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PubMed:19218400 JSONTXT

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Glycan-Motif

Id Subject Object Predicate Lexical cue
T1 29-35 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose
T2 1274-1280 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose
T3 1393-1399 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose

GlyCosmos6-Glycan-Motif-Image

Id Subject Object Predicate Lexical cue image
T1 29-35 Glycan_Motif denotes fucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82576YO
T2 1274-1280 Glycan_Motif denotes fucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82576YO
T3 1393-1399 Glycan_Motif denotes fucose https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G82576YO

GlyCosmos6-Glycan-Motif-Structure

Id Subject Object Predicate Lexical cue
T1 29-35 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose
T2 1274-1280 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose
T3 1393-1399 https://glytoucan.org/Structures/Glycans/G82576YO denotes fucose

sentences

Id Subject Object Predicate Lexical cue
TextSentencer_T1 0-128 Sentence denotes Comparative analysis of core-fucose-binding lectins from Lens culinaris and Pisum sativum using frontal affinity chromatography.
TextSentencer_T2 129-356 Sentence denotes Lens culinaris lectin (LCA) is a useful probe for the detection in serum of a core-fucosylated alpha-fetoprotein, called AFP-L3 fraction, which is a well-known marker for the diagnosis and prognosis of hepatocellular carcinoma.
TextSentencer_T3 357-600 Sentence denotes Here we performed a systematic quantitative interaction analysis of LCA and its close homolog, Pisum sativum lectin (PSA), by frontal affinity chromatography with 143 pyridylaminated (PA) glycans including a series of core-fucosylated glycans.
TextSentencer_T4 601-875 Sentence denotes Both lectins showed binding affinity to core-fucosylated, mono- and bi-antennary N-glycans, but not to their tri- and tetra-antennary forms, indicating that the addition of the GlcNAc residue at the N-acetylglucosaminyltransferase IV position abrogates the binding affinity.
TextSentencer_T5 876-1158 Sentence denotes However, their specificities are distinguishable: while LCA showed the highest affinity to the core-fucosylated, agalactosylated, bi-antennary N-glycan (K(a)=1.1 x 10(5) M(-1)), PSA showed the highest affinity to the core-fucosylated, trimannosyl structure (K(a)=1.2 x 10(5) M(-1)).
TextSentencer_T6 1159-1353 Sentence denotes Glycan-binding specificities of LCA and PSA were also analyzed by glycoconjugate microarray compared to other core-fucose-binding lectins from Aspergillus oryzae (AOL) and Aleuria auratia (AAL).
TextSentencer_T7 1354-1472 Sentence denotes LCA and PSA bound specifically to core fucose, whereas AOL and AAL exhibited broad specificity to fucosylated glycans.
TextSentencer_T8 1473-1648 Sentence denotes These results explain why LCA is appropriate as a specific probe for AFP-L3, which mainly contains a core-fucosylated, biantennary N-glycan, but not its highly branched forms.
T1 0-128 Sentence denotes Comparative analysis of core-fucose-binding lectins from Lens culinaris and Pisum sativum using frontal affinity chromatography.
T2 129-356 Sentence denotes Lens culinaris lectin (LCA) is a useful probe for the detection in serum of a core-fucosylated alpha-fetoprotein, called AFP-L3 fraction, which is a well-known marker for the diagnosis and prognosis of hepatocellular carcinoma.
T3 357-600 Sentence denotes Here we performed a systematic quantitative interaction analysis of LCA and its close homolog, Pisum sativum lectin (PSA), by frontal affinity chromatography with 143 pyridylaminated (PA) glycans including a series of core-fucosylated glycans.
T4 601-875 Sentence denotes Both lectins showed binding affinity to core-fucosylated, mono- and bi-antennary N-glycans, but not to their tri- and tetra-antennary forms, indicating that the addition of the GlcNAc residue at the N-acetylglucosaminyltransferase IV position abrogates the binding affinity.
T5 876-1158 Sentence denotes However, their specificities are distinguishable: while LCA showed the highest affinity to the core-fucosylated, agalactosylated, bi-antennary N-glycan (K(a)=1.1 x 10(5) M(-1)), PSA showed the highest affinity to the core-fucosylated, trimannosyl structure (K(a)=1.2 x 10(5) M(-1)).
T6 1159-1353 Sentence denotes Glycan-binding specificities of LCA and PSA were also analyzed by glycoconjugate microarray compared to other core-fucose-binding lectins from Aspergillus oryzae (AOL) and Aleuria auratia (AAL).
T7 1354-1472 Sentence denotes LCA and PSA bound specifically to core fucose, whereas AOL and AAL exhibited broad specificity to fucosylated glycans.
T8 1473-1648 Sentence denotes These results explain why LCA is appropriate as a specific probe for AFP-L3, which mainly contains a core-fucosylated, biantennary N-glycan, but not its highly branched forms.
T1 0-128 Sentence denotes Comparative analysis of core-fucose-binding lectins from Lens culinaris and Pisum sativum using frontal affinity chromatography.
T2 129-356 Sentence denotes Lens culinaris lectin (LCA) is a useful probe for the detection in serum of a core-fucosylated alpha-fetoprotein, called AFP-L3 fraction, which is a well-known marker for the diagnosis and prognosis of hepatocellular carcinoma.
T3 357-600 Sentence denotes Here we performed a systematic quantitative interaction analysis of LCA and its close homolog, Pisum sativum lectin (PSA), by frontal affinity chromatography with 143 pyridylaminated (PA) glycans including a series of core-fucosylated glycans.
T4 601-875 Sentence denotes Both lectins showed binding affinity to core-fucosylated, mono- and bi-antennary N-glycans, but not to their tri- and tetra-antennary forms, indicating that the addition of the GlcNAc residue at the N-acetylglucosaminyltransferase IV position abrogates the binding affinity.
T5 876-1158 Sentence denotes However, their specificities are distinguishable: while LCA showed the highest affinity to the core-fucosylated, agalactosylated, bi-antennary N-glycan (K(a)=1.1 x 10(5) M(-1)), PSA showed the highest affinity to the core-fucosylated, trimannosyl structure (K(a)=1.2 x 10(5) M(-1)).
T6 1159-1353 Sentence denotes Glycan-binding specificities of LCA and PSA were also analyzed by glycoconjugate microarray compared to other core-fucose-binding lectins from Aspergillus oryzae (AOL) and Aleuria auratia (AAL).
T7 1354-1472 Sentence denotes LCA and PSA bound specifically to core fucose, whereas AOL and AAL exhibited broad specificity to fucosylated glycans.
T8 1473-1648 Sentence denotes These results explain why LCA is appropriate as a specific probe for AFP-L3, which mainly contains a core-fucosylated, biantennary N-glycan, but not its highly branched forms.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 57-61 http://purl.obolibrary.org/obo/MAT_0000141 denotes Lens
T2 129-133 http://purl.obolibrary.org/obo/MAT_0000141 denotes Lens

