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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T1 0-177 Sentence denotes Reversible inferior colliculus lesion in metronidazole-induced encephalopathy: magnetic resonance findings on diffusion-weighted and fluid attenuated inversion recovery imaging.
T2 178-188 Sentence denotes OBJECTIVE:
T3 189-393 Sentence denotes This is to present reversible inferior colliculus lesions in metronidazole-induced encephalopathy, to focus on the diffusion-weighted imaging (DWI) and fluid attenuated inversion recovery (FLAIR) imaging.
T4 394-416 Sentence denotes MATERIALS AND METHODS:
T10 1249-1257 Sentence denotes RESULTS:
T5 417-573 Sentence denotes From November 2005 to September 2007, 8 patients (5 men and 3 women) were diagnosed as having metronidazole-induced encephalopathy (age range; 43-78 years).
T6 574-706 Sentence denotes They had been taking metronidazole (total dosage, 45-120 g; duration, 30 days to 2 months) to treat the infection in various organs.
T7 707-905 Sentence denotes Initial brain magnetic resonance imaging (MRI) were obtained after the hospitalization, including DWI (8/8), apparent diffusion coefficient (ADC) map (4/8), FLAIR (7/8), and T2-weighted image (8/8).
T8 906-1028 Sentence denotes Follow-up MRIs were performed on 5 patients from third to 14th days after discontinuation of metronidazole administration.
T9 1029-1248 Sentence denotes Findings of initial and follow-up MRIs were retrospectively evaluated by 2 neuroradiologists by consensus, to analyze the presence of abnormal signal intensities, their locations, and signal changes on follow-up images.
T11 1258-1500 Sentence denotes Initial MRIs showed abnormal high signal intensities on DWI and FLAIR (or T2-weighted image) at the dentate nucleus (8/8), inferior colliculus (6/8), corpus callosum (2/8), pons (2/8), medulla (1/8), and bilateral cerebral white matter (1/8).
T12 1501-1705 Sentence denotes High-signal intensity lesions on DWI tended to show low signal intensity on ADC map (3/4), but in one patient, high signal intensity was shown at bilateral dentate nuclei on not only DWI but also ADC map.
T13 1706-1895 Sentence denotes All the lesions in dentate, inferior colliculus, pons, and medullas had been resolved completely on follow-up MRIs in 5 patients, but in 1 patient of them, corpus callosal lesion persisted.
T14 1896-1908 Sentence denotes CONCLUSIONS:
T15 1909-2072 Sentence denotes Reversible inferior colliculus lesions could be considered as the characteristic for metronidazole-induced encephalopathy, next to the dentate nucleus involvement.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
5946 11-37 DiseaseOrPhenotypicFeature denotes inferior colliculus lesion MESH:D001927
5947 41-54 ChemicalEntity denotes metronidazole MESH:D008795
5948 63-77 DiseaseOrPhenotypicFeature denotes encephalopathy MESH:D001927
5949 219-246 DiseaseOrPhenotypicFeature denotes inferior colliculus lesions MESH:D001927
5950 250-263 ChemicalEntity denotes metronidazole MESH:D008795
5951 272-286 DiseaseOrPhenotypicFeature denotes encephalopathy MESH:D001927
5952 457-465 OrganismTaxon denotes patients NCBITaxon:9606
5953 469-472 OrganismTaxon denotes men NCBITaxon:9606
5954 479-484 OrganismTaxon denotes women NCBITaxon:9606
5955 511-524 ChemicalEntity denotes metronidazole MESH:D008795
5956 533-547 DiseaseOrPhenotypicFeature denotes encephalopathy MESH:D001927
5957 595-608 ChemicalEntity denotes metronidazole MESH:D008795
5958 678-687 DiseaseOrPhenotypicFeature denotes infection MESH:D007239
5959 941-949 OrganismTaxon denotes patients NCBITaxon:9606
5960 999-1012 ChemicalEntity denotes metronidazole MESH:D008795
5961 1603-1610 OrganismTaxon denotes patient NCBITaxon:9606
5962 1826-1834 OrganismTaxon denotes patients NCBITaxon:9606
5963 1845-1852 OrganismTaxon denotes patient NCBITaxon:9606
5964 1869-1884 DiseaseOrPhenotypicFeature denotes callosal lesion MESH:D001927
5965 1920-1947 DiseaseOrPhenotypicFeature denotes inferior colliculus lesions MESH:D001927
5966 1994-2007 ChemicalEntity denotes metronidazole MESH:D008795
5967 2016-2030 DiseaseOrPhenotypicFeature denotes encephalopathy MESH:D001927

LitCoin_Mondo

Id Subject Object Predicate Lexical cue mondo_id
T1 1472-1480 DiseaseOrPhenotypicFeature denotes cerebral 0002645
T2 1792-1802 DiseaseOrPhenotypicFeature denotes completely 0700063

