PubMed:18991055
Annnotations
TEST-DiseaseOrPhenotypicFeature
| Id | Subject | Object | Predicate | Lexical cue | #label |
|---|---|---|---|---|---|
| T1 | 100-115 | DiseaseOrPhenotypicFeature | denotes | type 2 diabetes | D003924 |
| T2 | 281-305 | DiseaseOrPhenotypicFeature | denotes | type 2 diabetes mellitus | D003924 |
| T3 | 307-311 | DiseaseOrPhenotypicFeature | denotes | T2DM | DISEASE |
| T4 | 483-487 | DiseaseOrPhenotypicFeature | denotes | T2DM | DISEASE |
| T5 | 600-604 | DiseaseOrPhenotypicFeature | denotes | T2DM | DISEASE |
| T6 | 617-625 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE |
| T7 | 762-774 | DiseaseOrPhenotypicFeature | denotes | weight, body | D001835 |
| T8 | 1273-1277 | DiseaseOrPhenotypicFeature | denotes | T2DM | DISEASE |
| T9 | 1390-1394 | DiseaseOrPhenotypicFeature | denotes | T2DM | DISEASE |
| T10 | 1556-1560 | DiseaseOrPhenotypicFeature | denotes | T2DM | DISEASE |
TEST-ChemicalEntity
| Id | Subject | Object | Predicate | Lexical cue | ID: |
|---|---|---|---|---|---|
| T1 | 805-812 | ChemicalEntity | denotes | glucose | http://purl.obolibrary.org/obo/CHEBI_4167|http://purl.obolibrary.org/obo/CHEBI_17234|D005947 |
TEST-OrganismTaxon
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 586-594 | OrganismTaxon | denotes | patients |
| T2 | 820-828 | OrganismTaxon | denotes | patients |
Test-SequenceVariant
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 649-659 | SequenceVariant | denotes | rs13266634 |
| T2 | 661-670 | SequenceVariant | denotes | rs1111875 |
| T3 | 672-682 | SequenceVariant | denotes | rs10811661 |
| T4 | 684-693 | SequenceVariant | denotes | rs4402960 |
| T5 | 695-704 | SequenceVariant | denotes | rs8050136 |
| T6 | 706-714 | SequenceVariant | denotes | rs734312 |
| T7 | 716-725 | SequenceVariant | denotes | rs7754840 |
| T8 | 730-739 | SequenceVariant | denotes | rs2237892 |
| T9 | 903-912 | SequenceVariant | denotes | rs7754840 |
| T10 | 994-1003 | SequenceVariant | denotes | rs1111875 |
| T11 | 1080-1090 | SequenceVariant | denotes | rs10811661 |
| T12 | 1174-1183 | SequenceVariant | denotes | rs2237892 |
Test-GeneOrGeneProduct
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 37-44 | GeneOrGeneProduct | denotes | SLC30A8 |
| T2 | 46-50 | GeneOrGeneProduct | denotes | HHEX |
| T3 | 52-60 | GeneOrGeneProduct | denotes | CDKN2A/B |
| T4 | 62-69 | GeneOrGeneProduct | denotes | IGF2BP2 |
| T5 | 76-80 | GeneOrGeneProduct | denotes | WFS1 |
| T6 | 82-88 | GeneOrGeneProduct | denotes | CDKAL1 |
| T7 | 90-95 | GeneOrGeneProduct | denotes | KCNQ1 |
| T8 | 405-412 | GeneOrGeneProduct | denotes | SLC30A8 |
| T9 | 414-418 | GeneOrGeneProduct | denotes | HHEX |
| T10 | 420-428 | GeneOrGeneProduct | denotes | CDKN2A/B |
| T11 | 430-437 | GeneOrGeneProduct | denotes | IGF2BP2 |
| T12 | 444-448 | GeneOrGeneProduct | denotes | WFS1 |
| T13 | 450-456 | GeneOrGeneProduct | denotes | CDKAL1 |
| T14 | 461-466 | GeneOrGeneProduct | denotes | KCNQ1 |
