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PubMed:19338054 JSONTXT

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PubTator4TogoVar

Id Subject Object Predicate Lexical cue proteinmutation
19338054_0 942-952 ProteinMutation denotes p.Val51Ala rs766080391
19338054_1 967-978 ProteinMutation denotes p.Cys289Arg rs369542041
19338054_2 1033-1043 ProteinMutation denotes p.Val38Met rs200050206
19338054_3 1077-1088 ProteinMutation denotes p.Met128Thr rs374235260
19338054_4 1104-1115 ProteinMutation denotes p.Asn281Ser rs141177570
19338054_5 1154-1165 ProteinMutation denotes p.Asn281Ser rs141177570
19338054_6 1357-1367 ProteinMutation denotes p.Val38Met rs200050206
19338054_7 1372-1382 ProteinMutation denotes p.Val51Ala rs766080391
19338054_8 1447-1458 ProteinMutation denotes p.Met128Thr rs374235260
19338054_9 1464-1475 ProteinMutation denotes p.Cys289Arg rs369542041
19338054_10 1486-1497 ProteinMutation denotes p.Met128Thr rs374235260
19338054_11 1502-1513 ProteinMutation denotes p.Cys289Arg rs369542041
19338054_12 1622-1632 ProteinMutation denotes p.Val38Met rs200050206
19338054_13 1650-1660 ProteinMutation denotes p.Val51Ala rs766080391

