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PubMed:19300893 JSONTXT

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DisGeNET

Id Subject Object Predicate Lexical cue
T0 37-42 gene:90 denotes ACVR1
T1 55-92 disease:C0016037 denotes fibrodysplasia ossificans progressiva
R1 T0 T1 associated_with ACVR1,fibrodysplasia ossificans progressiva

DisGeNET5_variant_disease

Id Subject Object Predicate Lexical cue
19300893-0#21#29#geners121912678 21-29 geners121912678 denotes c.617G>A
19300893-0#55#92#diseaseC0016037 55-92 diseaseC0016037 denotes fibrodysplasia ossificans progressiva
21#29#geners12191267855#92#diseaseC0016037 19300893-0#21#29#geners121912678 19300893-0#55#92#diseaseC0016037 associated_with c.617G>A,fibrodysplasia ossificans progressiva

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
19300893-0#37#42#gene90 37-42 gene90 denotes ACVR1
19300893-0#55#92#diseaseC0016037 55-92 diseaseC0016037 denotes fibrodysplasia ossificans progressiva
37#42#gene9055#92#diseaseC0016037 19300893-0#37#42#gene90 19300893-0#55#92#diseaseC0016037 associated_with ACVR1,fibrodysplasia ossificans progressiva

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-117 Sentence denotes A recurrent mutation c.617G>A in the ACVR1 gene causes fibrodysplasia ossificans progressiva in two Chinese patients.
TextSentencer_T2 118-379 Sentence denotes Fibrodysplasia ossificans progressiva (FOP; OMIM 135100) is a rare heritable disorder of connective tissue characterized by congenital malformations of the great toes and recurrent episodes of painful soft tissue swelling that lead to heterotopic ossifications.
TextSentencer_T3 380-548 Sentence denotes Recent studies have shown that the ACVR1 (activin A receptor, type I; OMIM 102576) gene, which encodes the BMP type I receptor protein, is responsible for this disease.
TextSentencer_T4 549-783 Sentence denotes We observed two Chinese patients who suffered from progressive pain and ankylosis of major joints with congenital bilateral hallus valgus malformation, neck stiffness, and several posttraumatic ossified lesions on the head and dorsum.
TextSentencer_T5 784-827 Sentence denotes Both patients were diagnosed as having FOP.
TextSentencer_T6 828-908 Sentence denotes This study aimed to investigate the ACVR1 gene mutation in Chinese FOP patients.
TextSentencer_T7 909-1096 Sentence denotes Direct sequence analysis of genomic DNA and restriction enzyme digestion demonstrated the presence of a single heterozygous c.617G>A (p.R206H) mutation in the ACVR1 gene in both patients.
TextSentencer_T8 1097-1203 Sentence denotes This mutation is first reported in Chinese patients with FOP and it was de novo in both affected families.
T1 0-117 Sentence denotes A recurrent mutation c.617G>A in the ACVR1 gene causes fibrodysplasia ossificans progressiva in two Chinese patients.
T2 118-379 Sentence denotes Fibrodysplasia ossificans progressiva (FOP; OMIM 135100) is a rare heritable disorder of connective tissue characterized by congenital malformations of the great toes and recurrent episodes of painful soft tissue swelling that lead to heterotopic ossifications.
T3 380-548 Sentence denotes Recent studies have shown that the ACVR1 (activin A receptor, type I; OMIM 102576) gene, which encodes the BMP type I receptor protein, is responsible for this disease.
T4 549-783 Sentence denotes We observed two Chinese patients who suffered from progressive pain and ankylosis of major joints with congenital bilateral hallus valgus malformation, neck stiffness, and several posttraumatic ossified lesions on the head and dorsum.
T5 784-827 Sentence denotes Both patients were diagnosed as having FOP.
T6 828-908 Sentence denotes This study aimed to investigate the ACVR1 gene mutation in Chinese FOP patients.
T7 909-1096 Sentence denotes Direct sequence analysis of genomic DNA and restriction enzyme digestion demonstrated the presence of a single heterozygous c.617G>A (p.R206H) mutation in the ACVR1 gene in both patients.
T8 1097-1203 Sentence denotes This mutation is first reported in Chinese patients with FOP and it was de novo in both affected families.

PubCasesHPO

Id Subject Object Predicate Lexical cue
AB1 612-616 HP:0012531 denotes pain
AB2 621-630 HP:0031013 denotes ankylosis

PubCasesORDO

Id Subject Object Predicate Lexical cue
AB1 118-155 ORDO:337 denotes Fibrodysplasia ossificans progressiva
AB2 157-160 ORDO:337 denotes FOP
TI1 55-92 ORDO:337 denotes fibrodysplasia ossificans progressiva
AB3 823-826 ORDO:337 denotes FOP
AB4 895-898 ORDO:337 denotes FOP
AB5 1154-1157 ORDO:337 denotes FOP

UBERON-AE

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 207-224 http://purl.obolibrary.org/obo/UBERON_0002384 denotes connective tissue
PD-UBERON-AE-B_T2 218-224 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T3 324-330 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T4 701-705 http://purl.obolibrary.org/obo/UBERON_0000974 denotes neck
PD-UBERON-AE-B_T5 767-771 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
PD-UBERON-AE-B_T6 776-782 http://purl.obolibrary.org/obo/UBERON_0001137 denotes dorsum

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 767-771 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
PD-UBERON-AE-B_T2 218-224 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T3 324-330 http://purl.obolibrary.org/obo/UBERON_0000479 denotes tissue
PD-UBERON-AE-B_T4 207-224 http://purl.obolibrary.org/obo/UBERON_0002384 denotes connective tissue
PD-UBERON-AE-B_T5 701-705 http://purl.obolibrary.org/obo/UBERON_0000974 denotes neck
PD-UBERON-AE-B_T6 776-782 http://purl.obolibrary.org/obo/UBERON_0001137 denotes dorsum