PubMed:19270074 / 938-1169 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PubMed/sourceid/19270074","sourcedb":"PubMed","sourceid":"19270074","source_url":"http://www.ncbi.nlm.nih.gov/pubmed/19270074","text":"We validate the algorithm with (i) in silico-generated spectra, with or without deteriorating deletions, (ii) with a purified glycoprotein transferrin, and (iii) with a complex mixture of N-glycopeptides enriched from human plasma.","tracks":[{"project":"sentences","denotations":[{"id":"TextSentencer_T7","span":{"begin":0,"end":231},"obj":"Sentence"},{"id":"T7","span":{"begin":0,"end":231},"obj":"Sentence"},{"id":"T7","span":{"begin":0,"end":231},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"TextSentencer_T7","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"},{"subj":"T7","pred":"source","obj":"sentences"}]},{"project":"GlycoBiology-FMA","denotations":[{"id":"_T27","span":{"begin":126,"end":138},"obj":"FMAID:62925"},{"id":"_T28","span":{"begin":126,"end":138},"obj":"FMAID:167256"},{"id":"_T29","span":{"begin":190,"end":203},"obj":"FMAID:82784"},{"id":"_T30","span":{"begin":190,"end":203},"obj":"FMAID:196778"},{"id":"_T31","span":{"begin":224,"end":230},"obj":"FMAID:162307"}],"namespaces":[{"prefix":"FMAID","uri":"http://purl.org/sig/ont/fma/fma"}],"attributes":[{"subj":"_T27","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T28","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T29","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T30","pred":"source","obj":"GlycoBiology-FMA"},{"subj":"_T31","pred":"source","obj":"GlycoBiology-FMA"}]},{"project":"uniprot-human","denotations":[{"id":"T9","span":{"begin":106,"end":108},"obj":"http://www.uniprot.org/uniprot/Q8SNA0"},{"id":"T10","span":{"begin":139,"end":150},"obj":"http://www.uniprot.org/uniprot/P02787"}],"attributes":[{"subj":"T9","pred":"source","obj":"uniprot-human"},{"subj":"T10","pred":"source","obj":"uniprot-human"}]},{"project":"uniprot-mouse","denotations":[{"id":"T9","span":{"begin":106,"end":108},"obj":"http://www.uniprot.org/uniprot/P04441"},{"id":"T10","span":{"begin":139,"end":150},"obj":"http://www.uniprot.org/uniprot/Q63915"}],"attributes":[{"subj":"T9","pred":"source","obj":"uniprot-mouse"},{"subj":"T10","pred":"source","obj":"uniprot-mouse"}]},{"project":"GO-CC","denotations":[{"id":"T1","span":{"begin":157,"end":176},"obj":"http://purl.obolibrary.org/obo/GO_0045275"}],"attributes":[{"subj":"T1","pred":"source","obj":"GO-CC"}]},{"project":"NCBITAXON","denotations":[{"id":"T1","span":{"begin":218,"end":223},"obj":"OrganismTaxon"}],"attributes":[{"id":"A1","pred":"db_id","subj":"T1","obj":"9606"},{"subj":"T1","pred":"source","obj":"NCBITAXON"}]},{"project":"Anatomy-UBERON","denotations":[{"id":"T1","span":{"begin":224,"end":230},"obj":"Body_part"}],"attributes":[{"id":"A1","pred":"uberon_id","subj":"T1","obj":"http://purl.obolibrary.org/obo/UBERON_0001969"},{"subj":"T1","pred":"source","obj":"Anatomy-UBERON"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"sentences","color":"#93e3ec","default":true},{"id":"GlycoBiology-FMA","color":"#ecdb93"},{"id":"uniprot-human","color":"#c193ec"},{"id":"uniprot-mouse","color":"#93eca7"},{"id":"GO-CC","color":"#ec9398"},{"id":"NCBITAXON","color":"#93b2ec"},{"id":"Anatomy-UBERON","color":"#ccec93"}]}]}}