GlycoBiology-FMA

Id Subject Object Predicate Lexical cue
_T1 29-35 FMAID:196784 denotes fucose
_T2 29-35 FMAID:82790 denotes fucose
_T3 57-61 FMAID:58241 denotes Lens
_T4 57-61 FMAID:158042 denotes Lens
_T5 90-103 FMAID:148640 denotes using frontal
_T6 90-103 FMAID:215016 denotes using frontal
_T7 96-103 FMAID:74536 denotes frontal
_T8 96-103 FMAID:274210 denotes frontal
_T9 96-103 FMAID:179273 denotes frontal
_T10 129-133 FMAID:58241 denotes Lens
_T11 129-133 FMAID:158042 denotes Lens
_T12 196-201 FMAID:167330 denotes serum
_T13 224-241 FMAID:231302 denotes alpha-fetoprotein
_T14 224-241 FMAID:231303 denotes alpha-fetoprotein
_T15 254-256 FMAID:167746 denotes L3
_T16 254-256 FMAID:63518 denotes L3
_T17 483-490 FMAID:74536 denotes frontal
_T18 483-490 FMAID:179273 denotes frontal
_T19 483-490 FMAID:274210 denotes frontal
_T20 1225-1239 FMAID:82782 denotes glycoconjugate
_T21 1225-1239 FMAID:196776 denotes glycoconjugate
_T22 1274-1280 FMAID:82790 denotes fucose
_T23 1274-1280 FMAID:196784 denotes fucose
_T24 1393-1399 FMAID:196784 denotes fucose
_T25 1393-1399 FMAID:82790 denotes fucose
_T26 1546-1548 FMAID:167746 denotes L3
_T27 1546-1548 FMAID:63518 denotes L3
_T28 1633-1641 FMAID:226028 denotes branched
_T29 1633-1641 FMAID:226027 denotes branched

uniprot-human

Id Subject Object Predicate Lexical cue
T1 224-241 http://www.uniprot.org/uniprot/P02771 denotes alpha-fetoprotein
T2 250-253 http://www.uniprot.org/uniprot/P02771 denotes AFP
T3 1542-1545 http://www.uniprot.org/uniprot/P02771 denotes AFP
T4 250-253 http://www.uniprot.org/uniprot/Q12899 denotes AFP
T5 1542-1545 http://www.uniprot.org/uniprot/Q12899 denotes AFP
T6 254-256 http://www.uniprot.org/uniprot/Q96MH2 denotes L3
T7 1546-1548 http://www.uniprot.org/uniprot/Q96MH2 denotes L3
T8 474-477 http://www.uniprot.org/uniprot/Q9Y617 denotes PSA
T9 1054-1057 http://www.uniprot.org/uniprot/Q9Y617 denotes PSA
T10 1199-1202 http://www.uniprot.org/uniprot/Q9Y617 denotes PSA
T11 1362-1365 http://www.uniprot.org/uniprot/Q9Y617 denotes PSA
T12 474-477 http://www.uniprot.org/uniprot/P55786 denotes PSA
T13 1054-1057 http://www.uniprot.org/uniprot/P55786 denotes PSA
T14 1199-1202 http://www.uniprot.org/uniprot/P55786 denotes PSA
T15 1362-1365 http://www.uniprot.org/uniprot/P55786 denotes PSA
T16 474-477 http://www.uniprot.org/uniprot/P07288 denotes PSA
T17 1054-1057 http://www.uniprot.org/uniprot/P07288 denotes PSA
T18 1199-1202 http://www.uniprot.org/uniprot/P07288 denotes PSA
T19 1362-1365 http://www.uniprot.org/uniprot/P07288 denotes PSA
T20 541-543 http://www.uniprot.org/uniprot/P04746 denotes PA
T21 541-543 http://www.uniprot.org/uniprot/Q9UL45 denotes PA
T22 800-831 http://www.uniprot.org/uniprot/Q06430 denotes N-acetylglucosaminyltransferase
T23 800-831 http://www.uniprot.org/uniprot/Q8N0V5 denotes N-acetylglucosaminyltransferase
T24 800-831 http://www.uniprot.org/uniprot/Q8NFS9 denotes N-acetylglucosaminyltransferase
T25 800-834 http://www.uniprot.org/uniprot/Q9UBM8 denotes N-acetylglucosaminyltransferase IV