sonoma2

Id Subject Object Predicate Lexical cue
T0 48-56 VAR denotes variants
T1 70-93 GENE denotes melanocortin 1 receptor
T2 94-99 REG denotes found
T3 103-111 DISEASE denotes melanoma
T4 126-149 GENE denotes melanocortin 1 receptor
T5 243-260 DISEASE denotes skin pigmentation
T6 307-315 DISEASE denotes melanoma
T7 322-326 GENE denotes MC1R
T8 349-367 MPA denotes synthesis of black
T9 378-412 MPA denotes photoprotective eumelanin pigments
T10 422-426 GENE denotes MC1R
T11 427-434 VAR denotes alleles
T12 439-449 REG denotes associated
T13 455-463 CPA denotes red hair
T14 455-463 DISEASE denotes red hair
T15 465-474 CPA denotes fair skin
T16 476-485 POSREG denotes increased
T17 486-497 MPA denotes sensitivity
T18 528-537 POSREG denotes increased
T19 538-549 DISEASE denotes skin cancer
T20 560-564 GENE denotes MC1R
T21 869-873 GENE denotes MC1R
T22 882-887 REG denotes found
T23 899-907 DISEASE denotes melanoma
T24 922-930 VAR denotes variants
T25 932-940 VAR denotes c.152T>C
T26 944-952 VAR denotes Val51Ala
T27 957-963 VAR denotes c.865T
T28 969-978 VAR denotes Cys289Arg
T29 1023-1029 VAR denotes c.112G
T30 1035-1043 VAR denotes Val38Met
T31 1045-1051 VAR denotes c.122C
T32 1057-1065 VAR denotes Ser41Phe
T33 1067-1073 VAR denotes c.383T
T34 1079-1088 VAR denotes Met128Thr
T35 1094-1100 VAR denotes c.842A
T36 1106-1115 VAR denotes Asn281Ser
T37 1156-1165 VAR denotes Asn281Ser
T38 1227-1236 VAR denotes mutations
T39 1241-1251 REG denotes associated
T40 1276-1280 NEGREG denotes loss
T41 1294-1297 NEGREG denotes LOF
T42 1314-1323 NEGREG denotes decreases
T43 1327-1335 MPA denotes coupling
T44 1343-1355 MPA denotes cAMP pathway
T45 1359-1367 VAR denotes Val38Met
T46 1374-1382 VAR denotes Val51Ala
T47 1403-1410 NEGREG denotes absence
T48 1414-1433 MPA denotes functional coupling
T49 1437-1445 VAR denotes Ser41Phe
T50 1449-1458 VAR denotes Met128Thr
T51 1466-1475 VAR denotes Cys289Arg
T52 1482-1485 NEGREG denotes LOF
T53 1488-1497 VAR denotes Met128Thr
T54 1504-1513 VAR denotes Cys289Arg
T55 1514-1521 VAR denotes mutants
T56 1566-1572 NEGREG denotes unable
T57 1624-1632 VAR denotes Val38Met
T58 1636-1644 VAR denotes Ser41Phe
T59 1652-1660 VAR denotes Val51Ala
T60 1671-1678 NEGREG denotes reduced
T61 1692-1702 MPA denotes expression
T62 1723-1732 MPA denotes retention
T63 1779-1782 NEGREG denotes LOF
T64 1786-1790 GENE denotes MC1R
T65 1791-1798 VAR denotes alleles
T66 1804-1808 GENE denotes eque
T67 1813-1823 REG denotes associated
T68 1846-1857 MPA denotes trafficking
T69 1897-1906 NEGREG denotes inability
R0 T0 T2 CauseOf variants,found
R1 T3 T2 ThemeOf melanoma,found
R2 T10 T11 ThemeOf MC1R,alleles
R3 T11 T12 CauseOf alleles,associated
R4 T11 T16 CauseOf alleles,increased
R5 T11 T18 CauseOf alleles,increased
R6 T13 T12 ThemeOf red hair,associated
R7 T15 T12 ThemeOf fair skin,associated
R8 T17 T16 ThemeOf sensitivity,increased
R9 T19 T16 ThemeOf skin cancer,increased
R10 T19 T18 ThemeOf skin cancer,increased
R11 T21 T24 ThemeOf MC1R,variants
R12 T21 T27 ThemeOf MC1R,c.865T
R13 T23 T22 ThemeOf melanoma,found
R14 T26 T24 ThemeOf Val51Ala,variants
R15 T29 T40 CauseOf c.112G,loss
R16 T31 T40 CauseOf c.122C,loss
R17 T33 T40 CauseOf c.383T,loss
R18 T35 T40 CauseOf c.842A,loss
R19 T38 T39 CauseOf mutations,associated
R20 T38 T40 CauseOf mutations,loss
R21 T38 T41 CauseOf mutations,LOF
R22 T38 T42 CauseOf mutations,decreases
R23 T38 T47 CauseOf mutations,absence
R24 T43 T42 ThemeOf coupling,decreases
R25 T44 T43 ThemeOf cAMP pathway,coupling
R26 T44 T42 ThemeOf cAMP pathway,decreases
R27 T45 T39 CauseOf Val38Met,associated
R28 T45 T40 CauseOf Val38Met,loss
R29 T45 T41 CauseOf Val38Met,LOF
R30 T45 T42 CauseOf Val38Met,decreases
R31 T45 T47 CauseOf Val38Met,absence
R32 T46 T39 CauseOf Val51Ala,associated
R33 T46 T40 CauseOf Val51Ala,loss
R34 T46 T41 CauseOf Val51Ala,LOF
R35 T46 T42 CauseOf Val51Ala,decreases
R36 T46 T47 CauseOf Val51Ala,absence
R37 T48 T47 ThemeOf functional coupling,absence
R38 T49 T40 CauseOf Ser41Phe,loss
R39 T49 T42 CauseOf Ser41Phe,decreases
R40 T49 T47 CauseOf Ser41Phe,absence
R41 T50 T40 CauseOf Met128Thr,loss
R42 T50 T42 CauseOf Met128Thr,decreases
R43 T50 T47 CauseOf Met128Thr,absence
R44 T51 T40 CauseOf Cys289Arg,loss
R45 T51 T42 CauseOf Cys289Arg,decreases
R46 T51 T47 CauseOf Cys289Arg,absence
R47 T53 T52 CauseOf Met128Thr,LOF
R48 T53 T56 CauseOf Met128Thr,unable
R49 T54 T52 CauseOf Cys289Arg,LOF
R50 T54 T56 CauseOf Cys289Arg,unable
R51 T55 T52 CauseOf mutants,LOF
R52 T55 T56 CauseOf mutants,unable
R53 T57 T60 CauseOf Val38Met,reduced
R54 T58 T60 CauseOf Ser41Phe,reduced
R55 T59 T60 CauseOf Val51Ala,reduced
R56 T61 T60 ThemeOf expression,reduced
R57 T64 T65 ThemeOf MC1R,alleles
R58 T65 T63 CauseOf alleles,LOF
R59 T65 T67 CauseOf alleles,associated
R60 T65 T69 CauseOf alleles,inability
R61 T68 T67 ThemeOf trafficking,associated

