PubMed:18849583 / 1406-1829
Annnotations
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T11 | 0-423 | Sentence | denotes | Affinity chromatography of cell extracts on a Gal8-affinity column and binding experiments with plant lectins, Maakia Amurensis and Sambucus Nigra, revealed that alpha(3)beta(1), alpha(5)beta(1), and alpha(v)beta(1) integrins are major counterreceptors of Gal8 in TM cells and that TM cell beta(1) integrins carry predominantly alpha2-3-sialylated glycans, which are high-affinity ligands for Gal8 but not for Gal1 or Gal3. |
| T11 | 0-423 | Sentence | denotes | Affinity chromatography of cell extracts on a Gal8-affinity column and binding experiments with plant lectins, Maakia Amurensis and Sambucus Nigra, revealed that alpha(3)beta(1), alpha(5)beta(1), and alpha(v)beta(1) integrins are major counterreceptors of Gal8 in TM cells and that TM cell beta(1) integrins carry predominantly alpha2-3-sialylated glycans, which are high-affinity ligands for Gal8 but not for Gal1 or Gal3. |
| T11 | 0-423 | Sentence | denotes | Affinity chromatography of cell extracts on a Gal8-affinity column and binding experiments with plant lectins, Maakia Amurensis and Sambucus Nigra, revealed that alpha(3)beta(1), alpha(5)beta(1), and alpha(v)beta(1) integrins are major counterreceptors of Gal8 in TM cells and that TM cell beta(1) integrins carry predominantly alpha2-3-sialylated glycans, which are high-affinity ligands for Gal8 but not for Gal1 or Gal3. |
GlycoBiology-FMA
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T26 | 60-66 | FMAID:183891 | denotes | column |
| _T27 | 60-66 | FMAID:76737 | denotes | column |
| _T28 | 96-101 | FMAID:214748 | denotes | plant |
| _T29 | 216-225 | FMAID:67222 | denotes | integrins |
| _T30 | 216-225 | FMAID:165244 | denotes | integrins |
| _T31 | 267-272 | FMAID:169002 | denotes | cells |
| _T32 | 267-272 | FMAID:68646 | denotes | cells |
| _T33 | 298-307 | FMAID:165244 | denotes | integrins |
| _T34 | 298-307 | FMAID:67222 | denotes | integrins |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 264-266 | http://www.uniprot.org/uniprot/P07204 | denotes | TM |
| T12 | 282-284 | http://www.uniprot.org/uniprot/P07204 | denotes | TM |
| T22 | 264-266 | http://www.uniprot.org/uniprot/Q14264 | denotes | TM |
| T23 | 282-284 | http://www.uniprot.org/uniprot/Q14264 | denotes | TM |
| T33 | 264-266 | http://www.uniprot.org/uniprot/P60507 | denotes | TM |
| T34 | 282-284 | http://www.uniprot.org/uniprot/P60507 | denotes | TM |
| T44 | 264-266 | http://www.uniprot.org/uniprot/P60608 | denotes | TM |
| T45 | 282-284 | http://www.uniprot.org/uniprot/P60608 | denotes | TM |
| T55 | 264-266 | http://www.uniprot.org/uniprot/P60508 | denotes | TM |
| T56 | 282-284 | http://www.uniprot.org/uniprot/P60508 | denotes | TM |
| T66 | 264-266 | http://www.uniprot.org/uniprot/Q902F9 | denotes | TM |
| T67 | 282-284 | http://www.uniprot.org/uniprot/Q902F9 | denotes | TM |
| T77 | 264-266 | http://www.uniprot.org/uniprot/Q9NX77 | denotes | TM |
| T78 | 282-284 | http://www.uniprot.org/uniprot/Q9NX77 | denotes | TM |
| T88 | 264-266 | http://www.uniprot.org/uniprot/O42043 | denotes | TM |
| T89 | 282-284 | http://www.uniprot.org/uniprot/O42043 | denotes | TM |
