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PubMed:19306381 / 690-927 JSONTXT

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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T6 0-237 Sentence denotes Hypothesizing that NRG-1 beta and/or NRG-1 alpha promote MPNST invasion, we found that NRG-1 beta promoted MPNST migration in a substrate-specific manner, markedly enhancing migration on laminin but not on collagen type I or fibronectin.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
5869 19-29 GeneOrGeneProduct denotes NRG-1 beta NCBIGene:3084
5870 37-48 GeneOrGeneProduct denotes NRG-1 alpha NCBIGene:3084
5871 57-62 DiseaseOrPhenotypicFeature denotes MPNST MESH:D018319
5872 87-97 GeneOrGeneProduct denotes NRG-1 beta NCBIGene:3084
5873 107-112 DiseaseOrPhenotypicFeature denotes MPNST MESH:D018319
5874 187-194 GeneOrGeneProduct denotes laminin NCBIGene:16777
5875 206-221 GeneOrGeneProduct denotes collagen type I NCBIGene:1277|NCBIGene:1278
5876 225-236 GeneOrGeneProduct denotes fibronectin NCBIGene:2335

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T23 19-24 GeneOrGeneProduct denotes NRG-1
T24 25-29 GeneOrGeneProduct denotes beta
T25 37-42 GeneOrGeneProduct denotes NRG-1
T26 43-48 GeneOrGeneProduct denotes alpha
T27 87-92 GeneOrGeneProduct denotes NRG-1
T28 93-97 GeneOrGeneProduct denotes beta
T29 123-127 GeneOrGeneProduct denotes in a
T30 155-163 GeneOrGeneProduct denotes markedly
T31 187-194 GeneOrGeneProduct denotes laminin
T32 206-214 GeneOrGeneProduct denotes collagen
T33 215-221 GeneOrGeneProduct denotes type I
T34 225-236 GeneOrGeneProduct denotes fibronectin

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T19 19-24 GeneOrGeneProduct denotes NRG-1
T20 25-29 GeneOrGeneProduct denotes beta
T21 37-42 GeneOrGeneProduct denotes NRG-1
T22 43-48 GeneOrGeneProduct denotes alpha
T23 87-92 GeneOrGeneProduct denotes NRG-1
T24 93-97 GeneOrGeneProduct denotes beta
T25 187-194 GeneOrGeneProduct denotes laminin
T26 206-214 GeneOrGeneProduct denotes collagen
T27 215-221 GeneOrGeneProduct denotes type I
T28 225-236 GeneOrGeneProduct denotes fibronectin

LitCoin-Disease-MeSH

Id Subject Object Predicate Lexical cue originalLabel
T9 57-62 DiseaseOrPhenotypicFeature denotes MPNST D018319
T10 107-112 DiseaseOrPhenotypicFeature denotes MPNST D018319

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T12 19-24 GeneOrGeneProduct denotes NRG-1
T13 37-42 GeneOrGeneProduct denotes NRG-1
T14 43-48 GeneOrGeneProduct denotes alpha
T15 87-92 GeneOrGeneProduct denotes NRG-1
T16 187-194 GeneOrGeneProduct denotes laminin
T17 206-214 GeneOrGeneProduct denotes collagen
T18 225-236 GeneOrGeneProduct denotes fibronectin

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T13 57-62 DiseaseOrPhenotypicFeature denotes MPNST 0017827
T14 107-112 DiseaseOrPhenotypicFeature denotes MPNST 0017827

LitCoin-MeSH-Disease-2

Id Subject Object Predicate Lexical cue ID:
T9 57-62 DiseaseOrPhenotypicFeature denotes MPNST D018319
T10 107-112 DiseaseOrPhenotypicFeature denotes MPNST D018319

LitCoin-MONDO_bioort2019

Id Subject Object Predicate Lexical cue #label
T9 57-62 DiseaseOrPhenotypicFeature denotes MPNST D018319
T10 107-112 DiseaseOrPhenotypicFeature denotes MPNST D018319

LitCoin-Chemical-MeSH-CHEBI

Id Subject Object Predicate Lexical cue ID:
T1 206-214 ChemicalEntity denotes collagen http://purl.obolibrary.org/obo/CHEBI_3815
T2 225-236 ChemicalEntity denotes fibronectin http://purl.obolibrary.org/obo/CHEBI_5058

LitCoin-training-merged

Id Subject Object Predicate Lexical cue #label ID:
T2 225-236 ChemicalEntity denotes fibronectin http://purl.obolibrary.org/obo/CHEBI_5058
T1 206-214 ChemicalEntity denotes collagen http://purl.obolibrary.org/obo/CHEBI_3815
T18 225-236 GeneOrGeneProduct denotes fibronectin
T17 206-214 GeneOrGeneProduct denotes collagen
T16 187-194 GeneOrGeneProduct denotes laminin
T15 87-92 GeneOrGeneProduct denotes NRG-1
T14 43-48 GeneOrGeneProduct denotes alpha
T13 37-42 GeneOrGeneProduct denotes NRG-1
T12 19-24 GeneOrGeneProduct denotes NRG-1
T5286 107-112 DiseaseOrPhenotypicFeature denotes MPNST D018319
T12087 57-62 DiseaseOrPhenotypicFeature denotes MPNST D018319

PMID_GLOBAL

Id Subject Object Predicate Lexical cue mondo_id
T14 57-62 DiseaseOrPhenotypicFeature denotes MPNST 0017827
T15 107-112 DiseaseOrPhenotypicFeature denotes MPNST 0017827