uniprot-mouse

Id Subject Object Predicate Lexical cue
T1 224-241 http://www.uniprot.org/uniprot/P02772 denotes alpha-fetoprotein
T2 254-256 http://www.uniprot.org/uniprot/O35652 denotes L3
T3 1546-1548 http://www.uniprot.org/uniprot/O35652 denotes L3
T4 474-477 http://www.uniprot.org/uniprot/Q11011 denotes PSA
T5 1054-1057 http://www.uniprot.org/uniprot/Q11011 denotes PSA
T6 1199-1202 http://www.uniprot.org/uniprot/Q11011 denotes PSA
T7 1362-1365 http://www.uniprot.org/uniprot/Q11011 denotes PSA
T8 541-543 http://www.uniprot.org/uniprot/P00688 denotes PA
T9 800-831 http://www.uniprot.org/uniprot/P97402 denotes N-acetylglucosaminyltransferase
T10 1046-1050 http://www.uniprot.org/uniprot/P17717 denotes M(-1
T11 1151-1155 http://www.uniprot.org/uniprot/P17717 denotes M(-1

GlycoBiology-NCBITAXON

Id Subject Object Predicate Lexical cue
T1 57-61 http://purl.bioontology.org/ontology/NCBITAXON/3863 denotes Lens
T2 57-71 http://purl.bioontology.org/ontology/NCBITAXON/3864 denotes Lens culinaris
T3 76-81 http://purl.bioontology.org/ontology/NCBITAXON/3887 denotes Pisum
T4 76-89 http://purl.bioontology.org/ontology/NCBITAXON/3888 denotes Pisum sativum
T5 129-133 http://purl.bioontology.org/ontology/NCBITAXON/3863 denotes Lens
T6 129-143 http://purl.bioontology.org/ontology/NCBITAXON/3864 denotes Lens culinaris
T7 346-355 http://purl.bioontology.org/ontology/NCBITAXON/166034 denotes carcinoma
T8 452-457 http://purl.bioontology.org/ontology/NCBITAXON/3887 denotes Pisum
T9 452-465 http://purl.bioontology.org/ontology/NCBITAXON/3888 denotes Pisum sativum
T10 672-681 http://purl.bioontology.org/ontology/NCBITAXON/293542 denotes antennary
T11 719-724 http://purl.bioontology.org/ontology/NCBITAXON/1310384 denotes tetra
T12 719-724 http://purl.bioontology.org/ontology/NCBITAXON/85284 denotes tetra
T13 725-734 http://purl.bioontology.org/ontology/NCBITAXON/293542 denotes antennary
T14 1009-1018 http://purl.bioontology.org/ontology/NCBITAXON/293542 denotes antennary
T15 1302-1313 http://purl.bioontology.org/ontology/NCBITAXON/40382 denotes Aspergillus
T16 1302-1313 http://purl.bioontology.org/ontology/NCBITAXON/454240 denotes Aspergillus
T17 1302-1313 http://purl.bioontology.org/ontology/NCBITAXON/41750 denotes Aspergillus
T18 1314-1320 http://purl.bioontology.org/ontology/NCBITAXON/4527 denotes oryzae
T19 1331-1338 http://purl.bioontology.org/ontology/NCBITAXON/5187 denotes Aleuria
T20 1331-1346 http://purl.bioontology.org/ontology/NCBITAXON/5188 denotes Aleuria auratia

GO-BP

Id Subject Object Predicate Lexical cue
T1 212-223 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T2 580-591 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T3 646-657 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T4 976-987 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T5 1098-1109 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T6 1452-1463 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T7 1579-1590 http://purl.obolibrary.org/obo/GO_0036065 denotes fucosylated
T8 800-834 http://purl.obolibrary.org/obo/GO_0008454 denotes N-acetylglucosaminyltransferase IV

GO-MF

Id Subject Object Predicate Lexical cue
T1 29-43 http://purl.obolibrary.org/obo/GO_0042806 denotes fucose-binding
T2 1274-1288 http://purl.obolibrary.org/obo/GO_0042806 denotes fucose-binding
T3 36-43 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T4 621-628 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T5 858-865 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T6 1166-1173 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T7 1281-1288 http://purl.obolibrary.org/obo/GO_0070026 denotes binding
T8 36-43 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T9 621-628 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T10 858-865 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T11 1166-1173 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T12 1281-1288 http://purl.obolibrary.org/obo/GO_0003680 denotes binding
T13 36-43 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T14 621-628 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T15 858-865 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T16 1166-1173 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T17 1281-1288 http://purl.obolibrary.org/obo/GO_0017091 denotes binding
T18 36-43 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T19 621-628 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T20 858-865 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T21 1166-1173 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T22 1281-1288 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

GO-CC

Id Subject Object Predicate Lexical cue
T1 24-28 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T2 207-211 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T3 575-579 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T4 641-645 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T5 971-975 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T6 1093-1097 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T7 1269-1273 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T8 1388-1392 http://purl.obolibrary.org/obo/GO_0019013 denotes core
T9 1574-1578 http://purl.obolibrary.org/obo/GO_0019013 denotes core