| T99 | 264-266 | http://www.uniprot.org/uniprot/O71037 | denotes | TM |
| T100 | 282-284 | http://www.uniprot.org/uniprot/O71037 | denotes | TM |
| T110 | 264-266 | http://www.uniprot.org/uniprot/P61565 | denotes | TM |
| T111 | 282-284 | http://www.uniprot.org/uniprot/P61565 | denotes | TM |
| T121 | 264-266 | http://www.uniprot.org/uniprot/P61566 | denotes | TM |
| T122 | 282-284 | http://www.uniprot.org/uniprot/P61566 | denotes | TM |
| T132 | 264-266 | http://www.uniprot.org/uniprot/P61570 | denotes | TM |
| T133 | 282-284 | http://www.uniprot.org/uniprot/P61570 | denotes | TM |
| T143 | 264-266 | http://www.uniprot.org/uniprot/Q69384 | denotes | TM |
| T144 | 282-284 | http://www.uniprot.org/uniprot/Q69384 | denotes | TM |
| T154 | 264-266 | http://www.uniprot.org/uniprot/P61567 | denotes | TM |
| T155 | 282-284 | http://www.uniprot.org/uniprot/P61567 | denotes | TM |
| T165 | 264-266 | http://www.uniprot.org/uniprot/Q902F8 | denotes | TM |
| T166 | 282-284 | http://www.uniprot.org/uniprot/Q902F8 | denotes | TM |
| T176 | 264-266 | http://www.uniprot.org/uniprot/Q9UKH3 | denotes | TM |
| T177 | 282-284 | http://www.uniprot.org/uniprot/Q9UKH3 | denotes | TM |
| T187 | 264-266 | http://www.uniprot.org/uniprot/P60509 | denotes | TM |
| T188 | 282-284 | http://www.uniprot.org/uniprot/P60509 | denotes | TM |
| T198 | 264-266 | http://www.uniprot.org/uniprot/P61550 | denotes | TM |
| T199 | 282-284 | http://www.uniprot.org/uniprot/P61550 | denotes | TM |
| T209 | 264-266 | http://www.uniprot.org/uniprot/Q9UQF0 | denotes | TM |
| T210 | 282-284 | http://www.uniprot.org/uniprot/Q9UQF0 | denotes | TM |
| T220 | 264-266 | http://www.uniprot.org/uniprot/Q9N2J8 | denotes | TM |
| T221 | 282-284 | http://www.uniprot.org/uniprot/Q9N2J8 | denotes | TM |
| T231 | 264-266 | http://www.uniprot.org/uniprot/Q9N2K0 | denotes | TM |
| T232 | 282-284 | http://www.uniprot.org/uniprot/Q9N2K0 | denotes | TM |
| T235 | 170-176 | http://www.uniprot.org/uniprot/Q92988 | denotes | beta(1 |
| T236 | 187-193 | http://www.uniprot.org/uniprot/Q92988 | denotes | beta(1 |
| T237 | 208-214 | http://www.uniprot.org/uniprot/Q92988 | denotes | beta(1 |
| T238 | 290-296 | http://www.uniprot.org/uniprot/Q92988 | denotes | beta(1 |
| T241 | 208-225 | http://www.uniprot.org/uniprot/O95965 | denotes | beta(1) integrins |
| T242 | 290-307 | http://www.uniprot.org/uniprot/O95965 | denotes | beta(1) integrins |
| T245 | 208-225 | http://www.uniprot.org/uniprot/Q8WUM6 | denotes | beta(1) integrins |
| T246 | 290-307 | http://www.uniprot.org/uniprot/Q8WUM6 | denotes | beta(1) integrins |
| T250 | 162-174 | http://www.uniprot.org/uniprot/O14756 | denotes | alpha(3)beta |
| T251 | 170-184 | http://www.uniprot.org/uniprot/Q9UQI1 | denotes | beta(1), alpha |
| T252 | 187-205 | http://www.uniprot.org/uniprot/Q9UQI1 | denotes | beta(1), and alpha |
uniprot-mouse
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 264-266 | http://www.uniprot.org/uniprot/P15306 | denotes | TM |
| T12 | 282-284 | http://www.uniprot.org/uniprot/P15306 | denotes | TM |
| T22 | 264-266 | http://www.uniprot.org/uniprot/Q811M9 | denotes | TM |
| T23 | 282-284 | http://www.uniprot.org/uniprot/Q811M9 | denotes | TM |