| T15 | 895-901 | GeneOrGeneProduct | denotes | CDKAL1 |
| T16 | 1057-1061 | GeneOrGeneProduct | denotes | HHEX |
| T17 | 1144-1152 | GeneOrGeneProduct | denotes | CDKN2A/B |
| T18 | 1230-1235 | GeneOrGeneProduct | denotes | KCNQ1 |
| T19 | 1336-1343 | GeneOrGeneProduct | denotes | SLC30A8 |
| T20 | 1412-1419 | GeneOrGeneProduct | denotes | IGF2BP2 |
| T21 | 1429-1433 | GeneOrGeneProduct | denotes | WFS1 |
| T22 | 1497-1501 | GeneOrGeneProduct | denotes | HHEX |
| T23 | 1503-1511 | GeneOrGeneProduct | denotes | CDKN2A/B |
| T24 | 1513-1519 | GeneOrGeneProduct | denotes | CDKAL1 |
| T25 | 1521-1526 | GeneOrGeneProduct | denotes | KCNQ1 |
| T26 | 1531-1538 | GeneOrGeneProduct | denotes | SLC30A8 |
Test-merged-2
| Id | Subject | Object | Predicate | Lexical cue | #label | ID: |
|---|---|---|---|---|---|---|
| T84767 | 649-659 | SequenceVariant | denotes | rs13266634 | ||
| T15762 | 661-670 | SequenceVariant | denotes | rs1111875 | ||
| T83837 | 672-682 | SequenceVariant | denotes | rs10811661 | ||
| T53650 | 684-693 | SequenceVariant | denotes | rs4402960 | ||
| T69438 | 695-704 | SequenceVariant | denotes | rs8050136 | ||
| T31592 | 706-714 | SequenceVariant | denotes | rs734312 | ||
| T84220 | 716-725 | SequenceVariant | denotes | rs7754840 | ||
| T66558 | 730-739 | SequenceVariant | denotes | rs2237892 | ||
| T80002 | 903-912 | SequenceVariant | denotes | rs7754840 | ||
| T31936 | 994-1003 | SequenceVariant | denotes | rs1111875 | ||
| T83360 | 1080-1090 | SequenceVariant | denotes | rs10811661 | ||
| T50679 | 1174-1183 | SequenceVariant | denotes | rs2237892 | ||
| T643 | 805-812 | ChemicalEntity | denotes | glucose | D005947|http://purl.obolibrary.org/obo/CHEBI_4167|http://purl.obolibrary.org/obo/CHEBI_17234 | |
| T32667 | 37-44 | GeneOrGeneProduct | denotes | SLC30A8 | ||
| T62909 | 46-50 | GeneOrGeneProduct | denotes | HHEX | ||
| T59727 | 52-60 | GeneOrGeneProduct | denotes | CDKN2A/B | ||
| T82545 | 62-69 | GeneOrGeneProduct | denotes | IGF2BP2 | ||
| T46863 | 76-80 | GeneOrGeneProduct | denotes | WFS1 | ||
| T98646 | 82-88 | GeneOrGeneProduct | denotes | CDKAL1 | ||
| T31153 | 90-95 | GeneOrGeneProduct | denotes | KCNQ1 | ||
| T46484 | 405-412 | GeneOrGeneProduct | denotes | SLC30A8 | ||
| T16083 | 414-418 | GeneOrGeneProduct | denotes | HHEX | ||
| T3585 | 420-428 | GeneOrGeneProduct | denotes | CDKN2A/B | ||
| T11 | 430-437 | GeneOrGeneProduct | denotes | IGF2BP2 | ||
| T12 | 444-448 | GeneOrGeneProduct | denotes | WFS1 | ||
| T13 | 450-456 | GeneOrGeneProduct | denotes | CDKAL1 | ||
| T14 | 461-466 | GeneOrGeneProduct | denotes | KCNQ1 | ||
| T15 | 895-901 | GeneOrGeneProduct | denotes | CDKAL1 | ||
| T16 | 1057-1061 | GeneOrGeneProduct | denotes | HHEX | ||
| T17 | 1144-1152 | GeneOrGeneProduct | denotes | CDKN2A/B | ||
| T18 | 1230-1235 | GeneOrGeneProduct | denotes | KCNQ1 | ||
| T19 | 1336-1343 | GeneOrGeneProduct | denotes | SLC30A8 | ||
| T20 | 1412-1419 | GeneOrGeneProduct | denotes | IGF2BP2 | ||
