PubMed:19389916
Annnotations
GlyCosmos6-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 96-105 | Body_part | denotes | platelets | http://purl.obolibrary.org/obo/CL_0000233 |
| T2 | 162-167 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T3 | 271-276 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T4 | 344-349 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T5 | 590-595 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T6 | 651-656 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T7 | 701-707 | Body_part | denotes | plasma | http://purl.obolibrary.org/obo/UBERON_0001969 |
| T8 | 740-749 | Body_part | denotes | platelets | http://purl.obolibrary.org/obo/CL_0000233 |
| T9 | 757-762 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
| T10 | 844-849 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T11 | 870-875 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
| T12 | 903-908 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T13 | 957-962 | Body_part | denotes | serum | http://purl.obolibrary.org/obo/UBERON_0001977 |
| T14 | 1054-1062 | Body_part | denotes | platelet | http://purl.obolibrary.org/obo/CL_0000233 |
| T15 | 1070-1075 | Body_part | denotes | liver | http://purl.obolibrary.org/obo/UBERON_0002107 |
PubMed_ArguminSci
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 310-511 | DRI_Background | denotes | Understanding what influences the serum activity of these enzymes as well as the sources of these enzymes is important to interpreting the significance of alterations in enzyme activity during disease. |
| T2 | 512-605 | DRI_Outcome | denotes | This article demonstrates that in the mouse and human the predominant XylT in serum is XylT2. |
| T3 | 782-924 | DRI_Outcome | denotes | In addition, the data from Xylt2 knock-out mice and mice with liver neoplasia show that liver is a significant source of serum XylT2 activity. |
| T4 | 925-1088 | DRI_Outcome | denotes | The data presented suggest that serum XylT levels may be an informative biomarker in patients who suffer from diseases affecting platelet and/or liver homeostasis. |
PMID_GLOBAL
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 850-859 | DiseaseOrPhenotypicFeature | denotes | neoplasia | 0005070 |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 757-762 | http://purl.obolibrary.org/obo/MAT_0000083 | denotes | blood |
| T2 | 757-762 | http://purl.obolibrary.org/obo/MAT_0000315 | denotes | blood |
| T3 | 844-849 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
| T4 | 870-875 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
| T5 | 1070-1075 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-168 | Sentence | denotes | Xylosyltransferase II is a significant contributor of circulating xylosyltransferase levels and platelets constitute an important source of xylosyltransferase in serum. |
| TextSentencer_T2 | 169-309 | Sentence | denotes | Circulating glycosyltransferases including xylosyltransferases I (XylT1) and II (XylT2) are potential serum biomarkers for various diseases. |
| TextSentencer_T3 | 310-511 | Sentence | denotes | Understanding what influences the serum activity of these enzymes as well as the sources of these enzymes is important to interpreting the significance of alterations in enzyme activity during disease. |
| TextSentencer_T4 | 512-605 | Sentence | denotes | This article demonstrates that in the mouse and human the predominant XylT in serum is XylT2. |
| TextSentencer_T5 | 606-781 | Sentence | denotes | Furthermore, that total XylT levels in human serum are approximately 200% higher than those in plasma due in part to XylT released by platelets during blood clotting in vitro. |
| TextSentencer_T6 | 782-924 | Sentence | denotes | In addition, the data from Xylt2 knock-out mice and mice with liver neoplasia show that liver is a significant source of serum XylT2 activity. |
| TextSentencer_T7 | 925-1088 | Sentence | denotes | The data presented suggest that serum XylT levels may be an informative biomarker in patients who suffer from diseases affecting platelet and/or liver homeostasis. |
| T1 | 0-168 | Sentence | denotes | Xylosyltransferase II is a significant contributor of circulating xylosyltransferase levels and platelets constitute an important source of xylosyltransferase in serum. |