UBERON-AE

Id Subject Object Predicate Lexical cue
T1 196-201 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum

NGLY1-deficiency

Id Subject Object Predicate Lexical cue
PD-NGLY1-deficiency-B_T1 778-784 chem:24139 denotes GlcNAc

GlycoBiology-MAT

Id Subject Object Predicate Lexical cue
T1 57-61 http://purl.obolibrary.org/obo/MAT_0000141 denotes Lens
T2 129-133 http://purl.obolibrary.org/obo/MAT_0000141 denotes Lens

GlycoBiology-Motifs

Id Subject Object Predicate Lexical cue
T1 682-691 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycans
T2 1019-1027 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycan
T3 1604-1612 http://rdf.glycoinfo.org/glycan/G00027MO denotes N-glycan

Lectin

Id Subject Object Predicate Lexical cue
Lectin_T1 152-155 https://acgg.asia/db/lfdb/LfDB0171 denotes LCA
Lectin_T2 425-428 https://acgg.asia/db/lfdb/LfDB0171 denotes LCA
Lectin_T3 932-935 https://acgg.asia/db/lfdb/LfDB0171 denotes LCA
Lectin_T4 1191-1194 https://acgg.asia/db/lfdb/LfDB0171 denotes LCA
Lectin_T5 1354-1357 https://acgg.asia/db/lfdb/LfDB0171 denotes LCA
Lectin_T6 1499-1502 https://acgg.asia/db/lfdb/LfDB0171 denotes LCA
Lectin_T7 474-477 https://acgg.asia/db/lfdb/LfDB0181 denotes PSA
Lectin_T8 1054-1057 https://acgg.asia/db/lfdb/LfDB0181 denotes PSA
Lectin_T9 1199-1202 https://acgg.asia/db/lfdb/LfDB0181 denotes PSA
Lectin_T10 1362-1365 https://acgg.asia/db/lfdb/LfDB0181 denotes PSA