| T28 | 208-225 | http://www.uniprot.org/uniprot/P09055 | denotes | beta(1) integrins |
| T29 | 290-307 | http://www.uniprot.org/uniprot/P09055 | denotes | beta(1) integrins |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13 | 111-127 | http://purl.bioontology.org/ontology/NCBITAXON/37501 | denotes | Maakia Amurensis |
| T14 | 132-146 | http://purl.bioontology.org/ontology/NCBITAXON/4202 | denotes | Sambucus Nigra |
| T15 | 170-174 | http://purl.bioontology.org/ontology/NCBITAXON/3554 | denotes | beta |
| T16 | 170-174 | http://purl.bioontology.org/ontology/NCBITAXON/158455 | denotes | beta |
| T17 | 187-191 | http://purl.bioontology.org/ontology/NCBITAXON/158455 | denotes | beta |
| T18 | 187-191 | http://purl.bioontology.org/ontology/NCBITAXON/3554 | denotes | beta |
| T19 | 208-212 | http://purl.bioontology.org/ontology/NCBITAXON/158455 | denotes | beta |
| T20 | 208-212 | http://purl.bioontology.org/ontology/NCBITAXON/3554 | denotes | beta |
| T21 | 267-272 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T22 | 290-294 | http://purl.bioontology.org/ontology/NCBITAXON/3554 | denotes | beta |
| T23 | 290-294 | http://purl.bioontology.org/ontology/NCBITAXON/158455 | denotes | beta |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T14 | 337-347 | http://purl.obolibrary.org/obo/GO_0097503 | denotes | sialylated |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T9 | 381-388 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | ligands |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T5 | 27-31 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T6 | 285-289 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T12 | 267-272 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
Lectin
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| Lectin_T4 | 418-422 | https://acgg.asia/db/lfdb/LfDB0065 | denotes | Gal3 |
GlyTouCan-IUPAC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| GlycanIUPAC_T13 | 410-414 | "http://rdf.glycoinfo.org/glycan/G32871SU" | denotes | Gal1 |
| GlycanIUPAC_T15 | 410-414 | "http://rdf.glycoinfo.org/glycan/G07087RJ" | denotes | Gal1 |
| GlycanIUPAC_T17 | 410-414 | "http://rdf.glycoinfo.org/glycan/G40843KY" | denotes | Gal1 |
| GlycanIUPAC_T19 | 410-414 | "http://rdf.glycoinfo.org/glycan/G68158BT" | denotes | Gal1 |
| GlycanIUPAC_T21 | 410-414 | "http://rdf.glycoinfo.org/glycan/G75623HL" | denotes | Gal1 |
| GlycanIUPAC_T23 | 410-414 | "http://rdf.glycoinfo.org/glycan/G08908FU" | denotes | Gal1 |
| GlycanIUPAC_T25 | 410-414 | "http://rdf.glycoinfo.org/glycan/G38028NH" | denotes | Gal1 |
| GlycanIUPAC_T27 | 410-414 | "http://rdf.glycoinfo.org/glycan/G48426CT" | denotes | Gal1 |
| GlycanIUPAC_T29 | 410-414 | "http://rdf.glycoinfo.org/glycan/G34526ZS" | denotes | Gal1 |
| GlycanIUPAC_T31 | 410-414 | "http://rdf.glycoinfo.org/glycan/G25681JY" | denotes | Gal1 |
| GlycanIUPAC_T33 | 410-414 | "http://rdf.glycoinfo.org/glycan/G75236KD" | denotes | Gal1 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T11 | 0-423 | Sentence | denotes | Affinity chromatography of cell extracts on a Gal8-affinity column and binding experiments with plant lectins, Maakia Amurensis and Sambucus Nigra, revealed that alpha(3)beta(1), alpha(5)beta(1), and alpha(v)beta(1) integrins are major counterreceptors of Gal8 in TM cells and that TM cell beta(1) integrins carry predominantly alpha2-3-sialylated glycans, which are high-affinity ligands for Gal8 but not for Gal1 or Gal3. |
