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PubMed:19048115 / 758-1085 JSONTXT

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LitCoin-sentences

Id Subject Object Predicate Lexical cue
T6 0-327 Sentence denotes Markedly reduced or absent expression of Nf1 protein was observed in 6 of the 18 cell lines, and using the protein truncation test and sequencing of cDNA and genomic DNA, NF1 mutations resulting in deletion of exons and/or aberrant splicing of NF1 transcripts were detected in 5 of the 6 cell lines with loss of NF1 expression.

LitCoin-entities

Id Subject Object Predicate Lexical cue db_id
5571 41-44 GeneOrGeneProduct denotes Nf1 NCBIGene:4763
5572 171-174 GeneOrGeneProduct denotes NF1 NCBIGene:4763
5573 244-247 GeneOrGeneProduct denotes NF1 NCBIGene:4763
5574 312-315 GeneOrGeneProduct denotes NF1 NCBIGene:4763

LitCoin-SeqVar

Id Subject Object Predicate Lexical cue
T1 198-215 SequenceVariant denotes deletion of exons

LitCoin-GeneOrGeneProduct-v0

Id Subject Object Predicate Lexical cue
T27 0-8 GeneOrGeneProduct denotes Markedly
T28 9-16 GeneOrGeneProduct denotes reduced
T29 45-52 GeneOrGeneProduct denotes protein
T30 66-70 GeneOrGeneProduct denotes in 6
T31 81-85 GeneOrGeneProduct denotes cell
T32 86-91 GeneOrGeneProduct denotes lines
T33 107-114 GeneOrGeneProduct denotes protein
T34 115-125 GeneOrGeneProduct denotes truncation
T35 126-130 GeneOrGeneProduct denotes test
T36 149-153 GeneOrGeneProduct denotes cDNA
T37 171-174 GeneOrGeneProduct denotes NF1
T38 175-184 GeneOrGeneProduct denotes mutations
T39 232-240 GeneOrGeneProduct denotes splicing
T40 244-247 GeneOrGeneProduct denotes NF1
T41 248-259 GeneOrGeneProduct denotes transcripts
T42 274-278 GeneOrGeneProduct denotes in 5
T43 288-292 GeneOrGeneProduct denotes cell
T44 293-298 GeneOrGeneProduct denotes lines
T45 312-315 GeneOrGeneProduct denotes NF1

LitCoin-GeneOrGeneProduct-v2

Id Subject Object Predicate Lexical cue
T17 9-16 GeneOrGeneProduct denotes reduced
T18 45-52 GeneOrGeneProduct denotes protein
T19 81-85 GeneOrGeneProduct denotes cell
T20 86-91 GeneOrGeneProduct denotes lines
T21 107-114 GeneOrGeneProduct denotes protein
T22 149-153 GeneOrGeneProduct denotes cDNA
T23 171-174 GeneOrGeneProduct denotes NF1
T24 244-247 GeneOrGeneProduct denotes NF1
T25 288-292 GeneOrGeneProduct denotes cell
T26 293-298 GeneOrGeneProduct denotes lines
T27 312-315 GeneOrGeneProduct denotes NF1

LitCoin-GeneOrGeneProduct-v3

Id Subject Object Predicate Lexical cue
T11 41-52 GeneOrGeneProduct denotes Nf1 protein
T12 171-174 GeneOrGeneProduct denotes NF1
T13 244-247 GeneOrGeneProduct denotes NF1
T14 312-315 GeneOrGeneProduct denotes NF1

LitCoin_Mondo_095

Id Subject Object Predicate Lexical cue mondo_id
T11 171-174 DiseaseOrPhenotypicFeature denotes NF1 0018975
T12 244-247 DiseaseOrPhenotypicFeature denotes NF1 0018975
T13 312-315 DiseaseOrPhenotypicFeature denotes NF1 0018975

LitCoin-training-merged

Id Subject Object Predicate Lexical cue
T14 312-315 GeneOrGeneProduct denotes NF1
T13 244-247 GeneOrGeneProduct denotes NF1
T12 171-174 GeneOrGeneProduct denotes NF1
T11 41-52 GeneOrGeneProduct denotes Nf1 protein
T76840 198-215 SequenceVariant denotes deletion of exons

PMID_GLOBAL

Id Subject Object Predicate Lexical cue mondo_id
T11 171-174 DiseaseOrPhenotypicFeature denotes NF1 0018975
T12 244-247 DiseaseOrPhenotypicFeature denotes NF1 0018975
T13 312-315 DiseaseOrPhenotypicFeature denotes NF1 0018975