| T21 | 1429-1433 | GeneOrGeneProduct | denotes | WFS1 | ||
| T22 | 1497-1501 | GeneOrGeneProduct | denotes | HHEX | ||
| T23 | 1503-1511 | GeneOrGeneProduct | denotes | CDKN2A/B | ||
| T24 | 1513-1519 | GeneOrGeneProduct | denotes | CDKAL1 | ||
| T25 | 1521-1526 | GeneOrGeneProduct | denotes | KCNQ1 | ||
| T26 | 1531-1538 | GeneOrGeneProduct | denotes | SLC30A8 | ||
| T16008 | 586-594 | OrganismTaxon | denotes | patients | ||
| T1074 | 820-828 | OrganismTaxon | denotes | patients | ||
| T1 | 100-115 | DiseaseOrPhenotypicFeature | denotes | type 2 diabetes | D003924 | |
| T2 | 281-305 | DiseaseOrPhenotypicFeature | denotes | type 2 diabetes mellitus | D003924 | |
| T3 | 307-311 | DiseaseOrPhenotypicFeature | denotes | T2DM | DISEASE | |
| T4 | 483-487 | DiseaseOrPhenotypicFeature | denotes | T2DM | DISEASE | |
| T5 | 600-604 | DiseaseOrPhenotypicFeature | denotes | T2DM | DISEASE | |
| T6 | 617-625 | DiseaseOrPhenotypicFeature | denotes | diabetic | DISEASE | |
| T7 | 762-774 | DiseaseOrPhenotypicFeature | denotes | weight, body | D001835 | |
| T8 | 1273-1277 | DiseaseOrPhenotypicFeature | denotes | T2DM | DISEASE | |
| T9 | 1390-1394 | DiseaseOrPhenotypicFeature | denotes | T2DM | DISEASE | |
| T10 | 1556-1560 | DiseaseOrPhenotypicFeature | denotes | T2DM | DISEASE |
DisGeNET
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T0 | 1497-1501 | gene:3087 | denotes | HHEX |
| T1 | 1556-1560 | disease:C0011860 | denotes | T2DM |
| T2 | 1513-1519 | gene:54901 | denotes | CDKAL1 |
| T3 | 1556-1560 | disease:C0011860 | denotes | T2DM |
| T4 | 1521-1526 | gene:3784 | denotes | KCNQ1 |
| T5 | 1556-1560 | disease:C0011860 | denotes | T2DM |
| T6 | 1531-1538 | gene:169026 | denotes | SLC30A8 |
| T7 | 1556-1560 | disease:C0011860 | denotes | T2DM |
| R1 | T0 | T1 | associated_with | HHEX,T2DM |
| R2 | T2 | T3 | associated_with | CDKAL1,T2DM |
| R3 | T4 | T5 | associated_with | KCNQ1,T2DM |
| R4 | T6 | T7 | associated_with | SLC30A8,T2DM |
DisGeNET5_variant_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 18991055-6#196#205#geners2237892 | 1174-1183 | geners2237892 | denotes | rs2237892 |
| 18991055-6#16#25#geners1111875 | 994-1003 | geners1111875 | denotes | rs1111875 |
| 18991055-6#102#112#geners10811661 | 1080-1090 | geners10811661 | denotes | rs10811661 |
| 18991055-6#295#299#diseaseC0011860 | 1273-1277 | diseaseC0011860 | denotes | T2DM |
| 196#205#geners2237892295#299#diseaseC0011860 | 18991055-6#196#205#geners2237892 | 18991055-6#295#299#diseaseC0011860 | associated_with | rs2237892,T2DM |
| 16#25#geners1111875295#299#diseaseC0011860 | 18991055-6#16#25#geners1111875 | 18991055-6#295#299#diseaseC0011860 | associated_with | rs1111875,T2DM |
| 102#112#geners10811661295#299#diseaseC0011860 | 18991055-6#102#112#geners10811661 | 18991055-6#295#299#diseaseC0011860 | associated_with | rs10811661,T2DM |
DisGeNET5_gene_disease
