279 DiseaseOrPhenotypicFeature denotes IRIDA D018798
T4 443-448 DiseaseOrPhenotypicFeature denotes IRIDA D018798
T5 1220-1225 DiseaseOrPhenotypicFeature denotes IRIDA D018798
T6 1402-1417 DiseaseOrPhenotypicFeature denotes iron deficiency D000090463

TEST-ChemicalEntity

Id Subject Object Predicate Lexical cue ID:
T1 0-12 ChemicalEntity denotes Matriptase-2 C467801
T2 26-30 ChemicalEntity denotes iron D007501|http://purl.obolibrary.org/obo/CHEBI_18248
T4 42-46 ChemicalEntity denotes iron D007501|http://purl.obolibrary.org/obo/CHEBI_18248
T6 100-108 ChemicalEntity denotes protease D010447
T7 167-179 ChemicalEntity denotes matriptase-2 C467801
T8 234-238 ChemicalEntity denotes iron D007501|http://purl.obolibrary.org/obo/CHEBI_18248
T10 250-254 ChemicalEntity denotes iron D007501|http://purl.obolibrary.org/obo/CHEBI_18248
T12 375-387 ChemicalEntity denotes matriptase-2 C467801
T13 653-659 ChemicalEntity denotes serine http://purl.obolibrary.org/obo/CHEBI_17822
T14 841-853 ChemicalEntity denotes matriptase-2 C467801
T15 891-903 ChemicalEntity denotes matriptase-2 C467801
T16 904-913 ChemicalEntity denotes proteases D010447
T17 937-941 ChemicalEntity denotes lead D007854
T18 1111-1123 ChemicalEntity denotes matriptase-2 C467801
T19 1280-1288 ChemicalEntity denotes protease D010447
T20 1382-1394 ChemicalEntity denotes matriptase-2 C467801
T21 1402-1406 ChemicalEntity denotes iron D007501|http://purl.obolibrary.org/obo/CHEBI_18248

TEST-OrganismTaxon

Id Subject Object Predicate Lexical cue
T1 65-73 OrganismTaxon denotes patients
T2 204-210 OrganismTaxon denotes humans
T3 610-619 OrganismTaxon denotes terminate

Test-SequenceVariant

Id Subject Object Predicate Lexical cue
T1 498-504 SequenceVariant denotes P686fs
T2 576-587 SequenceVariant denotes 2173insCCCC
T3 715-723 SequenceVariant denotes c.467C>A
T4 728-736 SequenceVariant denotes c.468C>T
T5 781-786 SequenceVariant denotes A118D
T6 1025-1030 SequenceVariant denotes A118D

Test-GeneOrGeneProduct

Id Subject Object Predicate Lexical cue
T1 0-12 GeneOrGeneProduct denotes Matriptase-2
T2 100-108 GeneOrGeneProduct denotes protease
T3 167-179 GeneOrGeneProduct denotes matriptase-2
T4 274-279 GeneOrGeneProduct denotes IRIDA
T5 297-305 GeneOrGeneProduct denotes hepcidin
T6 375-387 GeneOrGeneProduct denotes matriptase-2
T7 389-396 GeneOrGeneProduct denotes TMPRSS6
T8 443-448 GeneOrGeneProduct denotes IRIDA
T9 794-804 GeneOrGeneProduct denotes SEA domain
T10 841-853 GeneOrGeneProduct denotes matriptase-2
T11 891-903 GeneOrGeneProduct denotes matriptase-2
T12 972-980 GeneOrGeneProduct denotes hepcidin
T13 1031-1041 GeneOrGeneProduct denotes SEA domain
T14 1111-1123 GeneOrGeneProduct denotes matriptase-2
T15 1186-1193 GeneOrGeneProduct denotes TMPRSS6
T16 1220-1225 GeneOrGeneProduct denotes IRIDA
T17 1280-1288 GeneOrGeneProduct denotes protease
T18 1382-1394 GeneOrGeneProduct denotes matriptase-2