| T2 | 169-309 | Sentence | denotes | Circulating glycosyltransferases including xylosyltransferases I (XylT1) and II (XylT2) are potential serum biomarkers for various diseases. |
| T3 | 310-511 | Sentence | denotes | Understanding what influences the serum activity of these enzymes as well as the sources of these enzymes is important to interpreting the significance of alterations in enzyme activity during disease. |
| T4 | 512-605 | Sentence | denotes | This article demonstrates that in the mouse and human the predominant XylT in serum is XylT2. |
| T5 | 606-781 | Sentence | denotes | Furthermore, that total XylT levels in human serum are approximately 200% higher than those in plasma due in part to XylT released by platelets during blood clotting in vitro. |
| T6 | 782-924 | Sentence | denotes | In addition, the data from Xylt2 knock-out mice and mice with liver neoplasia show that liver is a significant source of serum XylT2 activity. |
| T7 | 925-1088 | Sentence | denotes | The data presented suggest that serum XylT levels may be an informative biomarker in patients who suffer from diseases affecting platelet and/or liver homeostasis. |
| T1 | 0-168 | Sentence | denotes | Xylosyltransferase II is a significant contributor of circulating xylosyltransferase levels and platelets constitute an important source of xylosyltransferase in serum. |
| T2 | 169-309 | Sentence | denotes | Circulating glycosyltransferases including xylosyltransferases I (XylT1) and II (XylT2) are potential serum biomarkers for various diseases. |
| T3 | 310-511 | Sentence | denotes | Understanding what influences the serum activity of these enzymes as well as the sources of these enzymes is important to interpreting the significance of alterations in enzyme activity during disease. |
| T4 | 512-605 | Sentence | denotes | This article demonstrates that in the mouse and human the predominant XylT in serum is XylT2. |
| T5 | 606-781 | Sentence | denotes | Furthermore, that total XylT levels in human serum are approximately 200% higher than those in plasma due in part to XylT released by platelets during blood clotting in vitro. |
| T6 | 782-924 | Sentence | denotes | In addition, the data from Xylt2 knock-out mice and mice with liver neoplasia show that liver is a significant source of serum XylT2 activity. |
| T7 | 925-1088 | Sentence | denotes | The data presented suggest that serum XylT levels may be an informative biomarker in patients who suffer from diseases affecting platelet and/or liver homeostasis. |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 850-859 | Disease | denotes | neoplasia | http://purl.obolibrary.org/obo/MONDO_0005070 |
GlyCosmos6-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 350-358 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
| T2 | 487-495 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
| T3 | 550-555 | http://purl.obolibrary.org/obo/CLO_0007836 | denotes | mouse |
| T4 | 915-923 | http://purl.obolibrary.org/obo/CLO_0001658 | denotes | activity |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 550-555 | OrganismTaxon | denotes | mouse | NCBItxid:10088|NCBItxid:10090 |
| T3 | 560-565 | OrganismTaxon | denotes | human | NCBItxid:9606 |
| T4 | 645-650 | OrganismTaxon | denotes | human | NCBItxid:9606 |
| T5 | 825-829 | OrganismTaxon | denotes | mice | NCBItxid:10088|NCBItxid:10095 |
| T7 | 834-838 | OrganismTaxon | denotes | mice | NCBItxid:10088|NCBItxid:10095 |
DisGeNET
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T0 | 809-814 | gene:64132 | denotes | Xylt2 |
| T1 | 850-859 | disease:C0027651 | denotes | neoplasia |
| T2 | 809-814 | gene:64132 | denotes | Xylt2 |
| T3 | 850-859 | disease:C1882062 | denotes | neoplasia |
| T4 | 909-914 | gene:64132 | denotes | XylT2 |
| T5 | 850-859 | disease:C0027651 | denotes | neoplasia |
| T6 | 909-914 | gene:64132 | denotes | XylT2 |
| T7 | 850-859 | disease:C1882062 | denotes | neoplasia |
| R1 | T0 | T1 | associated_with | Xylt2,neoplasia |
| R2 | T2 | T3 | associated_with | Xylt2,neoplasia |
| R3 | T4 | T5 | associated_with | XylT2,neoplasia |
| R4 | T6 | T7 | associated_with | XylT2,neoplasia |
GlycoBiology-FMA
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T1 | 96-105 | FMAID:62851 | denotes | platelets |
| _T2 | 96-105 | FMAID:167145 | denotes | platelets |
| _T3 | 162-167 | FMAID:167330 | denotes | serum |
| _T4 | 271-276 | FMAID:167330 | denotes | serum |
