PubMed:1933953
Annnotations
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 120-129 | Glycan_Motif | denotes | galactose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE |
| T3 | 687-696 | Glycan_Motif | denotes | T-antigen | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00031MO |
| T4 | 867-877 | Glycan_Motif | denotes | asialo-GM1 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G21856LC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00407UJ |
| T6 | 874-877 | Glycan_Motif | denotes | GM1 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI |
| T8 | 1317-1327 | Glycan_Motif | denotes | asialo-GM1 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G21856LC|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G00407UJ |
| T10 | 1324-1327 | Glycan_Motif | denotes | GM1 | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G48558GR|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G46613JI |
| T12 | 1512-1521 | Glycan_Motif | denotes | galactose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE |
| T14 | 1632-1641 | Glycan_Motif | denotes | galactose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE |
| T16 | 1665-1674 | Glycan_Motif | denotes | galactose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE |
| T18 | 1678-1685 | Glycan_Motif | denotes | glucose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G15021LG |
| T19 | 1713-1720 | Glycan_Motif | denotes | glucose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G15021LG |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 120-129 | https://glytoucan.org/Structures/Glycans/G65889KE | denotes | galactose |
| T2 | 120-129 | https://glytoucan.org/Structures/Glycans/G68158BT | denotes | galactose |
| T3 | 687-696 | https://glytoucan.org/Structures/Glycans/G00031MO | denotes | T-antigen |
| T4 | 867-877 | https://glytoucan.org/Structures/Glycans/G00407UJ | denotes | asialo-GM1 |
| T5 | 867-877 | https://glytoucan.org/Structures/Glycans/G21856LC | denotes | asialo-GM1 |
| T6 | 874-877 | https://glytoucan.org/Structures/Glycans/G46613JI | denotes | GM1 |
| T7 | 874-877 | https://glytoucan.org/Structures/Glycans/G48558GR | denotes | GM1 |
| T8 | 1317-1327 | https://glytoucan.org/Structures/Glycans/G00407UJ | denotes | asialo-GM1 |
| T9 | 1317-1327 | https://glytoucan.org/Structures/Glycans/G21856LC | denotes | asialo-GM1 |
| T10 | 1324-1327 | https://glytoucan.org/Structures/Glycans/G46613JI | denotes | GM1 |
| T11 | 1324-1327 | https://glytoucan.org/Structures/Glycans/G48558GR | denotes | GM1 |
| T12 | 1512-1521 | https://glytoucan.org/Structures/Glycans/G65889KE | denotes | galactose |
| T13 | 1512-1521 | https://glytoucan.org/Structures/Glycans/G68158BT | denotes | galactose |
| T14 | 1632-1641 | https://glytoucan.org/Structures/Glycans/G65889KE | denotes | galactose |
| T15 | 1632-1641 | https://glytoucan.org/Structures/Glycans/G68158BT | denotes | galactose |
| T16 | 1665-1674 | https://glytoucan.org/Structures/Glycans/G65889KE | denotes | galactose |
| T17 | 1665-1674 | https://glytoucan.org/Structures/Glycans/G68158BT | denotes | galactose |
| T18 | 1678-1685 | https://glytoucan.org/Structures/Glycans/G15021LG | denotes | glucose |
| T19 | 1713-1720 | https://glytoucan.org/Structures/Glycans/G15021LG | denotes | glucose |
Glycosmos6-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 687-696 | http://www.glycoepitope.jp/epitopes/EP0020 | denotes | T-antigen |
| T2 | 874-877 | http://www.glycoepitope.jp/epitopes/EP0050 | denotes | GM1 |
| T3 | 1324-1327 | http://www.glycoepitope.jp/epitopes/EP0050 | denotes | GM1 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-95 | Sentence | denotes | Further characterization of the saccharide specificity of peanut (Arachis hypogaea) agglutinin. |
| TextSentencer_T2 | 96-241 | Sentence | denotes | 2-Dansylamino-2-deoxy-D-galactose (GalNDns) has been shown to bind to peanut (Arachis hypogaea) agglutinin (PNA) in a saccharide-specific manner. |
| TextSentencer_T3 | 242-326 | Sentence | denotes | This binding was accompanied by a five-fold increase in the fluorescence of GalNDns. |
| TextSentencer_T4 | 327-499 | Sentence | denotes | The interaction was characterized by an association constant of 0.15 mM at 15 degrees and delta H and delta S values of -57.04 kJ.mol-1 and -118.1J.mol-1.K-1, respectively. |
