PubMed:1851743
Annnotations
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-80 | Sentence | denotes | Inhibition of protein phosphatases by okadaic acid induces AP1 in human T cells. |
| T2 | 81-335 | Sentence | denotes | To examine the role of protein phosphatases in T cell activation, Jurkat cells were treated with okadaic acid, an inhibitor of type 1 and 2A phosphatases, and nuclear extracts were examined for the presence of AP1 as a measure of early T cell activation. |
| T3 | 336-389 | Sentence | denotes | Okadaic acid was found to be a potent inducer of AP1. |
| T4 | 390-594 | Sentence | denotes | In contrast to phorbol esters such as phorbol myristate acetate (PMA), the induction of AP1 by okadaic acid occurs predominantly by transcriptional activation of the jun and fos family of proto-oncogenes. |
| T5 | 595-722 | Sentence | denotes | Surprisingly, while the addition of phytohemagglutinin further enhanced the induction of AP1, the addition of PMA inhibited it. |
| T6 | 723-931 | Sentence | denotes | Okadaic acid treatment was found to dramatically increase mRNA transcripts of the jun family of proto-oncogenes including c-jun, junD, and junB and to a lesser extent the fos family including c-fos and fra-1. |
| T7 | 932-1020 | Sentence | denotes | By comparison, PMA is a very inefficient inducer of the jun gene family in Jurkat cells. |
| T8 | 1021-1141 | Sentence | denotes | Similar to its effect on the induction of AP1 by okadaic acid, PMA inhibits the induction of c-jun mRNA by okadaic acid. |
| T9 | 1142-1277 | Sentence | denotes | Transfection of c-jun promoter constructs confirmed the marked difference between PMA and okadaic acid in inducing c-jun transcription. |
| T10 | 1278-1476 | Sentence | denotes | The induction of AP1 by okadaic acid suggests that protein phosphatases 1 and 2A (PP1 and PP2A) may be involved in T cell activation as important negative regulators of the transcription factor AP1. |
| T1 | 0-80 | Sentence | denotes | Inhibition of protein phosphatases by okadaic acid induces AP1 in human T cells. |
| T2 | 81-335 | Sentence | denotes | To examine the role of protein phosphatases in T cell activation, Jurkat cells were treated with okadaic acid, an inhibitor of type 1 and 2A phosphatases, and nuclear extracts were examined for the presence of AP1 as a measure of early T cell activation. |
| T3 | 336-389 | Sentence | denotes | Okadaic acid was found to be a potent inducer of AP1. |
| T4 | 390-594 | Sentence | denotes | In contrast to phorbol esters such as phorbol myristate acetate (PMA), the induction of AP1 by okadaic acid occurs predominantly by transcriptional activation of the jun and fos family of proto-oncogenes. |
| T5 | 595-722 | Sentence | denotes | Surprisingly, while the addition of phytohemagglutinin further enhanced the induction of AP1, the addition of PMA inhibited it. |
| T6 | 723-931 | Sentence | denotes | Okadaic acid treatment was found to dramatically increase mRNA transcripts of the jun family of proto-oncogenes including c-jun, junD, and junB and to a lesser extent the fos family including c-fos and fra-1. |
| T7 | 932-1020 | Sentence | denotes | By comparison, PMA is a very inefficient inducer of the jun gene family in Jurkat cells. |
| T8 | 1021-1141 | Sentence | denotes | Similar to its effect on the induction of AP1 by okadaic acid, PMA inhibits the induction of c-jun mRNA by okadaic acid. |
| T9 | 1142-1277 | Sentence | denotes | Transfection of c-jun promoter constructs confirmed the marked difference between PMA and okadaic acid in inducing c-jun transcription. |