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| 18991055-0#46#50#gene3087 | 46-50 | gene3087 | denotes | HHEX |
| 18991055-0#90#95#gene3784 | 90-95 | gene3784 | denotes | KCNQ1 |
| 18991055-0#100#115#diseaseC0011860 | 100-115 | diseaseC0011860 | denotes | type 2 diabetes |
| 18991055-8#58#64#gene54901 | 1513-1519 | gene54901 | denotes | CDKAL1 |
| 18991055-8#76#83#gene169026 | 1531-1538 | gene169026 | denotes | SLC30A8 |
| 18991055-8#101#105#diseaseC0011860 | 1556-1560 | diseaseC0011860 | denotes | T2DM |
| 46#50#gene3087100#115#diseaseC0011860 | 18991055-0#46#50#gene3087 | 18991055-0#100#115#diseaseC0011860 | associated_with | HHEX,type 2 diabetes |
| 90#95#gene3784100#115#diseaseC0011860 | 18991055-0#90#95#gene3784 | 18991055-0#100#115#diseaseC0011860 | associated_with | KCNQ1,type 2 diabetes |
| 58#64#gene54901101#105#diseaseC0011860 | 18991055-8#58#64#gene54901 | 18991055-8#101#105#diseaseC0011860 | associated_with | CDKAL1,T2DM |
| 76#83#gene169026101#105#diseaseC0011860 | 18991055-8#76#83#gene169026 | 18991055-8#101#105#diseaseC0011860 | associated_with | SLC30A8,T2DM |
PubTator4TogoVar
| Id | Subject | Object | Predicate | Lexical cue | resolved_to |
|---|---|---|---|---|---|
| 77 | 649-659 | SNP | denotes | rs13266634 | tmVar:rs13266634;VariantGroup:0;CorrespondingGene:169026;RS#:13266634;CorrespondingSpecies:9606 |
| 78 | 661-670 | SNP | denotes | rs1111875 | tmVar:rs1111875;VariantGroup:6;RS#:1111875 |
| 79 | 672-682 | SNP | denotes | rs10811661 | tmVar:rs10811661;VariantGroup:1;RS#:10811661 |
| 80 | 684-693 | SNP | denotes | rs4402960 | tmVar:rs4402960;VariantGroup:5;CorrespondingGene:10644;RS#:4402960;CorrespondingSpecies:9606 |
| 81 | 695-704 | SNP | denotes | rs8050136 | tmVar:rs8050136;VariantGroup:3;CorrespondingGene:79068;RS#:8050136;CorrespondingSpecies:9606 |
| 82 | 706-714 | SNP | denotes | rs734312 | tmVar:rs734312;VariantGroup:2;CorrespondingGene:7466;RS#:734312;CorrespondingSpecies:9606 |
| 83 | 716-725 | SNP | denotes | rs7754840 | tmVar:rs7754840;VariantGroup:4;CorrespondingGene:54901;RS#:7754840;CorrespondingSpecies:9606 |
| 84 | 730-739 | SNP | denotes | rs2237892 | tmVar:rs2237892;VariantGroup:7;CorrespondingGene:3784;RS#:2237892;CorrespondingSpecies:9606 |
| 88 | 903-912 | SNP | denotes | rs7754840 | tmVar:rs7754840;VariantGroup:4;CorrespondingGene:54901;RS#:7754840;CorrespondingSpecies:9606 |
| 89 | 994-1003 | SNP | denotes | rs1111875 | tmVar:rs1111875;VariantGroup:6;RS#:1111875 |
| 91 | 1080-1090 | SNP | denotes | rs10811661 | tmVar:rs10811661;VariantGroup:1;RS#:10811661 |
| 93 | 1174-1183 | SNP | denotes | rs2237892 | tmVar:rs2237892;VariantGroup:7;CorrespondingGene:3784;RS#:2237892;CorrespondingSpecies:9606 |
| 96 | 1279-1289 | SNP | denotes | Rs13266634 |
PubTatorOnTogoVar
| Id | Subject | Object | Predicate | Lexical cue | resolved_to |
|---|---|---|---|---|---|
| 77 | 649-659 | SNP | denotes | rs13266634 | tmVar:rs13266634;VariantGroup:0;CorrespondingGene:169026;RS#:13266634;CorrespondingSpecies:9606 |
