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PubMed:1933953 JSONTXT

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GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 120-129 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE
T3 687-696 Glycan_Motif denotes T-antigen https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO
T4 867-877 Glycan_Motif denotes asialo-GM1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G21856LC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00407UJ
T6 874-877 Glycan_Motif denotes GM1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI
T8 1317-1327 Glycan_Motif denotes asialo-GM1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G21856LC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00407UJ
T10 1324-1327 Glycan_Motif denotes GM1 https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI
T12 1512-1521 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE
T14 1632-1641 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE
T16 1665-1674 Glycan_Motif denotes galactose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE
T18 1678-1685 Glycan_Motif denotes glucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G15021LG
T19 1713-1720 Glycan_Motif denotes glucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G15021LG

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 120-129 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T2 120-129 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T3 687-696 https://glytoucan.org/Structures/Glycans/G00031MO denotes T-antigen
T4 867-877 https://glytoucan.org/Structures/Glycans/G00407UJ denotes asialo-GM1
T5 867-877 https://glytoucan.org/Structures/Glycans/G21856LC denotes asialo-GM1
T6 874-877 https://glytoucan.org/Structures/Glycans/G46613JI denotes GM1
T7 874-877 https://glytoucan.org/Structures/Glycans/G48558GR denotes GM1
T8 1317-1327 https://glytoucan.org/Structures/Glycans/G00407UJ denotes asialo-GM1
T9 1317-1327 https://glytoucan.org/Structures/Glycans/G21856LC denotes asialo-GM1
T10 1324-1327 https://glytoucan.org/Structures/Glycans/G46613JI denotes GM1
T11 1324-1327 https://glytoucan.org/Structures/Glycans/G48558GR denotes GM1
T12 1512-1521 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T13 1512-1521 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T14 1632-1641 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T15 1632-1641 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T16 1665-1674 https://glytoucan.org/Structures/Glycans/G65889KE denotes galactose
T17 1665-1674 https://glytoucan.org/Structures/Glycans/G68158BT denotes galactose
T18 1678-1685 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose
T19 1713-1720 https://glytoucan.org/Structures/Glycans/G15021LG denotes glucose

Glycosmos6-GlycoEpitope

Id Subject Object Predicate Lexical cue
T1 687-696 http://www.glycoepitope.jp/epitopes/EP0020 denotes T-antigen
T2 874-877 http://www.glycoepitope.jp/epitopes/EP0050 denotes GM1
T3 1324-1327 http://www.glycoepitope.jp/epitopes/EP0050 denotes GM1