GlyTouCan-IUPAC

Id Subject Object Predicate Lexical cue
GlycanIUPAC_T1 710-713 "http://rdf.glycoinfo.org/glycan/G44384WF" denotes tri
GlycanIUPAC_T2 710-713 "http://rdf.glycoinfo.org/glycan/G37452RG" denotes tri
GlycanIUPAC_T3 710-713 "http://rdf.glycoinfo.org/glycan/G56296FC" denotes tri
GlycanIUPAC_T4 710-713 "http://rdf.glycoinfo.org/glycan/G44877OG" denotes tri
GlycanIUPAC_T5 710-713 "http://rdf.glycoinfo.org/glycan/G22627HB" denotes tri
GlycanIUPAC_T6 710-713 "http://rdf.glycoinfo.org/glycan/G76069IP" denotes tri
GlycanIUPAC_T7 710-713 "http://rdf.glycoinfo.org/glycan/G77301LL" denotes tri
GlycanIUPAC_T8 710-713 "http://rdf.glycoinfo.org/glycan/G92446EV" denotes tri
GlycanIUPAC_T9 710-713 "http://rdf.glycoinfo.org/glycan/G93798MG" denotes tri
GlycanIUPAC_T10 710-713 "http://rdf.glycoinfo.org/glycan/G19180VS" denotes tri
GlycanIUPAC_T11 710-713 "http://rdf.glycoinfo.org/glycan/G00261CT" denotes tri
GlycanIUPAC_T12 710-713 "http://rdf.glycoinfo.org/glycan/G23925MM" denotes tri
GlycanIUPAC_T13 710-713 "http://rdf.glycoinfo.org/glycan/G27176LA" denotes tri
GlycanIUPAC_T14 710-713 "http://rdf.glycoinfo.org/glycan/G76226NF" denotes tri
GlycanIUPAC_T15 710-713 "http://rdf.glycoinfo.org/glycan/G80006GG" denotes tri
GlycanIUPAC_T16 710-713 "http://rdf.glycoinfo.org/glycan/G99968MY" denotes tri
GlycanIUPAC_T17 710-713 "http://rdf.glycoinfo.org/glycan/G67393MB" denotes tri
GlycanIUPAC_T18 710-713 "http://rdf.glycoinfo.org/glycan/G09037VU" denotes tri
GlycanIUPAC_T19 710-713 "http://rdf.glycoinfo.org/glycan/G19508PX" denotes tri
GlycanIUPAC_T20 710-713 "http://rdf.glycoinfo.org/glycan/G40619ZS" denotes tri
GlycanIUPAC_T21 710-713 "http://rdf.glycoinfo.org/glycan/G19507SX" denotes tri
GlycanIUPAC_T22 710-713 "http://rdf.glycoinfo.org/glycan/G50874XT" denotes tri
GlycanIUPAC_T23 710-713 "http://rdf.glycoinfo.org/glycan/G60561GL" denotes tri
GlycanIUPAC_T24 710-713 "http://rdf.glycoinfo.org/glycan/G98788DE" denotes tri
GlycanIUPAC_T25 710-713 "http://rdf.glycoinfo.org/glycan/G85696MX" denotes tri
GlycanIUPAC_T26 710-713 "http://rdf.glycoinfo.org/glycan/G82652IN" denotes tri
GlycanIUPAC_T27 710-713 "http://rdf.glycoinfo.org/glycan/G95603AK" denotes tri
GlycanIUPAC_T28 710-713 "http://rdf.glycoinfo.org/glycan/G87993NJ" denotes tri
GlycanIUPAC_T29 710-713 "http://rdf.glycoinfo.org/glycan/G85533KK" denotes tri
GlycanIUPAC_T30 710-713 "http://rdf.glycoinfo.org/glycan/G78142NX" denotes tri
GlycanIUPAC_T31 710-713 "http://rdf.glycoinfo.org/glycan/G94944YR" denotes tri
GlycanIUPAC_T32 710-713 "http://rdf.glycoinfo.org/glycan/G60875EM" denotes tri
GlycanIUPAC_T33 710-713 "http://rdf.glycoinfo.org/glycan/G58390SD" denotes tri
GlycanIUPAC_T34 710-713 "http://rdf.glycoinfo.org/glycan/G46314WZ" denotes tri
GlycanIUPAC_T35 710-713 "http://rdf.glycoinfo.org/glycan/G35012MY" denotes tri
GlycanIUPAC_T36 710-713 "http://rdf.glycoinfo.org/glycan/G11847VZ" denotes tri
GlycanIUPAC_T37 710-713 "http://rdf.glycoinfo.org/glycan/G91662AB" denotes tri
GlycanIUPAC_T38 710-713 "http://rdf.glycoinfo.org/glycan/G99771WN" denotes tri
GlycanIUPAC_T39 710-713 "http://rdf.glycoinfo.org/glycan/G92389SI" denotes tri
GlycanIUPAC_T40 710-713 "http://rdf.glycoinfo.org/glycan/G40437FC" denotes tri
GlycanIUPAC_T41 710-713 "http://rdf.glycoinfo.org/glycan/G00509WV" denotes tri
GlycanIUPAC_T42 710-713 "http://rdf.glycoinfo.org/glycan/G36565LB" denotes tri
GlycanIUPAC_T43 710-713 "http://rdf.glycoinfo.org/glycan/G50335BH" denotes tri
GlycanIUPAC_T44 710-713 "http://rdf.glycoinfo.org/glycan/G87946UV" denotes tri
GlycanIUPAC_T45 710-713 "http://rdf.glycoinfo.org/glycan/G99103VB" denotes tri
GlycanIUPAC_T46 710-713 "http://rdf.glycoinfo.org/glycan/G99530XJ" denotes tri
GlycanIUPAC_T47 710-713 "http://rdf.glycoinfo.org/glycan/G64132OC" denotes tri
GlycanIUPAC_T48 710-713 "http://rdf.glycoinfo.org/glycan/G96071SL" denotes tri
GlycanIUPAC_T49 710-713 "http://rdf.glycoinfo.org/glycan/G11932TO" denotes tri
GlycanIUPAC_T50 710-713 "http://rdf.glycoinfo.org/glycan/G71952HE" denotes tri
GlycanIUPAC_T51 710-713 "http://rdf.glycoinfo.org/glycan/G40960ZM" denotes tri
GlycanIUPAC_T52 710-713 "http://rdf.glycoinfo.org/glycan/G99023OP" denotes tri
GlycanIUPAC_T53 710-713 "http://rdf.glycoinfo.org/glycan/G75940FW" denotes tri
GlycanIUPAC_T54 710-713 "http://rdf.glycoinfo.org/glycan/G05449DN" denotes tri
GlycanIUPAC_T55 710-713 "http://rdf.glycoinfo.org/glycan/G12045NX" denotes tri