| TextSentencer_T5 | 500-1344 | Sentence | denotes | Binding of a variety of other mono-, di- and oligo-saccharides to PNA, studied by monitoring their ability to dissociate the PNA GalNDns complex, revealed that PNA interacts with several T-antigen-related structures, such as beta-D-Galp-(1----3)-D-GalNAc, beta-D-Galp-(1----3)-alpha-D-GalpNAcOMe, and beta-D-Galp-(1----3)-alpha-D-GalpNAc-(1----3)-Ser, as well as the asialo-GM1 tetrasaccharide, with comparable affinity, thus showing that this lectin does not discriminate between saccharides in which the penultimate sugar of the beta-D-Galp-(1----3)-D-GalNAc unit is the alpha or beta anomer, in contrast to jacalin (Artocarpus integrifolia agglutinin), another anti T-lectin which preferentially binds to beta-D-Galp-(1----3)-alpha-D-GalNAc and does not recognize beta-D-Galp-(1----3)-beta-D-GalNAc or the related asialo-GM1 oligosaccharide. |
| TextSentencer_T6 | 1345-1721 | Sentence | denotes | These studies also indicated that, in the extended combining region of PNA which accommodates a disaccharide, the primary subsite (subsite A) is highly specific for D-galactose, whereas the secondary subsite (subsite B) is less specific and can accommodate various structures, such as D-galactose, 2-acetamido-2-deoxy-D-galactose, D-glucose, and 2-acetamido-2-deoxy-D-glucose. |
| T1 | 0-95 | Sentence | denotes | Further characterization of the saccharide specificity of peanut (Arachis hypogaea) agglutinin. |
| T2 | 96-241 | Sentence | denotes | 2-Dansylamino-2-deoxy-D-galactose (GalNDns) has been shown to bind to peanut (Arachis hypogaea) agglutinin (PNA) in a saccharide-specific manner. |
| T3 | 242-326 | Sentence | denotes | This binding was accompanied by a five-fold increase in the fluorescence of GalNDns. |
| T4 | 327-499 | Sentence | denotes | The interaction was characterized by an association constant of 0.15 mM at 15 degrees and delta H and delta S values of -57.04 kJ.mol-1 and -118.1J.mol-1.K-1, respectively. |
| T5 | 500-1344 | Sentence | denotes | Binding of a variety of other mono-, di- and oligo-saccharides to PNA, studied by monitoring their ability to dissociate the PNA GalNDns complex, revealed that PNA interacts with several T-antigen-related structures, such as beta-D-Galp-(1----3)-D-GalNAc, beta-D-Galp-(1----3)-alpha-D-GalpNAcOMe, and beta-D-Galp-(1----3)-alpha-D-GalpNAc-(1----3)-Ser, as well as the asialo-GM1 tetrasaccharide, with comparable affinity, thus showing that this lectin does not discriminate between saccharides in which the penultimate sugar of the beta-D-Galp-(1----3)-D-GalNAc unit is the alpha or beta anomer, in contrast to jacalin (Artocarpus integrifolia agglutinin), another anti T-lectin which preferentially binds to beta-D-Galp-(1----3)-alpha-D-GalNAc and does not recognize beta-D-Galp-(1----3)-beta-D-GalNAc or the related asialo-GM1 oligosaccharide. |
| T6 | 1345-1721 | Sentence | denotes | These studies also indicated that, in the extended combining region of PNA which accommodates a disaccharide, the primary subsite (subsite A) is highly specific for D-galactose, whereas the secondary subsite (subsite B) is less specific and can accommodate various structures, such as D-galactose, 2-acetamido-2-deoxy-D-galactose, D-glucose, and 2-acetamido-2-deoxy-D-glucose. |
GlyCosmos15-Glycan
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 687-696 | Glycan | denotes | T-antigen | https://api.glycosmos.org/wurcs2image/latest/png/binary/G00031MO |
| T2 | 748-754 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T3 | 867-877 | Glycan | denotes | asialo-GM1 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G21856LC |
| T4 | 1054-1060 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T5 | 1237-1243 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T6 | 1295-1301 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T7 | 1317-1327 | Glycan | denotes | asialo-GM1 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G21856LC |
Glycan-GlyCosmos
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 748-754 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T2 | 874-877 | Glycan | denotes | GM1 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR |
| T3 | 1054-1060 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T4 | 1237-1243 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T5 | 1295-1301 | Glycan | denotes | GalNAc | https://api.glycosmos.org/wurcs2image/latest/png/binary/G39738WL |
| T6 | 1324-1327 | Glycan | denotes | GM1 | https://api.glycosmos.org/wurcs2image/latest/png/binary/G48558GR |
GlyCosmos-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 687-696 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | T-antigen | http://www.glycoepitope.jp/epitopes/EP0020 |