Test-merged-2

Id Subject Object Predicate Lexical cue #label ID:
T42467 498-504 SequenceVariant denotes P686fs
T93637 576-587 SequenceVariant denotes 2173insCCCC
T85689 715-723 SequenceVariant denotes c.467C>A
T18929 728-736 SequenceVariant denotes c.468C>T
T92470 781-786 SequenceVariant denotes A118D
T37174 1025-1030 SequenceVariant denotes A118D
T34198 0-12 ChemicalEntity denotes Matriptase-2 C467801
T20331 26-30 ChemicalEntity denotes iron D007501|http://purl.obolibrary.org/obo/CHEBI_18248
T12864 42-46 ChemicalEntity denotes iron D007501|http://purl.obolibrary.org/obo/CHEBI_18248
T25850 100-108 ChemicalEntity denotes protease D010447
T95867 167-179 ChemicalEntity denotes matriptase-2 C467801
T39453 234-238 ChemicalEntity denotes iron D007501|http://purl.obolibrary.org/obo/CHEBI_18248
T13962 250-254 ChemicalEntity denotes iron D007501|http://purl.obolibrary.org/obo/CHEBI_18248
T9319 375-387 ChemicalEntity denotes matriptase-2 C467801
T14229 653-659 ChemicalEntity denotes serine http://purl.obolibrary.org/obo/CHEBI_17822
T84823 841-853 ChemicalEntity denotes matriptase-2 C467801
T83818 891-903 ChemicalEntity denotes matriptase-2 C467801
T63977 904-913 ChemicalEntity denotes proteases D010447
T77319 937-941 ChemicalEntity denotes lead D007854
T95114 1111-1123 ChemicalEntity denotes matriptase-2 C467801
T19 1280-1288 ChemicalEntity denotes protease D010447
T20 1382-1394 ChemicalEntity denotes matriptase-2 C467801
T21 1402-1406 ChemicalEntity denotes iron D007501|http://purl.obolibrary.org/obo/CHEBI_18248
T1877 0-12 GeneOrGeneProduct denotes Matriptase-2
T28560 100-108 GeneOrGeneProduct denotes protease
T31531 167-179 GeneOrGeneProduct denotes matriptase-2
T34906 274-279 GeneOrGeneProduct denotes IRIDA
T48657 297-305 GeneOrGeneProduct denotes hepcidin
T68637 375-387 GeneOrGeneProduct denotes matriptase-2
T7 389-396 GeneOrGeneProduct denotes TMPRSS6
T8 443-448 GeneOrGeneProduct denotes IRIDA
T9 794-804 GeneOrGeneProduct denotes SEA domain
T10 841-853 GeneOrGeneProduct denotes matriptase-2
T11 891-903 GeneOrGeneProduct denotes matriptase-2
T12 972-980 GeneOrGeneProduct denotes hepcidin
T13 1031-1041 GeneOrGeneProduct denotes SEA domain
T14 1111-1123 GeneOrGeneProduct denotes matriptase-2
T15 1186-1193 GeneOrGeneProduct denotes TMPRSS6
T16 1220-1225 GeneOrGeneProduct denotes IRIDA
T17 1280-1288 GeneOrGeneProduct denotes protease
T18 1382-1394 GeneOrGeneProduct denotes matriptase-2
T89364 65-73 OrganismTaxon denotes patients
T20232 204-210 OrganismTaxon denotes humans
T41703 610-619 OrganismTaxon denotes terminate
T1 26-64 DiseaseOrPhenotypicFeature denotes iron-refractory iron deficiency anemia C562385
T2 234-272 DiseaseOrPhenotypicFeature denotes iron-refractory iron deficiency anemia C562385
T3 274-279 DiseaseOrPhenotypicFeature denotes IRIDA D018798
T4 443-448 DiseaseOrPhenotypicFeature denotes IRIDA D018798
T5 1220-1225 DiseaseOrPhenotypicFeature denotes IRIDA D018798
T6 1402-1417 DiseaseOrPhenotypicFeature denotes iron deficiency D000090463