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T1 31-37 GeneOrGeneProduct denotes lesion
T2 55-62 GeneOrGeneProduct denotes induced
T3 98-106 GeneOrGeneProduct denotes findings
T4 139-149 GeneOrGeneProduct denotes attenuated
T5 239-246 GeneOrGeneProduct denotes lesions
T6 264-271 GeneOrGeneProduct denotes induced
T7 347-357 GeneOrGeneProduct denotes attenuated
T8 404-415 GeneOrGeneProduct denotes AND METHODS
T9 473-478 GeneOrGeneProduct denotes and 3
T10 525-532 GeneOrGeneProduct denotes induced
T11 553-558 GeneOrGeneProduct denotes range
T12 566-571 GeneOrGeneProduct denotes years
T13 610-615 GeneOrGeneProduct denotes total
T14 707-714 GeneOrGeneProduct denotes Initial
T15 715-720 GeneOrGeneProduct denotes brain
T16 848-851 GeneOrGeneProduct denotes ADC
T17 881-883 GeneOrGeneProduct denotes T2
T18 1029-1037 GeneOrGeneProduct denotes Findings
T19 1041-1048 GeneOrGeneProduct denotes initial
T20 1258-1265 GeneOrGeneProduct denotes Initial
T21 1287-1291 GeneOrGeneProduct denotes high
T22 1332-1334 GeneOrGeneProduct denotes T2
T23 1366-1373 GeneOrGeneProduct denotes nucleus
T24 1431-1435 GeneOrGeneProduct denotes pons
T25 1481-1486 GeneOrGeneProduct denotes white
T26 1501-1505 GeneOrGeneProduct denotes High
T27 1523-1530 GeneOrGeneProduct denotes lesions
T28 1538-1544 GeneOrGeneProduct denotes tended
T29 1577-1580 GeneOrGeneProduct denotes ADC
T30 1581-1590 GeneOrGeneProduct denotes map (3/4)
T31 1612-1616 GeneOrGeneProduct denotes high
T32 1697-1700 GeneOrGeneProduct denotes ADC
T33 1706-1709 GeneOrGeneProduct denotes All
T34 1714-1721 GeneOrGeneProduct denotes lesions
T35 1755-1759 GeneOrGeneProduct denotes pons
T36 1821-1825 GeneOrGeneProduct denotes in 5
T37 1840-1844 GeneOrGeneProduct denotes in 1
T38 1856-1860 GeneOrGeneProduct denotes them
T39 1878-1884 GeneOrGeneProduct denotes lesion
T40 1885-1894 GeneOrGeneProduct denotes persisted
T41 1940-1947 GeneOrGeneProduct denotes lesions
T42 2008-2015 GeneOrGeneProduct denotes induced
T43 2052-2059 GeneOrGeneProduct denotes nucleus

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T1 139-149 GeneOrGeneProduct denotes attenuated
T2 239-246 GeneOrGeneProduct denotes lesions
T3 347-357 GeneOrGeneProduct denotes attenuated
T4 715-720 GeneOrGeneProduct denotes brain
T5 1287-1291 GeneOrGeneProduct denotes high
T6 1366-1373 GeneOrGeneProduct denotes nucleus
T7 1481-1486 GeneOrGeneProduct denotes white
T8 1523-1530 GeneOrGeneProduct denotes lesions
T9 1612-1616 GeneOrGeneProduct denotes high
T10 1714-1721 GeneOrGeneProduct denotes lesions
T11 1940-1947 GeneOrGeneProduct denotes lesions
T12 2052-2059 GeneOrGeneProduct denotes nucleus

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T1 63-77 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T2 272-286 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T3 533-547 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T4 678-687 DiseaseOrPhenotypicFeature denotes infection D007239
T5 2016-2030 DiseaseOrPhenotypicFeature denotes encephalopathy D001927

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T1 1481-1486 GeneOrGeneProduct denotes white

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T1 150-159 DiseaseOrPhenotypicFeature denotes inversion 0043678
T2 358-367 DiseaseOrPhenotypicFeature denotes inversion 0043678
T3 469-472 DiseaseOrPhenotypicFeature denotes men 0017169
T4 678-687 DiseaseOrPhenotypicFeature denotes infection 0005550
T5 848-851 DiseaseOrPhenotypicFeature denotes ADC 0020689
T6 1577-1580 DiseaseOrPhenotypicFeature denotes ADC 0020689
T7 1697-1700 DiseaseOrPhenotypicFeature denotes ADC 0020689

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T1 11-37 DiseaseOrPhenotypicFeature denotes inferior colliculus lesion DISEASE
T2 63-77 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T3 219-246 DiseaseOrPhenotypicFeature denotes inferior colliculus lesions DISEASE
T4 272-286 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T5 533-547 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T6 678-687 DiseaseOrPhenotypicFeature denotes infection D007239
T7 1869-1884 DiseaseOrPhenotypicFeature denotes callosal lesion DISEASE
T8 1920-1947 DiseaseOrPhenotypicFeature denotes inferior colliculus lesions DISEASE
T9 2016-2030 DiseaseOrPhenotypicFeature denotes encephalopathy D001927