| _T5 | 344-349 | FMAID:167330 | denotes | serum |
| _T6 | 590-595 | FMAID:167330 | denotes | serum |
| _T7 | 651-656 | FMAID:167330 | denotes | serum |
| _T8 | 701-707 | FMAID:162307 | denotes | plasma |
| _T9 | 740-749 | FMAID:167145 | denotes | platelets |
| _T10 | 740-749 | FMAID:62851 | denotes | platelets |
| _T11 | 757-762 | FMAID:256053 | denotes | blood |
| _T12 | 844-849 | FMAID:93672 | denotes | liver |
| _T13 | 844-849 | FMAID:7197 | denotes | liver |
| _T14 | 870-875 | FMAID:7197 | denotes | liver |
| _T15 | 870-875 | FMAID:93672 | denotes | liver |
| _T16 | 903-908 | FMAID:167330 | denotes | serum |
| _T17 | 957-962 | FMAID:167330 | denotes | serum |
| _T18 | 1054-1062 | FMAID:167145 | denotes | platelet |
| _T19 | 1054-1062 | FMAID:62851 | denotes | platelet |
| _T20 | 1070-1075 | FMAID:7197 | denotes | liver |
| _T21 | 1070-1075 | FMAID:93672 | denotes | liver |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-21 | http://www.uniprot.org/uniprot/Q9H1B5 | denotes | Xylosyltransferase II |
uniprot-mouse
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-21 | http://www.uniprot.org/uniprot/Q9EPL0 | denotes | Xylosyltransferase II |
| T2 | 809-814 | http://www.uniprot.org/uniprot/Q9EPL0 | denotes | Xylt2 |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 850-859 | http://purl.bioontology.org/ontology/NCBITAXON/217470 | denotes | neoplasia |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 350-375 | http://purl.obolibrary.org/obo/GO_0003824 | denotes | activity of these enzymes |
| T2 | 480-495 | http://purl.obolibrary.org/obo/GO_0003824 | denotes | enzyme activity |
| T3 | 757-771 | http://purl.obolibrary.org/obo/GO_0007596 | denotes | blood clotting |
| T4 | 763-771 | http://purl.obolibrary.org/obo/GO_0050817 | denotes | clotting |
| T5 | 1076-1087 | http://purl.obolibrary.org/obo/GO_0042592 | denotes | homeostasis |
| T6 | 1076-1087 | http://purl.obolibrary.org/obo/GO_0033484 | denotes | homeostasis |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 162-167 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| T2 | 271-276 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| T3 | 344-349 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| T4 | 590-595 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| T5 | 651-656 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| T6 | 903-908 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| T7 | 957-962 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| T8 | 757-762 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| T9 | 757-771 | http://purl.obolibrary.org/obo/UBERON_0010210 | denotes | blood clotting |
| T10 | 844-849 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
| T11 | 870-875 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
| T12 | 1070-1075 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
GlycoBiology-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 757-762 | http://purl.obolibrary.org/obo/MAT_0000315 | denotes | blood |
| T2 | 757-762 | http://purl.obolibrary.org/obo/MAT_0000083 | denotes | blood |
| T3 | 844-849 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
| T4 | 870-875 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
| T5 | 1070-1075 | http://purl.obolibrary.org/obo/MAT_0000097 | denotes | liver |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 844-849 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
| PD-UBERON-AE-B_T2 | 870-875 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
| PD-UBERON-AE-B_T3 | 1070-1075 | http://purl.obolibrary.org/obo/UBERON_0002107 | denotes | liver |
| PD-UBERON-AE-B_T4 | 757-762 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
| PD-UBERON-AE-B_T5 | 162-167 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| PD-UBERON-AE-B_T6 | 271-276 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| PD-UBERON-AE-B_T7 | 344-349 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| PD-UBERON-AE-B_T8 | 590-595 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| PD-UBERON-AE-B_T9 | 651-656 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| PD-UBERON-AE-B_T10 | 903-908 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| PD-UBERON-AE-B_T11 | 957-962 | http://purl.obolibrary.org/obo/UBERON_0001977 | denotes | serum |
| PD-UBERON-AE-B_T12 | 757-771 | http://purl.obolibrary.org/obo/UBERON_0010210 | denotes | blood clotting |