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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 1238-1245 https://glytoucan.org/Structures/Glycans/G00021MO denotes Heparin
T2 1238-1245 https://glytoucan.org/Structures/Glycans/G54161DR denotes Heparin
T3 1474-1481 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T4 1474-1481 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 1238-1245 Glycan_Motif denotes Heparin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54161DR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00021MO
T3 1474-1481 Glycan_Motif denotes heparin https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G54161DR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00021MO

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 1238-1245 https://glytoucan.org/Structures/Glycans/G00021MO denotes Heparin
T2 1238-1245 https://glytoucan.org/Structures/Glycans/G54161DR denotes Heparin
T3 1474-1481 https://glytoucan.org/Structures/Glycans/G00021MO denotes heparin
T4 1474-1481 https://glytoucan.org/Structures/Glycans/G54161DR denotes heparin

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-145 Sentence denotes Sulfated polysaccharides from marine sponges (Porifera): an ancestor cell-cell adhesion event based on the carbohydrate-carbohydrate interaction.
TextSentencer_T2 146-207 Sentence denotes Marine sponges (Porifera) are ancient and simple eumetazoans.
TextSentencer_T3 208-297 Sentence denotes They constitute key organisms in the evolution from unicellular to multicellular animals.
TextSentencer_T4 298-459 Sentence denotes We now demonstrated that pure sulfated polysaccharides from marine sponges are responsible for the species-specific cell-cell interaction in these invertebrates.
TextSentencer_T5 460-1128 Sentence denotes This conclusion was based on the following observations: (1) each species of marine sponge has a single population of sulfated polysaccharide, which differ among the species in their sugar composition and sulfate content; (2) sulfated polysaccharides from sponge interact with each other in a species-specific way, as indicated by an affinity chromatography assay, and this interaction requires calcium; (3) homologous, but not heterologous, sulfated polysaccharide inhibits aggregation of dissociated sponge cells; (4) we also observed a parallel between synthesis of the sulfated polysaccharide and formation of large aggregates of sponge cells, known as primmorphs.
TextSentencer_T6 1129-1237 Sentence denotes Once aggregation reached a plateau, the demand for the de novo synthesis of sulfated polysaccharides ceased.
TextSentencer_T7 1238-1395 Sentence denotes Heparin can mimic the homologous sulfated polysaccharide on the in vitro interaction and also as an inhibitor of aggregation of the dissociated sponge cells.
TextSentencer_T8 1396-1515 Sentence denotes However, this observation is not relevant for the biology of the sponge since heparin is not found in the invertebrate.
TextSentencer_T9 1516-1664 Sentence denotes In conclusion, marine sponges display an ancestor event of cell-cell adhesion, based on the calcium-dependent carbohydrate-carbohydrate interaction.
T1 0-145 Sentence denotes Sulfated polysaccharides from marine sponges (Porifera): an ancestor cell-cell adhesion event based on the carbohydrate-carbohydrate interaction.
T2 146-207 Sentence denotes Marine sponges (Porifera) are ancient and simple eumetazoans.
T3 208-297 Sentence denotes They constitute key organisms in the evolution from unicellular to multicellular animals.
T4 298-459 Sentence denotes We now demonstrated that pure sulfated polysaccharides from marine sponges are responsible for the species-specific cell-cell interaction in these invertebrates.
T5 460-1128 Sentence denotes This conclusion was based on the following observations: (1) each species of marine sponge has a single population of sulfated polysaccharide, which differ among the species in their sugar composition and sulfate content; (2) sulfated polysaccharides from sponge interact with each other in a species-specific way, as indicated by an affinity chromatography assay, and this interaction requires calcium; (3) homologous, but not heterologous, sulfated polysaccharide inhibits aggregation of dissociated sponge cells; (4) we also observed a parallel between synthesis of the sulfated polysaccharide and formation of large aggregates of sponge cells, known as primmorphs.
T6 1129-1237 Sentence denotes Once aggregation reached a plateau, the demand for the de novo synthesis of sulfated polysaccharides ceased.
T7 1238-1395 Sentence denotes Heparin can mimic the homologous sulfated polysaccharide on the in vitro interaction and also as an inhibitor of aggregation of the dissociated sponge cells.
T8 1396-1515 Sentence denotes However, this observation is not relevant for the biology of the sponge since heparin is not found in the invertebrate.
T9 1516-1664 Sentence denotes In conclusion, marine sponges display an ancestor event of cell-cell adhesion, based on the calcium-dependent carbohydrate-carbohydrate interaction.
T1 0-145 Sentence denotes Sulfated polysaccharides from marine sponges (Porifera): an ancestor cell-cell adhesion event based on the carbohydrate-carbohydrate interaction.
T2 146-207 Sentence denotes Marine sponges (Porifera) are ancient and simple eumetazoans.
T3 208-297 Sentence denotes They constitute key organisms in the evolution from unicellular to multicellular animals.
T4 298-459 Sentence denotes We now demonstrated that pure sulfated polysaccharides from marine sponges are responsible for the species-specific cell-cell interaction in these invertebrates.
T5 460-1128 Sentence denotes This conclusion was based on the following observations: (1) each species of marine sponge has a single population of sulfated polysaccharide, which differ among the species in their sugar composition and sulfate content; (2) sulfated polysaccharides from sponge interact with each other in a species-specific way, as indicated by an affinity chromatography assay, and this interaction requires calcium; (3) homologous, but not heterologous, sulfated polysaccharide inhibits aggregation of dissociated sponge cells; (4) we also observed a parallel between synthesis of the sulfated polysaccharide and formation of large aggregates of sponge cells, known as primmorphs.
T6 1129-1237 Sentence denotes Once aggregation reached a plateau, the demand for the de novo synthesis of sulfated polysaccharides ceased.
T7 1238-1395 Sentence denotes Heparin can mimic the homologous sulfated polysaccharide on the in vitro interaction and also as an inhibitor of aggregation of the dissociated sponge cells.
T8 1396-1515 Sentence denotes However, this observation is not relevant for the biology of the sponge since heparin is not found in the invertebrate.
T9 1516-1664 Sentence denotes In conclusion, marine sponges display an ancestor event of cell-cell adhesion, based on the calcium-dependent carbohydrate-carbohydrate interaction.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 445-458 http://purl.obolibrary.org/obo/MAT_0000374 denotes invertebrates
T2 1502-1514 http://purl.obolibrary.org/obo/MAT_0000374 denotes invertebrate