GlycanIUPAC_T56 710-713 "http://rdf.glycoinfo.org/glycan/G23531GF" denotes tri
GlycanIUPAC_T57 710-713 "http://rdf.glycoinfo.org/glycan/G83439GF" denotes tri
GlycanIUPAC_T58 710-713 "http://rdf.glycoinfo.org/glycan/G38120XA" denotes tri
GlycanIUPAC_T59 710-713 "http://rdf.glycoinfo.org/glycan/G09257XC" denotes tri
GlycanIUPAC_T60 710-713 "http://rdf.glycoinfo.org/glycan/G67867AY" denotes tri
GlycanIUPAC_T61 710-713 "http://rdf.glycoinfo.org/glycan/G70826LI" denotes tri
GlycanIUPAC_T62 710-713 "http://rdf.glycoinfo.org/glycan/G01893YT" denotes tri
GlycanIUPAC_T63 710-713 "http://rdf.glycoinfo.org/glycan/G57032UK" denotes tri
GlycanIUPAC_T64 710-713 "http://rdf.glycoinfo.org/glycan/G82566JW" denotes tri
GlycanIUPAC_T65 710-713 "http://rdf.glycoinfo.org/glycan/G03647LB" denotes tri
GlycanIUPAC_T66 710-713 "http://rdf.glycoinfo.org/glycan/G30298YA" denotes tri
GlycanIUPAC_T67 710-713 "http://rdf.glycoinfo.org/glycan/G12237BJ" denotes tri
GlycanIUPAC_T68 710-713 "http://rdf.glycoinfo.org/glycan/G35293BQ" denotes tri
GlycanIUPAC_T69 710-713 "http://rdf.glycoinfo.org/glycan/G56939XC" denotes tri
GlycanIUPAC_T70 710-713 "http://rdf.glycoinfo.org/glycan/G57481VS" denotes tri
GlycanIUPAC_T71 710-713 "http://rdf.glycoinfo.org/glycan/G12760VJ" denotes tri
GlycanIUPAC_T72 710-713 "http://rdf.glycoinfo.org/glycan/G78749LG" denotes tri
GlycanIUPAC_T73 710-713 "http://rdf.glycoinfo.org/glycan/G18179BX" denotes tri
GlycanIUPAC_T74 710-713 "http://rdf.glycoinfo.org/glycan/G97803IP" denotes tri
GlycanIUPAC_T75 710-713 "http://rdf.glycoinfo.org/glycan/G98770PI" denotes tri
GlycanIUPAC_T76 710-713 "http://rdf.glycoinfo.org/glycan/G48944LU" denotes tri
GlycanIUPAC_T77 710-713 "http://rdf.glycoinfo.org/glycan/G68361HD" denotes tri
GlycanIUPAC_T78 710-713 "http://rdf.glycoinfo.org/glycan/G57043GW" denotes tri
GlycanIUPAC_T79 710-713 "http://rdf.glycoinfo.org/glycan/G68666JO" denotes tri
GlycanIUPAC_T80 710-713 "http://rdf.glycoinfo.org/glycan/G52284HH" denotes tri
GlycanIUPAC_T81 710-713 "http://rdf.glycoinfo.org/glycan/G48271RR" denotes tri
GlycanIUPAC_T82 710-713 "http://rdf.glycoinfo.org/glycan/G28222XB" denotes tri
GlycanIUPAC_T83 710-713 "http://rdf.glycoinfo.org/glycan/G69666WN" denotes tri
GlycanIUPAC_T84 710-713 "http://rdf.glycoinfo.org/glycan/G00846QB" denotes tri
GlycanIUPAC_T85 710-713 "http://rdf.glycoinfo.org/glycan/G34497XL" denotes tri
GlycanIUPAC_T86 710-713 "http://rdf.glycoinfo.org/glycan/G83093ZM" denotes tri
GlycanIUPAC_T87 710-713 "http://rdf.glycoinfo.org/glycan/G07756TT" denotes tri
GlycanIUPAC_T88 710-713 "http://rdf.glycoinfo.org/glycan/G26740FE" denotes tri
GlycanIUPAC_T89 710-713 "http://rdf.glycoinfo.org/glycan/G32930YQ" denotes tri
GlycanIUPAC_T90 710-713 "http://rdf.glycoinfo.org/glycan/G75215RK" denotes tri
GlycanIUPAC_T91 710-713 "http://rdf.glycoinfo.org/glycan/G98272YB" denotes tri
GlycanIUPAC_T92 710-713 "http://rdf.glycoinfo.org/glycan/G71155WF" denotes tri
GlycanIUPAC_T93 710-713 "http://rdf.glycoinfo.org/glycan/G56744IY" denotes tri
GlycanIUPAC_T94 710-713 "http://rdf.glycoinfo.org/glycan/G38394RH" denotes tri
GlycanIUPAC_T95 710-713 "http://rdf.glycoinfo.org/glycan/G11815AV" denotes tri
GlycanIUPAC_T96 710-713 "http://rdf.glycoinfo.org/glycan/G62676XB" denotes tri
GlycanIUPAC_T97 710-713 "http://rdf.glycoinfo.org/glycan/G96377XW" denotes tri
GlycanIUPAC_T98 710-713 "http://rdf.glycoinfo.org/glycan/G99347BR" denotes tri
GlycanIUPAC_T99 710-713 "http://rdf.glycoinfo.org/glycan/G70803WR" denotes tri
GlycanIUPAC_T100 710-713 "http://rdf.glycoinfo.org/glycan/G88778DU" denotes tri
GlycanIUPAC_T101 710-713 "http://rdf.glycoinfo.org/glycan/G07971EH" denotes tri
GlycanIUPAC_T102 710-713 "http://rdf.glycoinfo.org/glycan/G95272JN" denotes tri
GlycanIUPAC_T103 710-713 "http://rdf.glycoinfo.org/glycan/G55109ZG" denotes tri
GlycanIUPAC_T104 710-713 "http://rdf.glycoinfo.org/glycan/G71585SL" denotes tri
GlycanIUPAC_T105 710-713 "http://rdf.glycoinfo.org/glycan/G07197CP" denotes tri
GlycanIUPAC_T106 710-713 "http://rdf.glycoinfo.org/glycan/G17730NT" denotes tri
GlycanIUPAC_T107 710-713 "http://rdf.glycoinfo.org/glycan/G34903LH" denotes tri
GlycanIUPAC_T108 710-713 "http://rdf.glycoinfo.org/glycan/G65660GA" denotes tri
GlycanIUPAC_T109 710-713 "http://rdf.glycoinfo.org/glycan/G48172IK" denotes tri
GlycanIUPAC_T110 710-713 "http://rdf.glycoinfo.org/glycan/G20725CN" denotes tri