DisGeNET

Id Subject Object Predicate Lexical cue
T0 0-12 gene:164656 denotes Matriptase-2
T1 26-64 disease:C0085576 denotes iron-refractory iron deficiency anemia
T2 167-179 gene:164656 denotes matriptase-2
T3 234-272 disease:C0085576 denotes iron-refractory iron deficiency anemia
T4 167-179 gene:164656 denotes matriptase-2
T5 274-279 disease:C0085576 denotes IRIDA
T6 297-305 gene:57817 denotes hepcidin
T7 274-279 disease:C0085576 denotes IRIDA
T8 297-305 gene:57817 denotes hepcidin
T9 234-272 disease:C0085576 denotes iron-refractory iron deficiency anemia
T10 389-396 gene:164656 denotes TMPRSS6
T11 443-448 disease:C0085576 denotes IRIDA
T12 375-387 gene:164656 denotes matriptase-2
T13 443-448 disease:C0085576 denotes IRIDA
T14 1186-1193 gene:164656 denotes TMPRSS6
T15 1220-1225 disease:C0085576 denotes IRIDA
T16 1186-1193 gene:164656 denotes TMPRSS6
T17 1402-1417 disease:C0240066 denotes iron deficiency
T18 1382-1394 gene:164656 denotes matriptase-2
T19 1220-1225 disease:C0085576 denotes IRIDA
T20 1382-1394 gene:164656 denotes matriptase-2
T21 1402-1417 disease:C0240066 denotes iron deficiency
R1 T0 T1 associated_with Matriptase-2,iron-refractory iron deficiency anemia
R2 T2 T3 associated_with matriptase-2,iron-refractory iron deficiency anemia
R3 T4 T5 associated_with matriptase-2,IRIDA
R4 T6 T7 associated_with hepcidin,IRIDA
R5 T8 T9 associated_with hepcidin,iron-refractory iron deficiency anemia
R6 T10 T11 associated_with TMPRSS6,IRIDA
R7 T12 T13 associated_with matriptase-2,IRIDA
R8 T14 T15 associated_with TMPRSS6,IRIDA
R9 T16 T17 associated_with TMPRSS6,iron deficiency
R10 T18 T19 associated_with matriptase-2,IRIDA
R11 T20 T21 associated_with matriptase-2,iron deficiency

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
19592582-0#0#12#gene164656 0-12 gene164656 denotes Matriptase-2
19592582-0#26#64#diseaseC0085576 26-64 diseaseC0085576 denotes iron-refractory iron deficiency anemia
19592582-1#165#173#gene57817 297-305 gene57817 denotes hepcidin
19592582-1#102#140#diseaseC0085576 234-272 diseaseC0085576 denotes iron-refractory iron deficiency anemia
19592582-1#142#147#diseaseC0085576 274-279 diseaseC0085576 denotes IRIDA
19592582-7#50#57#gene164656 1186-1193 gene164656 denotes TMPRSS6
19592582-7#246#258#gene164656 1382-1394 gene164656 denotes matriptase-2
19592582-7#266#281#diseaseC0240066 1402-1417 diseaseC0240066 denotes iron deficiency
0#12#gene16465626#64#diseaseC0085576 19592582-0#0#12#gene164656 19592582-0#26#64#diseaseC0085576 associated_with Matriptase-2,iron-refractory iron deficiency anemia
165#173#gene57817102#140#diseaseC0085576 19592582-1#165#173#gene57817 19592582-1#102#140#diseaseC0085576 associated_with hepcidin,iron-refractory iron deficiency anemia
165#173#gene57817142#147#diseaseC0085576 19592582-1#165#173#gene57817 19592582-1#142#147#diseaseC0085576 associated_with hepcidin,IRIDA
50#57#gene164656266#281#diseaseC0240066 19592582-7#50#57#gene164656 19592582-7#266#281#diseaseC0240066 associated_with TMPRSS6,iron deficiency
246#258#gene164656266#281#diseaseC0240066 19592582-7#246#258#gene164656 19592582-7#266#281#diseaseC0240066 associated_with matriptase-2,iron deficiency

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 498-504 ProteinMutation:p|FS|P|686|| denotes P686fs
T2 571-587 DNAMutation:c|INS|2172_2173|CCCC denotes 2172_2173insCCCC
T3 715-723 DNAMutation:c|SUB|C|467|A denotes c.467C>A
T4 728-736 DNAMutation:c|SUB|C|468|T denotes c.468C>T
T5 781-786 ProteinMutation:p|SUB|A|118|D denotes A118D
T6 1025-1030 ProteinMutation:p|SUB|A|118|D denotes A118D