| T10 | 1278-1476 | Sentence | denotes | The induction of AP1 by okadaic acid suggests that protein phosphatases 1 and 2A (PP1 and PP2A) may be involved in T cell activation as important negative regulators of the transcription factor AP1. |
jnlpba-st-training
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 14-34 | protein | denotes | protein phosphatases |
| T2 | 59-62 | protein | denotes | AP1 |
| T3 | 66-79 | cell_type | denotes | human T cells |
| T4 | 104-124 | protein | denotes | protein phosphatases |
| T5 | 147-159 | cell_line | denotes | Jurkat cells |
| T6 | 208-234 | protein | denotes | type 1 and 2A phosphatases |
| T7 | 291-294 | protein | denotes | AP1 |
| T8 | 385-388 | protein | denotes | AP1 |
| T9 | 478-481 | protein | denotes | AP1 |
| T10 | 556-574 | DNA | denotes | jun and fos family |
| T11 | 578-593 | DNA | denotes | proto-oncogenes |
| T12 | 631-649 | protein | denotes | phytohemagglutinin |
| T13 | 684-687 | protein | denotes | AP1 |
| T14 | 781-797 | RNA | denotes | mRNA transcripts |
| T15 | 805-834 | DNA | denotes | jun family of proto-oncogenes |
| T16 | 845-850 | DNA | denotes | c-jun |
| T17 | 852-856 | DNA | denotes | junD |
| T18 | 862-866 | DNA | denotes | junB |
| T19 | 894-904 | DNA | denotes | fos family |
| T20 | 915-920 | DNA | denotes | c-fos |
| T21 | 925-930 | DNA | denotes | fra-1 |
| T22 | 988-1003 | DNA | denotes | jun gene family |
| T23 | 1007-1019 | cell_line | denotes | Jurkat cells |
| T24 | 1063-1066 | protein | denotes | AP1 |
| T25 | 1114-1124 | RNA | denotes | c-jun mRNA |
| T26 | 1158-1183 | DNA | denotes | c-jun promoter constructs |
| T27 | 1257-1262 | DNA | denotes | c-jun |
| T28 | 1295-1298 | protein | denotes | AP1 |
| T29 | 1329-1358 | protein | denotes | protein phosphatases 1 and 2A |
| T30 | 1360-1363 | protein | denotes | PP1 |
| T31 | 1368-1372 | protein | denotes | PP2A |
| T32 | 1451-1471 | protein | denotes | transcription factor |
| T33 | 1472-1475 | protein | denotes | AP1 |
semrep-sample
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| E1-ti-1 | 14-34 | cui:C0031686 | denotes | protein phosphatases |
| E2-ti-1 | 38-50 | cui:C0069389 | denotes | okadaic acid |
| E3-ti-1 | 59-62 | cui:C0085828 | denotes | AP1 |
| E4-ti-1 | 66-79 | cui:C0427861 | denotes | human T cells |
| T1 | 0-10 | INHIBITS | denotes | Inhibition |
| E1-ab-1 | 96-100 | cui:C0035820 | denotes | role |
| E2-ab-1 | 104-124 | cui:C0031686 | denotes | protein phosphatases |
| E3-ab-1 | 128-145 | cui:C1155065 | denotes | T cell activation |
| E4-ab-1 | 147-159 | cui:C0376448 | denotes | Jurkat cells |
| E5-ab-1 | 178-190 | cui:C0069389 | denotes | okadaic acid |
| E6-ab-1 | 195-204 | cui:C0243077 | denotes | inhibitor |
| E7-ab-1 | 208-214 | cui:C0441729 | denotes | type 1 |
| E8-ab-1 | 222-234 | cui:C0031678 | denotes | phosphatases |
| E9-ab-1 | 240-256 | cui:C1518434 | denotes | nuclear extracts |
| E10-ab-1 | 291-294 | cui:C0085828 | denotes | AP1 |
| E11-ab-1 | 300-307 | cui:C0242485 | denotes | measure |
| E12-ab-1 | 311-316 | cui:C1279919 | denotes | early |
| E13-ab-1 | 317-334 | cui:C1155065 | denotes | T cell activation |
| T2 | 96-100 | AFFECTS | denotes | role |
| T3 | 279-287 | COEXISTS_WITH | denotes | presence |
| E1-ab-2 | 336-348 | cui:C0069389 | denotes | Okadaic acid |
| E2-ab-2 | 367-373 | cui:C0237399 | denotes | potent |
| E3-ab-2 | 385-388 | cui:C0085828 | denotes | AP1 |
| T4 | 374-381 | STIMULATES | denotes | inducer |