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-95 Sentence denotes Further characterization of the saccharide specificity of peanut (Arachis hypogaea) agglutinin.
TextSentencer_T2 96-241 Sentence denotes 2-Dansylamino-2-deoxy-D-galactose (GalNDns) has been shown to bind to peanut (Arachis hypogaea) agglutinin (PNA) in a saccharide-specific manner.
TextSentencer_T3 242-326 Sentence denotes This binding was accompanied by a five-fold increase in the fluorescence of GalNDns.
TextSentencer_T4 327-499 Sentence denotes The interaction was characterized by an association constant of 0.15 mM at 15 degrees and delta H and delta S values of -57.04 kJ.mol-1 and -118.1J.mol-1.K-1, respectively.
TextSentencer_T5 500-1344 Sentence denotes Binding of a variety of other mono-, di- and oligo-saccharides to PNA, studied by monitoring their ability to dissociate the PNA GalNDns complex, revealed that PNA interacts with several T-antigen-related structures, such as beta-D-Galp-(1----3)-D-GalNAc, beta-D-Galp-(1----3)-alpha-D-GalpNAcOMe, and beta-D-Galp-(1----3)-alpha-D-GalpNAc-(1----3)-Ser, as well as the asialo-GM1 tetrasaccharide, with comparable affinity, thus showing that this lectin does not discriminate between saccharides in which the penultimate sugar of the beta-D-Galp-(1----3)-D-GalNAc unit is the alpha or beta anomer, in contrast to jacalin (Artocarpus integrifolia agglutinin), another anti T-lectin which preferentially binds to beta-D-Galp-(1----3)-alpha-D-GalNAc and does not recognize beta-D-Galp-(1----3)-beta-D-GalNAc or the related asialo-GM1 oligosaccharide.
TextSentencer_T6 1345-1721 Sentence denotes These studies also indicated that, in the extended combining region of PNA which accommodates a disaccharide, the primary subsite (subsite A) is highly specific for D-galactose, whereas the secondary subsite (subsite B) is less specific and can accommodate various structures, such as D-galactose, 2-acetamido-2-deoxy-D-galactose, D-glucose, and 2-acetamido-2-deoxy-D-glucose.
T1 0-95 Sentence denotes Further characterization of the saccharide specificity of peanut (Arachis hypogaea) agglutinin.
T2 96-241 Sentence denotes 2-Dansylamino-2-deoxy-D-galactose (GalNDns) has been shown to bind to peanut (Arachis hypogaea) agglutinin (PNA) in a saccharide-specific manner.
T3 242-326 Sentence denotes This binding was accompanied by a five-fold increase in the fluorescence of GalNDns.
T4 327-499 Sentence denotes The interaction was characterized by an association constant of 0.15 mM at 15 degrees and delta H and delta S values of -57.04 kJ.mol-1 and -118.1J.mol-1.K-1, respectively.
T5 500-1344 Sentence denotes Binding of a variety of other mono-, di- and oligo-saccharides to PNA, studied by monitoring their ability to dissociate the PNA GalNDns complex, revealed that PNA interacts with several T-antigen-related structures, such as beta-D-Galp-(1----3)-D-GalNAc, beta-D-Galp-(1----3)-alpha-D-GalpNAcOMe, and beta-D-Galp-(1----3)-alpha-D-GalpNAc-(1----3)-Ser, as well as the asialo-GM1 tetrasaccharide, with comparable affinity, thus showing that this lectin does not discriminate between saccharides in which the penultimate sugar of the beta-D-Galp-(1----3)-D-GalNAc unit is the alpha or beta anomer, in contrast to jacalin (Artocarpus integrifolia agglutinin), another anti T-lectin which preferentially binds to beta-D-Galp-(1----3)-alpha-D-GalNAc and does not recognize beta-D-Galp-(1----3)-beta-D-GalNAc or the related asialo-GM1 oligosaccharide.
T6 1345-1721 Sentence denotes These studies also indicated that, in the extended combining region of PNA which accommodates a disaccharide, the primary subsite (subsite A) is highly specific for D-galactose, whereas the secondary subsite (subsite B) is less specific and can accommodate various structures, such as D-galactose, 2-acetamido-2-deoxy-D-galactose, D-glucose, and 2-acetamido-2-deoxy-D-glucose.

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 687-696 Glycan denotes T-antigen https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO
T2 748-754 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T3 867-877 Glycan denotes asialo-GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G21856LC
T4 1054-1060 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T5 1237-1243 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T6 1295-1301 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T7 1317-1327 Glycan denotes asialo-GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G21856LC

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 748-754 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T2 874-877 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR
T3 1054-1060 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T4 1237-1243 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T5 1295-1301 Glycan denotes GalNAc https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL
T6 1324-1327 Glycan denotes GM1 https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR

GlyCosmos-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 687-696 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes T-antigen http://www.glycoepitope.jp/epitopes/EP0020
T2 874-877 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T3 1324-1327 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050

GlyCosmos15-CL

Id Subject Object Predicate Lexical cue cl_id
T1 417-422 Cell denotes delta http://purl.obolibrary.org/obo/CL:0004124
T2 429-434 Cell denotes delta http://purl.obolibrary.org/obo/CL:0004124

GlyCosmos15-Taxon

Id Subject Object Predicate Lexical cue db_id
T1 66-82 Organism denotes Arachis hypogaea 3818
T2 174-190 Organism denotes Arachis hypogaea 3818
T3 1119-1142 Organism denotes Artocarpus integrifolia 3490