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T1 11-37 DiseaseOrPhenotypicFeature denotes inferior colliculus lesion DISEASE
T2 63-77 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T3 219-246 DiseaseOrPhenotypicFeature denotes inferior colliculus lesions DISEASE
T4 272-286 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T5 533-547 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T6 1869-1884 DiseaseOrPhenotypicFeature denotes callosal lesion DISEASE
T7 1920-1947 DiseaseOrPhenotypicFeature denotes inferior colliculus lesions DISEASE
T8 2016-2030 DiseaseOrPhenotypicFeature denotes encephalopathy D001927

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 41-54 ChemicalEntity denotes metronidazole D008795|http://purl.obolibrary.org/obo/CHEBI_6909
T3 250-263 ChemicalEntity denotes metronidazole D008795|http://purl.obolibrary.org/obo/CHEBI_6909
T5 511-524 ChemicalEntity denotes metronidazole D008795|http://purl.obolibrary.org/obo/CHEBI_6909
T7 595-608 ChemicalEntity denotes metronidazole D008795|http://purl.obolibrary.org/obo/CHEBI_6909
T9 848-851 ChemicalEntity denotes ADC http://purl.obolibrary.org/obo/CHEBI_35181|http://purl.obolibrary.org/obo/CHEBI_18198
T11 999-1012 ChemicalEntity denotes metronidazole D008795|http://purl.obolibrary.org/obo/CHEBI_6909
T13 1577-1580 ChemicalEntity denotes ADC http://purl.obolibrary.org/obo/CHEBI_35181|http://purl.obolibrary.org/obo/CHEBI_18198
T15 1697-1700 ChemicalEntity denotes ADC http://purl.obolibrary.org/obo/CHEBI_35181|http://purl.obolibrary.org/obo/CHEBI_18198
T17 1994-2007 ChemicalEntity denotes metronidazole D008795|http://purl.obolibrary.org/obo/CHEBI_6909

LitCoin-NCBITaxon-2

Id Subject Object Predicate Lexical cue
T1 457-465 OrganismTaxon denotes patients
T2 469-472 OrganismTaxon denotes men
T3 479-484 OrganismTaxon denotes women
T4 941-949 OrganismTaxon denotes patients
T5 1603-1610 OrganismTaxon denotes patient
T6 1826-1834 OrganismTaxon denotes patients
T7 1845-1852 OrganismTaxon denotes patient

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T17 1994-2007 ChemicalEntity denotes metronidazole http://purl.obolibrary.org/obo/CHEBI_6909|D008795
T15 1697-1700 ChemicalEntity denotes ADC http://purl.obolibrary.org/obo/CHEBI_18198|http://purl.obolibrary.org/obo/CHEBI_35181
T13 1577-1580 ChemicalEntity denotes ADC http://purl.obolibrary.org/obo/CHEBI_18198|http://purl.obolibrary.org/obo/CHEBI_35181
T11 999-1012 ChemicalEntity denotes metronidazole http://purl.obolibrary.org/obo/CHEBI_6909|D008795
T9 848-851 ChemicalEntity denotes ADC http://purl.obolibrary.org/obo/CHEBI_18198|http://purl.obolibrary.org/obo/CHEBI_35181
T7 595-608 ChemicalEntity denotes metronidazole http://purl.obolibrary.org/obo/CHEBI_6909|D008795
T5 511-524 ChemicalEntity denotes metronidazole http://purl.obolibrary.org/obo/CHEBI_6909|D008795
T3 250-263 ChemicalEntity denotes metronidazole http://purl.obolibrary.org/obo/CHEBI_6909|D008795
T1 41-54 ChemicalEntity denotes metronidazole http://purl.obolibrary.org/obo/CHEBI_6909|D008795
T1171 1481-1486 GeneOrGeneProduct denotes white
T8 2016-2030 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T87488 1920-1947 DiseaseOrPhenotypicFeature denotes inferior colliculus lesions DISEASE
T6 1869-1884 DiseaseOrPhenotypicFeature denotes callosal lesion DISEASE
T3250 533-547 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T4 272-286 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T48117 219-246 DiseaseOrPhenotypicFeature denotes inferior colliculus lesions DISEASE
T2 63-77 DiseaseOrPhenotypicFeature denotes encephalopathy D001927
T62847 11-37 DiseaseOrPhenotypicFeature denotes inferior colliculus lesion DISEASE
T34289 1845-1852 OrganismTaxon denotes patient
T24628 1826-1834 OrganismTaxon denotes patients
T79130 1603-1610 OrganismTaxon denotes patient
T36043 941-949 OrganismTaxon denotes patients
T63029 479-484 OrganismTaxon denotes women
T18297 469-472 OrganismTaxon denotes men
T4605 457-465 OrganismTaxon denotes patients