| T2 | 874-877 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM1 | http://www.glycoepitope.jp/epitopes/EP0050 |
| T3 | 1324-1327 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM1 | http://www.glycoepitope.jp/epitopes/EP0050 |
GlyCosmos15-CL
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 417-422 | Cell | denotes | delta | http://purl.obolibrary.org/obo/CL:0004124 |
| T2 | 429-434 | Cell | denotes | delta | http://purl.obolibrary.org/obo/CL:0004124 |
GlyCosmos15-Taxon
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 66-82 | Organism | denotes | Arachis hypogaea | 3818 |
| T2 | 174-190 | Organism | denotes | Arachis hypogaea | 3818 |
| T3 | 1119-1142 | Organism | denotes | Artocarpus integrifolia | 3490 |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-95 | Sentence | denotes | Further characterization of the saccharide specificity of peanut (Arachis hypogaea) agglutinin. |
| T2 | 96-241 | Sentence | denotes | 2-Dansylamino-2-deoxy-D-galactose (GalNDns) has been shown to bind to peanut (Arachis hypogaea) agglutinin (PNA) in a saccharide-specific manner. |
| T3 | 242-326 | Sentence | denotes | This binding was accompanied by a five-fold increase in the fluorescence of GalNDns. |
| T4 | 327-499 | Sentence | denotes | The interaction was characterized by an association constant of 0.15 mM at 15 degrees and delta H and delta S values of -57.04 kJ.mol-1 and -118.1J.mol-1.K-1, respectively. |
| T5 | 500-1344 | Sentence | denotes | Binding of a variety of other mono-, di- and oligo-saccharides to PNA, studied by monitoring their ability to dissociate the PNA GalNDns complex, revealed that PNA interacts with several T-antigen-related structures, such as beta-D-Galp-(1----3)-D-GalNAc, beta-D-Galp-(1----3)-alpha-D-GalpNAcOMe, and beta-D-Galp-(1----3)-alpha-D-GalpNAc-(1----3)-Ser, as well as the asialo-GM1 tetrasaccharide, with comparable affinity, thus showing that this lectin does not discriminate between saccharides in which the penultimate sugar of the beta-D-Galp-(1----3)-D-GalNAc unit is the alpha or beta anomer, in contrast to jacalin (Artocarpus integrifolia agglutinin), another anti T-lectin which preferentially binds to beta-D-Galp-(1----3)-alpha-D-GalNAc and does not recognize beta-D-Galp-(1----3)-beta-D-GalNAc or the related asialo-GM1 oligosaccharide. |
| T6 | 1345-1721 | Sentence | denotes | These studies also indicated that, in the extended combining region of PNA which accommodates a disaccharide, the primary subsite (subsite A) is highly specific for D-galactose, whereas the secondary subsite (subsite B) is less specific and can accommodate various structures, such as D-galactose, 2-acetamido-2-deoxy-D-galactose, D-glucose, and 2-acetamido-2-deoxy-D-glucose. |
GlyCosmos15-GlycoEpitope
| Id | Subject | Object | Predicate | Lexical cue | glycoepitope_id |
|---|---|---|---|---|---|
| T1 | 687-696 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | T-antigen | http://www.glycoepitope.jp/epitopes/EP0020 |
| T2 | 874-877 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM1 | http://www.glycoepitope.jp/epitopes/EP0050 |
| T3 | 1324-1327 | http://purl.jp/bio/12/glyco/glycan#Glycan_epitope | denotes | GM1 | http://www.glycoepitope.jp/epitopes/EP0050 |
GlyCosmos15-Lectin-Jamboree
| Id | Subject | Object | Predicate | Lexical cue | glycosmos_id |
|---|---|---|---|---|---|
| T1 | 204-207 | Lectin | denotes | PNA | GL_003655 |
| T2 | 566-569 | Lectin | denotes | PNA | GL_003655 |
| T3 | 625-628 | Lectin | denotes | PNA | GL_003655 |
| T4 | 660-663 | Lectin | denotes | PNA | GL_003655 |
| T5 | 1110-1117 | Lectin | denotes | jacalin | GL_002258 |
| T6 | 1416-1419 | Lectin | denotes | PNA | GL_003655 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 66-82 | OrganismTaxon | denotes | Arachis hypogaea | 3818 |
| T2 | 174-190 | OrganismTaxon | denotes | Arachis hypogaea | 3818 |
| T3 | 1119-1142 | OrganismTaxon | denotes | Artocarpus integrifolia | 3490 |
GlyCosmos15-Lectin
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1110-1117 | GL_000029 | denotes | jacalin |
| T2 | 1119-1153 | GL_000029 | denotes | Artocarpus integrifolia agglutinin |
Lectin_test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 1110-1117 | GL_000029 | denotes | jacalin |
| T2 | 1119-1153 | GL_000029 | denotes | Artocarpus integrifolia agglutinin |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 417-422 | Cell | denotes | delta | http://purl.obolibrary.org/obo/CL:0004124 |
| T2 | 429-434 | Cell | denotes | delta | http://purl.obolibrary.org/obo/CL:0004124 |