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PubMed:19094116 JSONTXT

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DisGeNET

Id Subject Object Predicate Lexical cue
T0 27-75 gene:1437 denotes granulocyte-macrophage colony-stimulating factor
T1 101-106 disease:C0010346 denotes Crohn
T2 486-490 gene:64127 denotes NOD2
T3 549-554 disease:C0010346 denotes Crohn
R1 T0 T1 associated_with granulocyte-macrophage colony-stimulating factor,Crohn
R2 T2 T3 associated_with NOD2,Crohn

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
19094116-0#27#75#gene1437 27-75 gene1437 denotes granulocyte-macrophage colony-stimulating factor
19094116-0#101#116#diseaseC0010346 101-116 diseaseC0010346 denotes Crohn's disease
19094116-12#67#71#gene64127 1857-1861 gene64127 denotes NOD2
19094116-12#189#193#gene64127 1979-1983 gene64127 denotes NOD2
19094116-12#95#97#diseaseC0010346 1885-1887 diseaseC0010346 denotes CD
27#75#gene1437101#116#diseaseC0010346 19094116-0#27#75#gene1437 19094116-0#101#116#diseaseC0010346 associated_with granulocyte-macrophage colony-stimulating factor,Crohn's disease
67#71#gene6412795#97#diseaseC0010346 19094116-12#67#71#gene64127 19094116-12#95#97#diseaseC0010346 associated_with NOD2,CD
189#193#gene6412795#97#diseaseC0010346 19094116-12#189#193#gene64127 19094116-12#95#97#diseaseC0010346 associated_with NOD2,CD