| T11 | 0-423 | Sentence | denotes | Affinity chromatography of cell extracts on a Gal8-affinity column and binding experiments with plant lectins, Maakia Amurensis and Sambucus Nigra, revealed that alpha(3)beta(1), alpha(5)beta(1), and alpha(v)beta(1) integrins are major counterreceptors of Gal8 in TM cells and that TM cell beta(1) integrins carry predominantly alpha2-3-sialylated glycans, which are high-affinity ligands for Gal8 but not for Gal1 or Gal3. |
| T11 | 0-423 | Sentence | denotes | Affinity chromatography of cell extracts on a Gal8-affinity column and binding experiments with plant lectins, Maakia Amurensis and Sambucus Nigra, revealed that alpha(3)beta(1), alpha(5)beta(1), and alpha(v)beta(1) integrins are major counterreceptors of Gal8 in TM cells and that TM cell beta(1) integrins carry predominantly alpha2-3-sialylated glycans, which are high-affinity ligands for Gal8 but not for Gal1 or Gal3. |
GlyCosmos15-Sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 0-423 | Sentence | denotes | Affinity chromatography of cell extracts on a Gal8-affinity column and binding experiments with plant lectins, Maakia Amurensis and Sambucus Nigra, revealed that alpha(3)beta(1), alpha(5)beta(1), and alpha(v)beta(1) integrins are major counterreceptors of Gal8 in TM cells and that TM cell beta(1) integrins carry predominantly alpha2-3-sialylated glycans, which are high-affinity ligands for Gal8 but not for Gal1 or Gal3. |
GlyCosmos15-Lectin-Jamboree
| Id | Subject | Object | Predicate | Lexical cue | glycosmos_id |
|---|---|---|---|---|---|
| T2 | 418-422 | Lectin | denotes | Gal3 | GL_004254 |
Lectin-Jamboree-Sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11 | 0-423 | Sentence | denotes | Affinity chromatography of cell extracts on a Gal8-affinity column and binding experiments with plant lectins, Maakia Amurensis and Sambucus Nigra, revealed that alpha(3)beta(1), alpha(5)beta(1), and alpha(v)beta(1) integrins are major counterreceptors of Gal8 in TM cells and that TM cell beta(1) integrins carry predominantly alpha2-3-sialylated glycans, which are high-affinity ligands for Gal8 but not for Gal1 or Gal3. |
Lectin-Jamboree-small
| Id | Subject | Object | Predicate | Lexical cue | glycosmos_id |
|---|---|---|---|---|---|
| T2 | 418-422 | Lectin | denotes | Gal3 | GL_000491 |
GlyCosmos15-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T12 | 264-266 | Body_part | denotes | TM | http://purl.obolibrary.org/obo/UBERON_0005969 |
| T13 | 282-284 | Body_part | denotes | TM | http://purl.obolibrary.org/obo/UBERON_0005969 |
GlyCosmos15-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T2 | 132-146 | OrganismTaxon | denotes | Sambucus Nigra | 4202 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T2 | 132-146 | OrganismTaxon | denotes | Sambucus Nigra | 4202 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T12 | 264-266 | Body_part | denotes | TM | http://purl.obolibrary.org/obo/UBERON_0005969 |
| T13 | 282-284 | Body_part | denotes | TM | http://purl.obolibrary.org/obo/UBERON_0005969 |