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 9-24 FMAID:196779 denotes polysaccharides
_T2 9-24 FMAID:82785 denotes polysaccharides
_T3 9-24 FMAID:82746 denotes polysaccharides
_T4 9-24 FMAID:196735 denotes polysaccharides
_T5 107-119 FMAID:197276 denotes carbohydrate
_T6 107-119 FMAID:82737 denotes carbohydrate
_T7 120-132 FMAID:82737 denotes carbohydrate
_T8 120-132 FMAID:197276 denotes carbohydrate
_T9 228-237 FMAID:67498 denotes organisms
_T10 228-237 FMAID:166081 denotes organisms
_T11 337-352 FMAID:196735 denotes polysaccharides
_T12 337-352 FMAID:82746 denotes polysaccharides
_T13 337-352 FMAID:82785 denotes polysaccharides
_T14 337-352 FMAID:196779 denotes polysaccharides
_T15 587-601 FMAID:82785 denotes polysaccharide
_T16 587-601 FMAID:196779 denotes polysaccharide
_T17 587-601 FMAID:196735 denotes polysaccharide
_T18 587-601 FMAID:82746 denotes polysaccharide
_T19 643-648 FMAID:196724 denotes sugar
_T20 649-660 FMAID:50603 denotes composition
_T21 649-660 FMAID:146309 denotes composition
_T22 695-710 FMAID:82746 denotes polysaccharides
_T23 695-710 FMAID:82785 denotes polysaccharides
_T24 695-710 FMAID:196779 denotes polysaccharides
_T25 695-710 FMAID:196735 denotes polysaccharides
_T26 911-925 FMAID:196735 denotes polysaccharide
_T27 911-925 FMAID:82746 denotes polysaccharide
_T28 911-925 FMAID:82785 denotes polysaccharide
_T29 911-925 FMAID:196779 denotes polysaccharide
_T30 969-974 FMAID:68646 denotes cells
_T31 969-974 FMAID:169002 denotes cells
_T32 1042-1056 FMAID:82785 denotes polysaccharide
_T33 1042-1056 FMAID:82746 denotes polysaccharide
_T34 1042-1056 FMAID:196735 denotes polysaccharide
_T35 1042-1056 FMAID:196779 denotes polysaccharide
_T36 1101-1106 FMAID:68646 denotes cells
_T37 1101-1106 FMAID:169002 denotes cells
_T38 1214-1229 FMAID:82746 denotes polysaccharides
_T39 1214-1229 FMAID:196735 denotes polysaccharides
_T40 1214-1229 FMAID:82785 denotes polysaccharides
_T41 1214-1229 FMAID:196779 denotes polysaccharides
_T42 1238-1245 FMAID:82839 denotes Heparin
_T43 1238-1245 FMAID:167420 denotes Heparin
_T44 1280-1294 FMAID:196735 denotes polysaccharide
_T45 1280-1294 FMAID:82746 denotes polysaccharide
_T46 1280-1294 FMAID:196779 denotes polysaccharide
_T47 1280-1294 FMAID:82785 denotes polysaccharide
_T48 1389-1394 FMAID:169002 denotes cells
_T49 1389-1394 FMAID:68646 denotes cells
_T50 1474-1481 FMAID:167420 denotes heparin
_T51 1474-1481 FMAID:82839 denotes heparin
_T52 1626-1638 FMAID:82737 denotes carbohydrate
_T53 1626-1638 FMAID:197276 denotes carbohydrate
_T54 1639-1651 FMAID:82737 denotes carbohydrate
_T55 1639-1651 FMAID:197276 denotes carbohydrate