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-95 Sentence denotes Further characterization of the saccharide specificity of peanut (Arachis hypogaea) agglutinin.
T2 96-241 Sentence denotes 2-Dansylamino-2-deoxy-D-galactose (GalNDns) has been shown to bind to peanut (Arachis hypogaea) agglutinin (PNA) in a saccharide-specific manner.
T3 242-326 Sentence denotes This binding was accompanied by a five-fold increase in the fluorescence of GalNDns.
T4 327-499 Sentence denotes The interaction was characterized by an association constant of 0.15 mM at 15 degrees and delta H and delta S values of -57.04 kJ.mol-1 and -118.1J.mol-1.K-1, respectively.
T5 500-1344 Sentence denotes Binding of a variety of other mono-, di- and oligo-saccharides to PNA, studied by monitoring their ability to dissociate the PNA GalNDns complex, revealed that PNA interacts with several T-antigen-related structures, such as beta-D-Galp-(1----3)-D-GalNAc, beta-D-Galp-(1----3)-alpha-D-GalpNAcOMe, and beta-D-Galp-(1----3)-alpha-D-GalpNAc-(1----3)-Ser, as well as the asialo-GM1 tetrasaccharide, with comparable affinity, thus showing that this lectin does not discriminate between saccharides in which the penultimate sugar of the beta-D-Galp-(1----3)-D-GalNAc unit is the alpha or beta anomer, in contrast to jacalin (Artocarpus integrifolia agglutinin), another anti T-lectin which preferentially binds to beta-D-Galp-(1----3)-alpha-D-GalNAc and does not recognize beta-D-Galp-(1----3)-beta-D-GalNAc or the related asialo-GM1 oligosaccharide.
T6 1345-1721 Sentence denotes These studies also indicated that, in the extended combining region of PNA which accommodates a disaccharide, the primary subsite (subsite A) is highly specific for D-galactose, whereas the secondary subsite (subsite B) is less specific and can accommodate various structures, such as D-galactose, 2-acetamido-2-deoxy-D-galactose, D-glucose, and 2-acetamido-2-deoxy-D-glucose.

GlyCosmos15-GlycoEpitope

Id Subject Object Predicate Lexical cue glycoepitope_id
T1 687-696 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes T-antigen http://www.glycoepitope.jp/epitopes/EP0020
T2 874-877 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050
T3 1324-1327 http://purl.jp/bio/12/glyco/glycan#Glycan_epitope denotes GM1 http://www.glycoepitope.jp/epitopes/EP0050

GlyCosmos15-Lectin-Jamboree

Id Subject Object Predicate Lexical cue glycosmos_id
T1 204-207 Lectin denotes PNA GL_003655
T2 566-569 Lectin denotes PNA GL_003655
T3 625-628 Lectin denotes PNA GL_003655
T4 660-663 Lectin denotes PNA GL_003655
T5 1110-1117 Lectin denotes jacalin GL_002258
T6 1416-1419 Lectin denotes PNA GL_003655

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 66-82 OrganismTaxon denotes Arachis hypogaea 3818
T2 174-190 OrganismTaxon denotes Arachis hypogaea 3818
T3 1119-1142 OrganismTaxon denotes Artocarpus integrifolia 3490

GlyCosmos15-Lectin

Id Subject Object Predicate Lexical cue
T1 1110-1117 GL_000029 denotes jacalin
T2 1119-1153 GL_000029 denotes Artocarpus integrifolia agglutinin

Lectin_test

Id Subject Object Predicate Lexical cue
T1 1110-1117 GL_000029 denotes jacalin
T2 1119-1153 GL_000029 denotes Artocarpus integrifolia agglutinin

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 417-422 Cell denotes delta http://purl.obolibrary.org/obo/CL:0004124
T2 429-434 Cell denotes delta http://purl.obolibrary.org/obo/CL:0004124