GlycanIUPAC_T111 710-713 "http://rdf.glycoinfo.org/glycan/G50853HE" denotes tri
GlycanIUPAC_T112 710-713 "http://rdf.glycoinfo.org/glycan/G18401GJ" denotes tri
GlycanIUPAC_T113 710-713 "http://rdf.glycoinfo.org/glycan/G89755ME" denotes tri
GlycanIUPAC_T114 710-713 "http://rdf.glycoinfo.org/glycan/G58581FW" denotes tri
GlycanIUPAC_T115 710-713 "http://rdf.glycoinfo.org/glycan/G84356OA" denotes tri
GlycanIUPAC_T116 710-713 "http://rdf.glycoinfo.org/glycan/G48553NO" denotes tri
GlycanIUPAC_T117 710-713 "http://rdf.glycoinfo.org/glycan/G86886IB" denotes tri
GlycanIUPAC_T118 710-713 "http://rdf.glycoinfo.org/glycan/G22655ST" denotes tri
GlycanIUPAC_T119 778-784 "http://rdf.glycoinfo.org/glycan/G26693XF" denotes GlcNAc
GlycanIUPAC_T120 778-784 "http://rdf.glycoinfo.org/glycan/G01864SU" denotes GlcNAc
GlycanIUPAC_T121 778-784 "http://rdf.glycoinfo.org/glycan/G17605FD" denotes GlcNAc
GlycanIUPAC_T122 778-784 "http://rdf.glycoinfo.org/glycan/G41950LU" denotes GlcNAc
GlycanIUPAC_T123 778-784 "http://rdf.glycoinfo.org/glycan/G57195RJ" denotes GlcNAc
GlycanIUPAC_T124 778-784 "http://rdf.glycoinfo.org/glycan/G85391SA" denotes GlcNAc
GlycanIUPAC_T125 778-784 "http://rdf.glycoinfo.org/glycan/G89565QL" denotes GlcNAc
GlycanIUPAC_T126 778-784 "http://rdf.glycoinfo.org/glycan/G80869MR" denotes GlcNAc
GlycanIUPAC_T127 778-784 "http://rdf.glycoinfo.org/glycan/G55978NL" denotes GlcNAc
GlycanIUPAC_T128 778-784 "http://rdf.glycoinfo.org/glycan/G54644LT" denotes GlcNAc
GlycanIUPAC_T129 778-784 "http://rdf.glycoinfo.org/glycan/G25694UG" denotes GlcNAc
GlycanIUPAC_T130 778-784 "http://rdf.glycoinfo.org/glycan/G25126RB" denotes GlcNAc
GlycanIUPAC_T131 778-784 "http://rdf.glycoinfo.org/glycan/G51848AD" denotes GlcNAc
GlycanIUPAC_T132 778-784 "http://rdf.glycoinfo.org/glycan/G94667GM" denotes GlcNAc
GlycanIUPAC_T133 778-784 "http://rdf.glycoinfo.org/glycan/G30124BO" denotes GlcNAc
GlycanIUPAC_T134 778-784 "http://rdf.glycoinfo.org/glycan/G82777EZ" denotes GlcNAc
GlycanIUPAC_T135 778-784 "http://rdf.glycoinfo.org/glycan/G10151YZ" denotes GlcNAc
GlycanIUPAC_T136 778-784 "http://rdf.glycoinfo.org/glycan/G17585ZM" denotes GlcNAc
GlycanIUPAC_T137 778-784 "http://rdf.glycoinfo.org/glycan/G04411CJ" denotes GlcNAc
GlycanIUPAC_T138 778-784 "http://rdf.glycoinfo.org/glycan/G38254HJ" denotes GlcNAc
GlycanIUPAC_T139 778-784 "http://rdf.glycoinfo.org/glycan/G75188FS" denotes GlcNAc
GlycanIUPAC_T140 778-784 "http://rdf.glycoinfo.org/glycan/G70374VG" denotes GlcNAc
GlycanIUPAC_T141 778-784 "http://rdf.glycoinfo.org/glycan/G45176LJ" denotes GlcNAc
GlycanIUPAC_T142 778-784 "http://rdf.glycoinfo.org/glycan/G30874VW" denotes GlcNAc
GlycanIUPAC_T143 778-784 "http://rdf.glycoinfo.org/glycan/G69333MI" denotes GlcNAc
GlycanIUPAC_T144 778-784 "http://rdf.glycoinfo.org/glycan/G10676XO" denotes GlcNAc
GlycanIUPAC_T145 778-784 "http://rdf.glycoinfo.org/glycan/G14843DJ" denotes GlcNAc
GlycanIUPAC_T146 778-784 "http://rdf.glycoinfo.org/glycan/G47546FR" denotes GlcNAc
GlycanIUPAC_T147 778-784 "http://rdf.glycoinfo.org/glycan/G73695ZM" denotes GlcNAc
GlycanIUPAC_T148 778-784 "http://rdf.glycoinfo.org/glycan/G31923TJ" denotes GlcNAc
GlycanIUPAC_T149 778-784 "http://rdf.glycoinfo.org/glycan/G60519EP" denotes GlcNAc
GlycanIUPAC_T150 778-784 "http://rdf.glycoinfo.org/glycan/G07933IA" denotes GlcNAc
GlycanIUPAC_T151 778-784 "http://rdf.glycoinfo.org/glycan/G40745NH" denotes GlcNAc
GlycanIUPAC_T152 778-784 "http://rdf.glycoinfo.org/glycan/G54496YV" denotes GlcNAc
GlycanIUPAC_T153 778-784 "http://rdf.glycoinfo.org/glycan/G62953SQ" denotes GlcNAc
GlycanIUPAC_T154 778-784 "http://rdf.glycoinfo.org/glycan/G70070AY" denotes GlcNAc
GlycanIUPAC_T155 778-784 "http://rdf.glycoinfo.org/glycan/G78792WC" denotes GlcNAc
GlycanIUPAC_T156 778-784 "http://rdf.glycoinfo.org/glycan/G25238AV" denotes GlcNAc
GlycanIUPAC_T157 778-784 "http://rdf.glycoinfo.org/glycan/G40510DP" denotes GlcNAc
GlycanIUPAC_T158 778-784 "http://rdf.glycoinfo.org/glycan/G61120TK" denotes GlcNAc
GlycanIUPAC_T159 778-784 "http://rdf.glycoinfo.org/glycan/G41342KV" denotes GlcNAc
GlycanIUPAC_T160 778-784 "http://rdf.glycoinfo.org/glycan/G90703NA" denotes GlcNAc
GlycanIUPAC_T161 778-784 "http://rdf.glycoinfo.org/glycan/G01591HR" denotes GlcNAc
GlycanIUPAC_T162 778-784 "http://rdf.glycoinfo.org/glycan/G56520XN" denotes GlcNAc
GlycanIUPAC_T163 778-784 "http://rdf.glycoinfo.org/glycan/G81830JX" denotes GlcNAc