uniprot-human

Id Subject Object Predicate Lexical cue
T1 1580-1600 http://www.uniprot.org/uniprot/P50895 denotes cell adhesion, based

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 88-93 http://purl.bioontology.org/ontology/STY/T051 denotes event
T2 969-974 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T3 999-1007 http://purl.bioontology.org/ontology/NCBITAXON/871272 denotes parallel
T4 1101-1106 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T5 1389-1394 http://purl.bioontology.org/ontology/STY/T025 denotes cells
T6 1566-1571 http://purl.bioontology.org/ontology/STY/T051 denotes event

GO-BP

Id Subject Object Predicate Lexical cue
T1 0-8 http://purl.obolibrary.org/obo/GO_0051923 denotes Sulfated
T2 328-336 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfated
T3 578-586 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfated
T4 686-694 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfated
T5 902-910 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfated
T6 1033-1041 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfated
T7 1205-1213 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfated
T8 665-672 http://purl.obolibrary.org/obo/GO_0051923 denotes sulfate
T9 74-87 http://purl.obolibrary.org/obo/GO_0007155 denotes cell adhesion
T10 1580-1593 http://purl.obolibrary.org/obo/GO_0007155 denotes cell adhesion
T11 323-327 http://purl.obolibrary.org/obo/GO_0034023 denotes pure
T12 1016-1025 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T13 1192-1201 http://purl.obolibrary.org/obo/GO_0009058 denotes synthesis
T14 1042-1070 http://purl.obolibrary.org/obo/GO_0000271 denotes polysaccharide and formation
T15 1061-1070 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

GO-CC

Id Subject Object Predicate Lexical cue
T1 69-73 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T2 74-78 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T3 414-418 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T4 419-423 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T5 1575-1579 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T6 969-974 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T7 1101-1106 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T8 1389-1394 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 228-237 http://purl.obolibrary.org/obo/UBERON_0000062 denotes organisms

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 69-78 http://purl.obolibrary.org/obo/MAT_0000083 denotes cell-cell
T2 414-423 http://purl.obolibrary.org/obo/MAT_0000083 denotes cell-cell
T3 445-458 http://purl.obolibrary.org/obo/MAT_0000374 denotes invertebrates
T4 1502-1514 http://purl.obolibrary.org/obo/MAT_0000374 denotes invertebrate
T5 1575-1584 http://purl.obolibrary.org/obo/MAT_0000083 denotes cell-cell

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 643-648 "http://rdf.glycoinfo.org/glycan/G59665TO" denotes sugar
GlycanIUPAC_T2 643-648 "http://rdf.glycoinfo.org/glycan/G32915EI" denotes sugar
GlycanIUPAC_T3 643-648 "http://rdf.glycoinfo.org/glycan/G60625TS" denotes sugar

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 1474-1481 http://rdf.glycoinfo.org/glycan/G54161DR denotes heparin

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 228-237 http://purl.obolibrary.org/obo/UBERON_0000062 denotes organisms

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 46-54 OrganismTaxon denotes Porifera 6040
T2 162-170 OrganismTaxon denotes Porifera 6040
T3 275-296 OrganismTaxon denotes multicellular animals 33208

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 445-458 Body_part denotes invertebrates http://purl.obolibrary.org/obo/MAT_0000374
T2 1502-1514 Body_part denotes invertebrate http://purl.obolibrary.org/obo/MAT_0000374

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 228-237 Body_part denotes organisms http://purl.obolibrary.org/obo/UBERON_0000468