DisGeNET

Id Subject Object Predicate Lexical cue
T0 422-426 gene:4157 denotes MC1R
T1 538-549 disease:C0007114 denotes skin cancer
R1 T0 T1 associated_with MC1R,skin cancer

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
19338054-1#31#58#gene680 153-180 gene680 denotes Gs protein-coupled receptor
19338054-0#70#93#gene4157 70-93 gene4157 denotes melanocortin 1 receptor
19338054-0#103#111#diseaseC0025202 103-111 diseaseC0025202 denotes melanoma
19338054-1#31#58#gene57007 153-180 gene57007 denotes Gs protein-coupled receptor
19338054-1#31#58#gene148 153-180 gene148 denotes Gs protein-coupled receptor
19338054-1#31#58#gene151 153-180 gene151 denotes Gs protein-coupled receptor
19338054-1#31#58#gene10663 153-180 gene10663 denotes Gs protein-coupled receptor
19338054-1#31#58#gene1909 153-180 gene1909 denotes Gs protein-coupled receptor
19338054-1#31#58#gene2866 153-180 gene2866 denotes Gs protein-coupled receptor
19338054-1#31#58#gene9170 153-180 gene9170 denotes Gs protein-coupled receptor
19338054-1#31#58#gene6754 153-180 gene6754 denotes Gs protein-coupled receptor
19338054-1#185#193#diseaseC0025202 307-315 diseaseC0025202 denotes melanoma
19338054-3#8#12#gene4157 422-426 gene4157 denotes MC1R
19338054-3#124#135#diseaseC0007114 538-549 diseaseC0007114 denotes skin cancer
70#93#gene4157103#111#diseaseC0025202 19338054-0#70#93#gene4157 19338054-0#103#111#diseaseC0025202 associated_with melanocortin 1 receptor,melanoma
31#58#gene57007185#193#diseaseC0025202 19338054-1#31#58#gene57007 19338054-1#185#193#diseaseC0025202 associated_with Gs protein-coupled receptor,melanoma
31#58#gene148185#193#diseaseC0025202 19338054-1#31#58#gene148 19338054-1#185#193#diseaseC0025202 associated_with Gs protein-coupled receptor,melanoma
31#58#gene151185#193#diseaseC0025202 19338054-1#31#58#gene151 19338054-1#185#193#diseaseC0025202 associated_with Gs protein-coupled receptor,melanoma
31#58#gene680185#193#diseaseC0025202 19338054-1#31#58#gene680 19338054-1#185#193#diseaseC0025202 associated_with Gs protein-coupled receptor,melanoma
31#58#gene10663185#193#diseaseC0025202 19338054-1#31#58#gene10663 19338054-1#185#193#diseaseC0025202 associated_with Gs protein-coupled receptor,melanoma
31#58#gene1909185#193#diseaseC0025202 19338054-1#31#58#gene1909 19338054-1#185#193#diseaseC0025202 associated_with Gs protein-coupled receptor,melanoma
31#58#gene2866185#193#diseaseC0025202 19338054-1#31#58#gene2866 19338054-1#185#193#diseaseC0025202 associated_with Gs protein-coupled receptor,melanoma
31#58#gene9170185#193#diseaseC0025202 19338054-1#31#58#gene9170 19338054-1#185#193#diseaseC0025202 associated_with Gs protein-coupled receptor,melanoma
31#58#gene6754185#193#diseaseC0025202 19338054-1#31#58#gene6754 19338054-1#185#193#diseaseC0025202 associated_with Gs protein-coupled receptor,melanoma
8#12#gene4157124#135#diseaseC0007114 19338054-3#8#12#gene4157 19338054-3#124#135#diseaseC0007114 associated_with MC1R,skin cancer