performance-test

Id Subject Object Predicate Lexical cue
PD-UBERON-AE-B_T1 196-201 http://purl.obolibrary.org/obo/UBERON_0001977 denotes serum

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 331-355 Disease denotes hepatocellular carcinoma http://purl.obolibrary.org/obo/MONDO_0007256

Lectin-Jamboree-small

Id Subject Object Predicate Lexical cue glycosmos_id
T12 1409-1412 Lectin denotes AOL GL_002011
T13 1417-1420 Lectin denotes AAL GL_000407
T14 1499-1502 Lectin denotes LCA GL_001682
T1 152-155 Lectin denotes LCA GL_001682
T2 425-428 Lectin denotes LCA GL_001682
T3 474-477 Lectin denotes PSA GL_002304
T4 932-935 Lectin denotes LCA GL_001682
T5 1054-1057 Lectin denotes PSA GL_002304
T6 1191-1194 Lectin denotes LCA GL_001682
T7 1199-1202 Lectin denotes PSA GL_002304
T8 1322-1325 Lectin denotes AOL GL_002011
T9 1348-1351 Lectin denotes AAL GL_000407
T10 1354-1357 Lectin denotes LCA GL_001682
T11 1362-1365 Lectin denotes PSA GL_002304

Lectin-Jamboree-Sentence

Id Subject Object Predicate Lexical cue
T1 0-128 Sentence denotes Comparative analysis of core-fucose-binding lectins from Lens culinaris and Pisum sativum using frontal affinity chromatography.
T2 129-356 Sentence denotes Lens culinaris lectin (LCA) is a useful probe for the detection in serum of a core-fucosylated alpha-fetoprotein, called AFP-L3 fraction, which is a well-known marker for the diagnosis and prognosis of hepatocellular carcinoma.
T3 357-600 Sentence denotes Here we performed a systematic quantitative interaction analysis of LCA and its close homolog, Pisum sativum lectin (PSA), by frontal affinity chromatography with 143 pyridylaminated (PA) glycans including a series of core-fucosylated glycans.
T4 601-875 Sentence denotes Both lectins showed binding affinity to core-fucosylated, mono- and bi-antennary N-glycans, but not to their tri- and tetra-antennary forms, indicating that the addition of the GlcNAc residue at the N-acetylglucosaminyltransferase IV position abrogates the binding affinity.
T5 876-1158 Sentence denotes However, their specificities are distinguishable: while LCA showed the highest affinity to the core-fucosylated, agalactosylated, bi-antennary N-glycan (K(a)=1.1 x 10(5) M(-1)), PSA showed the highest affinity to the core-fucosylated, trimannosyl structure (K(a)=1.2 x 10(5) M(-1)).
T6 1159-1353 Sentence denotes Glycan-binding specificities of LCA and PSA were also analyzed by glycoconjugate microarray compared to other core-fucose-binding lectins from Aspergillus oryzae (AOL) and Aleuria auratia (AAL).
T7 1354-1472 Sentence denotes LCA and PSA bound specifically to core fucose, whereas AOL and AAL exhibited broad specificity to fucosylated glycans.
T8 1473-1648 Sentence denotes These results explain why LCA is appropriate as a specific probe for AFP-L3, which mainly contains a core-fucosylated, biantennary N-glycan, but not its highly branched forms.

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 57-71 OrganismTaxon denotes Lens culinaris 3864
T2 76-89 OrganismTaxon denotes Pisum sativum 3888
T3 129-143 OrganismTaxon denotes Lens culinaris 3864
T4 452-465 OrganismTaxon denotes Pisum sativum 3888
T5 1302-1320 OrganismTaxon denotes Aspergillus oryzae 5062
T6 1322-1325 OrganismTaxon denotes AOL 5062
T7 1331-1338 OrganismTaxon denotes Aleuria 5187
T8 1409-1412 OrganismTaxon denotes AOL 5062

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 57-61 Body_part denotes Lens http://purl.obolibrary.org/obo/MAT_0000141
T2 129-133 Body_part denotes Lens http://purl.obolibrary.org/obo/MAT_0000141

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 57-61 Body_part denotes Lens http://purl.obolibrary.org/obo/UBERON_0000965|http://purl.obolibrary.org/obo/UBERON_0005389
T3 96-103 Body_part denotes frontal http://purl.obolibrary.org/obo/UBERON_0000209
T4 129-133 Body_part denotes Lens http://purl.obolibrary.org/obo/UBERON_0000965|http://purl.obolibrary.org/obo/UBERON_0005389
T6 483-490 Body_part denotes frontal http://purl.obolibrary.org/obo/UBERON_0000209

HP-phenotype

Id Subject Object Predicate Lexical cue hp_id
T1 331-355 Phenotype denotes hepatocellular carcinoma HP:0001402