| 78 | 661-670 | SNP | denotes | rs1111875 | tmVar:rs1111875;VariantGroup:6;RS#:1111875 |
| 79 | 672-682 | SNP | denotes | rs10811661 | tmVar:rs10811661;VariantGroup:1;RS#:10811661 |
| 80 | 684-693 | SNP | denotes | rs4402960 | tmVar:rs4402960;VariantGroup:5;CorrespondingGene:10644;RS#:4402960;CorrespondingSpecies:9606 |
| 81 | 695-704 | SNP | denotes | rs8050136 | tmVar:rs8050136;VariantGroup:3;CorrespondingGene:79068;RS#:8050136;CorrespondingSpecies:9606 |
| 82 | 706-714 | SNP | denotes | rs734312 | tmVar:rs734312;VariantGroup:2;CorrespondingGene:7466;RS#:734312;CorrespondingSpecies:9606 |
| 83 | 716-725 | SNP | denotes | rs7754840 | tmVar:rs7754840;VariantGroup:4;CorrespondingGene:54901;RS#:7754840;CorrespondingSpecies:9606 |
| 84 | 730-739 | SNP | denotes | rs2237892 | tmVar:rs2237892;VariantGroup:7;CorrespondingGene:3784;RS#:2237892;CorrespondingSpecies:9606 |
| 88 | 903-912 | SNP | denotes | rs7754840 | tmVar:rs7754840;VariantGroup:4;CorrespondingGene:54901;RS#:7754840;CorrespondingSpecies:9606 |
| 89 | 994-1003 | SNP | denotes | rs1111875 | tmVar:rs1111875;VariantGroup:6;RS#:1111875 |
| 91 | 1080-1090 | SNP | denotes | rs10811661 | tmVar:rs10811661;VariantGroup:1;RS#:10811661 |
| 93 | 1174-1183 | SNP | denotes | rs2237892 | tmVar:rs2237892;VariantGroup:7;CorrespondingGene:3784;RS#:2237892;CorrespondingSpecies:9606 |
| 96 | 1279-1289 | SNP | denotes | Rs13266634 | |
| T6 | 706-714 | SNP | denotes | rs734312 | tmVar:rs734312;VariantGroup:2;CorrespondingGene:7466;RS#:734312;CorrespondingSpecies:9606 |
| T7 | 716-725 | SNP | denotes | rs7754840 | tmVar:rs7754840;VariantGroup:4;CorrespondingGene:54901;RS#:7754840;CorrespondingSpecies:9606 |
| T8 | 730-739 | SNP | denotes | rs2237892 | tmVar:rs2237892;VariantGroup:7;CorrespondingGene:3784;RS#:2237892;CorrespondingSpecies:9606 |
| T9 | 903-912 | SNP | denotes | rs7754840 | tmVar:rs7754840;VariantGroup:4;CorrespondingGene:54901;RS#:7754840;CorrespondingSpecies:9606 |
| T10 | 994-1003 | SNP | denotes | rs1111875 | tmVar:rs1111875;VariantGroup:6;RS#:1111875 |
| T11 | 1080-1090 | SNP | denotes | rs10811661 | tmVar:rs10811661;VariantGroup:1;RS#:10811661 |
| T12 | 1174-1183 | SNP | denotes | rs2237892 | tmVar:rs2237892;VariantGroup:7;CorrespondingGene:3784;RS#:2237892;CorrespondingSpecies:9606 |
| T13 | 1279-1289 | SNP | denotes | Rs13266634 | |
| T1 | 649-659 | SNP | denotes | rs13266634 | tmVar:rs13266634;VariantGroup:0;CorrespondingGene:169026;RS#:13266634;CorrespondingSpecies:9606 |
| T2 | 661-670 | SNP | denotes | rs1111875 | tmVar:rs1111875;VariantGroup:6;RS#:1111875 |
| T3 | 672-682 | SNP | denotes | rs10811661 | tmVar:rs10811661;VariantGroup:1;RS#:10811661 |
| T4 | 684-693 | SNP | denotes | rs4402960 | tmVar:rs4402960;VariantGroup:5;CorrespondingGene:10644;RS#:4402960;CorrespondingSpecies:9606 |
| T5 | 695-704 | SNP | denotes | rs8050136 | tmVar:rs8050136;VariantGroup:3;CorrespondingGene:79068;RS#:8050136;CorrespondingSpecies:9606 |