sonoma2

Id Subject Object Predicate Lexical cue
T0 0-75 GENE denotes Toll-like receptor-induced granulocyte-macrophage colony-stimulating factor
T1 27-75 GENE denotes granulocyte-macrophage colony-stimulating factor
T2 76-85 MPA denotes secretion
T3 89-97 NEGREG denotes impaired
T4 101-116 DISEASE denotes Crohn's disease
T5 120-165 GENE denotes nucleotide oligomerization domain 2-dependent
T6 283-289 REG denotes govern
T7 353-366 VAR denotes polymorphisms
T8 368-372 VAR denotes SNPs
T9 486-490 GENE denotes NOD2
T10 492-527 GENE denotes nucleotide oligomerization domain 2
T11 533-543 REG denotes associated
T12 549-564 DISEASE denotes Crohn's disease
T13 566-568 DISEASE denotes CD
T14 591-597 REG denotes impact
T15 601-605 GENE denotes NOD2
T16 606-619 VAR denotes polymorphisms
T17 623-641 MPA denotes cytokine secretion
T18 646-659 CPA denotes proliferation
T19 699-704 CPA denotes PBMCs
T20 709-717 REG denotes response
T21 741-744 GENE denotes TLR
T22 750-754 GENE denotes NOD2
T23 750-754 GENE denotes NOD2
T24 755-762 MPA denotes ligands
T25 773-777 GENE denotes NOD2
T26 778-781 VAR denotes SNP
T27 795-797 DISEASE denotes CD
T28 856-866 REG denotes stimulated
T29 872-876 GENE denotes NOD2
T30 872-876 GENE denotes NOD2
T31 881-884 GENE denotes TLR
T32 971-979 MPA denotes presence
T33 999-1047 GENE denotes granulocyte-macrophage colony-stimulating factor
T34 999-1047 GENE denotes granulocyte-macrophage colony-stimulating factor
T35 1049-1055 GENE denotes GM-CSF
T36 1049-1055 GENE denotes GM-CSF
T37 1058-1081 GENE denotes interleukin (IL)-1 beta
T38 1058-1081 GENE denotes interleukin (IL)-1 beta
T39 1086-1120 GENE denotes tumour necrosis factor (TNF)-alpha
T40 1086-1120 GENE denotes tumour necrosis factor (TNF)-alpha
T41 1125-1127 DISEASE denotes CD
T42 1150-1156 GENE denotes GM-CSF
T43 1150-1156 GENE denotes GM-CSF
T44 1157-1166 MPA denotes secretion
T45 1171-1179 NEGREG denotes impaired
T46 1188-1202 GENE denotes NOD2-dependent
T47 1188-1202 GENE denotes NOD2-dependent
T48 1207-1230 MPA denotes -independent mechanisms
T49 1242-1251 GENE denotes TNF-alpha
T50 1242-1251 GENE denotes TNF-alpha
T51 1252-1262 MPA denotes production
T52 1267-1274 POSREG denotes induced
T53 1280-1285 GENE denotes TLR-2
T54 1280-1285 GENE denotes TLR-2
T55 1286-1292 MPA denotes ligand
T56 1300-1315 NEGREG denotes down-regulatory
T57 1316-1324 MPA denotes function
T58 1332-1336 GENE denotes NOD2
T59 1332-1336 GENE denotes NOD2
T60 1337-1343 MPA denotes ligand
T61 1345-1362 MPA denotes muramyl dipeptide
T62 1368-1376 NEGREG denotes impaired
T63 1394-1396 DISEASE denotes CD
T64 1407-1432 MPA denotes Intracellular TLR ligands
T65 1437-1444 NEGREG denotes minimal
T66 1445-1451 REG denotes effect
T67 1455-1461 GENE denotes GM-CSF
T68 1455-1461 GENE denotes GM-CSF
T69 1463-1472 GENE denotes TNF-alpha
T70 1463-1472 GENE denotes TNF-alpha
T71 1477-1485 GENE denotes IL-1beta
T72 1477-1485 GENE denotes IL-1beta
T73 1486-1495 MPA denotes secretion
T74 1497-1499 DISEASE denotes CD
T75 1514-1518 GENE denotes NOD2
T76 1519-1528 VAR denotes mutations
T77 1534-1538 REG denotes able
T78 1542-1549 MPA denotes secrete
T79 1550-1559 GENE denotes TNF-alpha
T80 1550-1559 GENE denotes TNF-alpha
T81 1569-1575 GENE denotes GM-CSF
T82 1569-1575 GENE denotes GM-CSF
T83 1599-1603 GENE denotes NOD2
T84 1599-1603 GENE denotes NOD2
T85 1608-1613 GENE denotes TLR-7
T86 1608-1613 GENE denotes TLR-7
T87 1614-1621 MPA denotes ligands
T88 1623-1625 DISEASE denotes CD
T89 1640-1648 NEGREG denotes impaired
T90 1649-1655 GENE denotes GM-CSF
T91 1649-1655 GENE denotes GM-CSF
T92 1656-1665 MPA denotes secretion
T93 1670-1684 GENE denotes NOD2-dependent
T94 1670-1684 GENE denotes NOD2-dependent
T95 1715-1722 REG denotes display
T96 1726-1734 NEGREG denotes impaired
T97 1735-1749 GENE denotes NOD2-dependent
T98 1735-1749 GENE denotes NOD2-dependent
T99 1750-1765 NEGREG denotes down-regulation