kaiyin_test

Id Subject Object Predicate Lexical cue
T35 899-907 Disease denotes melanoma
T13 1154-1165 Var denotes p.Asn281Ser
T11 1196-1202 NegReg denotes silent
T12 1203-1215 MPA denotes polymorphism
T19 1314-1323 NegReg denotes decreases
T18 1327-1335 MPA denotes coupling
T20 1343-1355 Pathway denotes cAMP pathway
T26 1357-1367 Var denotes p.Val38Met
T27 1372-1382 Var denotes p.Val51Ala
T22 1403-1410 NegReg denotes absence
T21 1414-1433 MPA denotes functional coupling
T28 1435-1445 Var denotes p.Ser41Phe
T29 1447-1458 Var denotes p.Met128Thr
T30 1464-1475 Var denotes p.Cys289Arg
T32 1486-1497 Var denotes p.Met128Thr
T31 1502-1513 Var denotes p.Cys289Arg
T33 1566-1572 NegReg denotes unable
T34 1576-1580 Interaction denotes bind
T23 1622-1660 Var denotes p.Val38Met, p.Ser41Phe, and p.Val51Ala
T24 1671-1678 NegReg denotes reduced
T25 1679-1702 CPA denotes cell surface expression
R10 T12 T11 ThemeOf polymorphism,silent
R14 T23 T24 CauseOf "p.Val38Met, p.Ser41Phe, and p.Val51Ala",reduced
R15 T25 T24 ThemeOf cell surface expression,reduced
R17 T18 T19 ThemeOf coupling,decreases
R20 T21 T22 ThemeOf functional coupling,absence
R21 T20 T19 ThemeOf cAMP pathway,decreases
R22 T26 T19 CauseOf p.Val38Met,decreases
R23 T27 T19 CauseOf p.Val51Ala,decreases
R24 T28 T22 CauseOf p.Ser41Phe,absence
R25 T29 T22 CauseOf p.Met128Thr,absence
R26 T30 T22 CauseOf p.Cys289Arg,absence
R27 T31 T33 CauseOf p.Cys289Arg,unable
R28 T32 T33 CauseOf p.Met128Thr,unable
R29 T34 T33 ThemeOf bind,unable
R9 T13 T11 CauseOf p.Asn281Ser,silent

name_no

Id Subject Object Predicate Lexical cue
T35 899-907 Disease denotes melanoma
T13 1154-1165 Var denotes p.Asn281Ser
T11 1196-1202 NegReg denotes silent
T12 1203-1215 MPA denotes polymorphism
T19 1314-1323 NegReg denotes decreases
T18 1327-1335 MPA denotes coupling
T20 1343-1355 Pathway denotes cAMP pathway
T26 1357-1367 Var denotes p.Val38Met
T27 1372-1382 Var denotes p.Val51Ala
T22 1403-1410 NegReg denotes absence
T21 1414-1433 MPA denotes functional coupling
T28 1435-1445 Var denotes p.Ser41Phe
T29 1447-1458 Var denotes p.Met128Thr
T30 1464-1475 Var denotes p.Cys289Arg
T32 1486-1497 Var denotes p.Met128Thr
T31 1502-1513 Var denotes p.Cys289Arg
T33 1566-1572 NegReg denotes unable
T34 1576-1580 Interaction denotes bind
T23 1622-1660 Var denotes p.Val38Met, p.Ser41Phe, and p.Val51Ala
T24 1671-1678 NegReg denotes reduced
T25 1679-1702 CPA denotes cell surface expression
R10 T12 T11 ThemeOf polymorphism,silent
R14 T23 T24 CauseOf "p.Val38Met, p.Ser41Phe, and p.Val51Ala",reduced
R15 T25 T24 ThemeOf cell surface expression,reduced
R17 T18 T19 ThemeOf coupling,decreases
R20 T21 T22 ThemeOf functional coupling,absence
R21 T20 T19 ThemeOf cAMP pathway,decreases
R22 T26 T19 CauseOf p.Val38Met,decreases
R23 T27 T19 CauseOf p.Val51Ala,decreases
R24 T28 T22 CauseOf p.Ser41Phe,absence
R25 T29 T22 CauseOf p.Met128Thr,absence
R26 T30 T22 CauseOf p.Cys289Arg,absence
R27 T31 T33 CauseOf p.Cys289Arg,unable
R28 T32 T33 CauseOf p.Met128Thr,unable
R29 T34 T33 ThemeOf bind,unable
R9 T13 T11 CauseOf p.Asn281Ser,silent