T100 1769-1778 GENE denotes TNF-alpha
T101 1779-1788 MPA denotes secretion
T102 1794-1800 NEGREG denotes defect
T103 1804-1810 GENE denotes GM-CSF
T104 1804-1810 GENE denotes GM-CSF
T105 1811-1820 MPA denotes secretion
T106 1821-1829 REG denotes suggests
T107 1849-1853 REG denotes role
T108 1857-1861 GENE denotes NOD2
T109 1869-1881 CPA denotes pathogenesis
T110 1885-1887 DISEASE denotes CD
T111 1931-1939 NEGREG denotes impaired
T112 1940-1946 GENE denotes GM-CSF
T113 1940-1946 GENE denotes GM-CSF
T114 1947-1956 MPA denotes secretion
T115 1965-1976 REG denotes constitutes
T116 1979-1993 GENE denotes NOD2-dependent
T117 1994-2013 MPA denotes disease risk factor
R144 T108 T109 ThemeOf NOD2,pathogenesis
R145 T109 T106 ThemeOf pathogenesis,suggests
R146 T110 T109 ThemeOf CD,pathogenesis
R147 T110 T106 ThemeOf CD,suggests
R148 T110 T107 ThemeOf CD,role
R149 T114 T111 ThemeOf secretion,impaired
R150 T112 T111 ThemeOf GM-CSF,impaired
R151 T112 T114 ThemeOf GM-CSF,secretion
R152 T112 T115 ThemeOf GM-CSF,constitutes
R153 T114 T115 ThemeOf secretion,constitutes
R154 T114 T117 ThemeOf secretion,disease risk factor
R155 T117 T115 ThemeOf disease risk factor,constitutes
R0 T0 T2 ThemeOf Toll-like receptor-induced granulocyte-macrophage colony-stimulating factor,secretion
R1 T0 T3 ThemeOf Toll-like receptor-induced granulocyte-macrophage colony-stimulating factor,impaired
R2 T2 T3 ThemeOf secretion,impaired
R3 T4 T2 ThemeOf Crohn's disease,secretion
R4 T4 T3 ThemeOf Crohn's disease,impaired
R5 T7 T11 CauseOf polymorphisms,associated
R6 T8 T11 CauseOf SNPs,associated
R7 T12 T8 ThemeOf Crohn's disease,SNPs
R8 T9 T7 ThemeOf NOD2,polymorphisms
R9 T9 T8 ThemeOf NOD2,SNPs
R10 T9 T11 ThemeOf NOD2,associated
R11 T10 T7 ThemeOf nucleotide oligomerization domain 2,polymorphisms
R12 T10 T8 ThemeOf nucleotide oligomerization domain 2,SNPs
R13 T10 T11 ThemeOf nucleotide oligomerization domain 2,associated
R14 T12 T11 ThemeOf Crohn's disease,associated
R15 T13 T11 ThemeOf CD,associated
R16 T15 T14 ThemeOf NOD2,impact
R17 T14 T16 ThemeOf impact,polymorphisms
R18 T17 T14 ThemeOf cytokine secretion,impact
R19 T15 T16 ThemeOf NOD2,polymorphisms
R20 T15 T17 ThemeOf NOD2,cytokine secretion
R21 T15 T24 ThemeOf NOD2,ligands
R22 T17 T16 ThemeOf cytokine secretion,polymorphisms
R23 T18 T16 ThemeOf proliferation,polymorphisms
R24 T17 T20 ThemeOf cytokine secretion,response
R25 T17 T24 ThemeOf cytokine secretion,ligands
R26 T18 T14 ThemeOf proliferation,impact
R27 T18 T20 ThemeOf proliferation,response
R28 T18 T24 ThemeOf proliferation,ligands
R29 T19 T14 ThemeOf PBMCs,impact
R30 T19 T20 ThemeOf PBMCs,response
R31 T19 T24 ThemeOf PBMCs,ligands
R32 T20 T24 ThemeOf response,ligands
R33 T21 T20 ThemeOf TLR,response
R34 T21 T24 ThemeOf TLR,ligands
R35 T22 T16 ThemeOf NOD2,polymorphisms
R36 T22 T20 ThemeOf NOD2,response
R37 T22 T24 ThemeOf NOD2,ligands
R38 T25 T24 ThemeOf NOD2,ligands
R39 T25 T26 ThemeOf NOD2,SNP
R40 T27 T26 ThemeOf CD,SNP
R41 T29 T28 ThemeOf NOD2,stimulated
R42 T29 T32 ThemeOf NOD2,presence
R43 T31 T28 ThemeOf TLR,stimulated
R44 T32 T28 ThemeOf presence,stimulated
R45 T33 T32 ThemeOf granulocyte-macrophage colony-stimulating factor,presence
R46 T33 T28 ThemeOf granulocyte-macrophage colony-stimulating factor,stimulated
R47 T35 T28 ThemeOf GM-CSF,stimulated
R48 T35 T32 ThemeOf GM-CSF,presence
R49 T37 T28 ThemeOf interleukin (IL)-1 beta,stimulated
R50 T37 T32 ThemeOf interleukin (IL)-1 beta,presence
R51 T39 T28 ThemeOf tumour necrosis factor (TNF)-alpha,stimulated
R52 T39 T32 ThemeOf tumour necrosis factor (TNF)-alpha,presence
R53 T41 T44 ThemeOf CD,secretion
R54 T41 T45 ThemeOf CD,impaired
R55 T42 T44 ThemeOf GM-CSF,secretion
R56 T42 T45 ThemeOf GM-CSF,impaired
R57 T44 T45 ThemeOf secretion,impaired
R58 T44 T48 ThemeOf secretion,-independent mechanisms
R59 T48 T45 ThemeOf -independent mechanisms,impaired
R60 T46 T48 ThemeOf NOD2-dependent,-independent mechanisms
R61 T49 T51 ThemeOf TNF-alpha,production
R62 T49 T52 ThemeOf TNF-alpha,induced
R63 T49 T55 ThemeOf TNF-alpha,ligand
R64 T51 T52 ThemeOf production,induced
R65 T51 T55 ThemeOf production,ligand
R66 T55 T52 CauseOf ligand,induced
R67 T53 T55 ThemeOf TLR-2,ligand
R68 T57 T56 ThemeOf function,down-regulatory
R69 T56 T60 ThemeOf down-regulatory,ligand
R70 T58 T57 ThemeOf NOD2,function
R71 T57 T60 ThemeOf function,ligand
R72 T57 T62 ThemeOf function,impaired
R73 T58 T56 ThemeOf NOD2,down-regulatory
R74 T58 T60 ThemeOf NOD2,ligand
R75 T60 T52 CauseOf ligand,induced
R76 T60 T62 CauseOf ligand,impaired
R77 T61 T57 ThemeOf muramyl dipeptide,function
R78 T61 T60 ThemeOf muramyl dipeptide,ligand
R79 T63 T62 ThemeOf CD,impaired
R80 T66 T65 ThemeOf effect,minimal
R81 T73 T66 ThemeOf secretion,effect
R82 T67 T64 ThemeOf GM-CSF,Intracellular TLR ligands
R83 T67 T65 ThemeOf GM-CSF,minimal
R84 T67 T66 ThemeOf GM-CSF,effect
R85 T67 T73 ThemeOf GM-CSF,secretion
R86 T69 T64 ThemeOf TNF-alpha,Intracellular TLR ligands
R87 T69 T65 ThemeOf TNF-alpha,minimal
R88 T69 T66 ThemeOf TNF-alpha,effect
R89 T69 T73 ThemeOf TNF-alpha,secretion
R90 T71 T64 ThemeOf IL-1beta,Intracellular TLR ligands
R91 T71 T65 ThemeOf IL-1beta,minimal
R92 T71 T66 ThemeOf IL-1beta,effect
R93 T71 T73 ThemeOf IL-1beta,secretion
R94 T73 T65 ThemeOf secretion,minimal
R95 T74 T76 ThemeOf CD,mutations
R96 T74 T77 ThemeOf CD,able
R97 T74 T78 ThemeOf CD,secrete
R98 T75 T76 ThemeOf NOD2,mutations
R99 T75 T77 ThemeOf NOD2,able
R100 T75 T78 ThemeOf NOD2,secrete
R101 T75 T87 ThemeOf NOD2,ligands
R102 T76 T77 CauseOf mutations,able
R103 T76 T78 CauseOf mutations,secrete
R104 T78 T77 ThemeOf secrete,able
R105 T79 T76 ThemeOf TNF-alpha,mutations
R106 T79 T77 ThemeOf TNF-alpha,able
R107 T79 T78 ThemeOf TNF-alpha,secrete
R108 T79 T87 ThemeOf TNF-alpha,ligands
R109 T81 T77 ThemeOf GM-CSF,able
R110 T81 T78 ThemeOf GM-CSF,secrete
R111 T81 T87 ThemeOf GM-CSF,ligands
R112 T83 T78 ThemeOf NOD2,secrete
R113 T83 T87 ThemeOf NOD2,ligands
R114 T85 T78 ThemeOf TLR-7,secrete
R115 T85 T87 ThemeOf TLR-7,ligands
R116 T88 T89 ThemeOf CD,impaired
R117 T92 T89 ThemeOf secretion,impaired
R118 T96 T89 CauseOf impaired,impaired
R119 T90 T89 ThemeOf GM-CSF,impaired
R120 T90 T92 ThemeOf GM-CSF,secretion
R121 T92 T95 ThemeOf secretion,display
R122 T92 T96 ThemeOf secretion,impaired
R123 T96 T95 ThemeOf impaired,display
R124 T99 T96 ThemeOf down-regulation,impaired
R125 T99 T97 ThemeOf down-regulation,NOD2-dependent
R126 T99 T95 ThemeOf down-regulation,display
R127 T101 T99 ThemeOf secretion,down-regulation
R128 T101 T95 ThemeOf secretion,display
R129 T101 T96 ThemeOf secretion,impaired
R130 T105 T102 ThemeOf secretion,defect
R131 T102 T109 CauseOf defect,pathogenesis
R132 T102 T111 CauseOf defect,impaired
R133 T103 T102 ThemeOf GM-CSF,defect
R134 T103 T105 ThemeOf GM-CSF,secretion
R135 T103 T106 ThemeOf GM-CSF,suggests
R136 T103 T107 ThemeOf GM-CSF,role
R137 T105 T106 ThemeOf secretion,suggests
R138 T105 T107 ThemeOf secretion,role
R139 T107 T106 ThemeOf role,suggests
R140 T108 T107 ThemeOf NOD2,role
R141 T109 T107 ThemeOf pathogenesis,role
R142 T108 T105 ThemeOf NOD2,secretion
R143 T108 T106 ThemeOf NOD2,suggests

PMID_GLOBAL

Id Subject Object Predicate Lexical cue mondo_id
T1 101-116 DiseaseOrPhenotypicFeature denotes Crohn's disease 0005011
T2 549-564 DiseaseOrPhenotypicFeature denotes Crohn's disease 0005011
T3 566-568 DiseaseOrPhenotypicFeature denotes CD 0016063|0005011
T5 795-797 DiseaseOrPhenotypicFeature denotes CD 0016063|0005011
T7 1125-1127 DiseaseOrPhenotypicFeature denotes CD 0016063|0005011
T9 1394-1396 DiseaseOrPhenotypicFeature denotes CD 0016063|0005011
T11 1497-1499 DiseaseOrPhenotypicFeature denotes CD 0016063|0005011
T13 1623-1625 DiseaseOrPhenotypicFeature denotes CD 0016063|0005011
T15 1794-1800 DiseaseOrPhenotypicFeature denotes defect 0008568
T16 1885-1887 DiseaseOrPhenotypicFeature denotes CD 0016063|0005011