| E1-ab-3 | 405-419 | cui:C0031586 | denotes | phorbol esters |
| E2-ab-3 | 428-453 | cui:C0039654 | denotes | phorbol myristate acetate |
| E3-ab-3 | 465-474 | cui:C0857127 | denotes | induction |
| E4-ab-3 | 478-481 | cui:C0085828 | denotes | AP1 |
| E5-ab-3 | 485-497 | cui:C0069389 | denotes | okadaic acid |
| E6-ab-3 | 522-548 | cui:C0162493 | denotes | transcriptional activation |
| E7-ab-3 | 556-559 | cui:C0085296 | denotes | jun |
| E8-ab-3 | 564-567 | cui:C0085940 | denotes | fos |
| E9-ab-3 | 568-574 | cui:C0015576 | denotes | family |
| E10-ab-3 | 578-593 | cui:C0033713 | denotes | proto-oncogenes |
| T5 | 405-453 | ISA | denotes | phorbol esters such as phorbol myristate acetate |
| T6 | 465-474 | STIMULATES | denotes | induction |
| E1-ab-4 | 619-627 | cui:C0442796 | denotes | addition |
| E2-ab-4 | 631-649 | cui:C0031858 | denotes | phytohemagglutinin |
| E3-ab-4 | 650-657 | cui:C1517331 | denotes | further |
| E4-ab-4 | 671-680 | cui:C0857127 | denotes | induction |
| E5-ab-4 | 684-687 | cui:C0085828 | denotes | AP1 |
| E6-ab-4 | 693-701 | cui:C0442796 | denotes | addition |
| E7-ab-4 | 705-708 | cui:C0039654 | denotes | PMA |
| T7 | 671-680 | STIMULATES | denotes | induction |
| E1-ab-5 | 723-735 | cui:C0069389 | denotes | Okadaic acid |
| E2-ab-5 | 781-785 | cui:C0035696 | denotes | mRNA |
| E3-ab-5 | 786-797 | cui:C1519595 | denotes | transcripts |
| E4-ab-5 | 805-808 | cui:C0085296 | denotes | jun |
| E5-ab-5 | 809-815 | cui:C0015576 | denotes | family |
| E6-ab-5 | 819-834 | cui:C0033713 | denotes | proto-oncogenes |
| E7-ab-5 | 845-850 | cui:C0085942 | denotes | c-jun |
| E8-ab-5 | 852-856 | cui:C0812312 | denotes | junD |
| E9-ab-5 | 862-866 | cui:C0812313 | denotes | junB |
| E10-ab-5 | 876-882 | cui:C0547044 | denotes | lesser |
| E11-ab-5 | 883-889 | cui:C0439792 | denotes | extent |
| E12-ab-5 | 894-897 | cui:C0085940 | denotes | fos |
| E13-ab-5 | 898-904 | cui:C0015576 | denotes | family |
| E14-ab-5 | 915-920 | cui:C0085301 | denotes | c-fos |
| E15-ab-5 | 925-928 | cui:C0086315 | denotes | fra |
| E1-ab-6 | 947-950 | cui:C0039654 | denotes | PMA |
| E2-ab-6 | 956-960 | cui:C0442824 | denotes | very |
| E3-ab-6 | 961-972 | cui:C0231185 | denotes | inefficient |
| E4-ab-6 | 988-991 | cui:C0085296 | denotes | jun |
| E5-ab-6 | 992-1003 | cui:C1517488 | denotes | gene family |
| E6-ab-6 | 1007-1019 | cui:C0376448 | denotes | Jurkat cells |
| T8 | 973-980 | STIMULATES | denotes | inducer |
| T9 | 1004-1006 | LOCATION_OF | denotes | in |
| E1-ab-7 | 1021-1028 | cui:C0871364 | denotes | Similar |
| E2-ab-7 | 1036-1042 | cui:C1280500 | denotes | effect |
| E3-ab-7 | 1050-1059 | cui:C0857127 | denotes | induction |
| E4-ab-7 | 1063-1066 | cui:C0085828 | denotes | AP1 |
| E5-ab-7 | 1070-1082 | cui:C0069389 | denotes | okadaic acid |
| E6-ab-7 | 1084-1087 | cui:C0039654 | denotes | PMA |
| E7-ab-7 | 1101-1110 | cui:C0857127 | denotes | induction |
| E8-ab-7 | 1114-1119 | cui:C0085942 | denotes | c-jun |
| E9-ab-7 | 1120-1124 | cui:C0035696 | denotes | mRNA |
| E10-ab-7 | 1128-1140 | cui:C0069389 | denotes | okadaic acid |
| T10 | 1050-1059 | STIMULATES | denotes | induction |
| T11 | 1101-1110 | STIMULATES | denotes | induction |
| E1-ab-8 | 1142-1154 | cui:C0040669 | denotes | Transfection |
| E2-ab-8 | 1158-1163 | cui:C0085942 | denotes | c-jun |
| E3-ab-8 | 1198-1204 | cui:C0522501 | denotes | marked |
| E4-ab-8 | 1205-1215 | cui:C1547020 | denotes | difference |
| E5-ab-8 | 1224-1227 | cui:C0039654 | denotes | PMA |
| E6-ab-8 | 1232-1244 | cui:C0069389 | denotes | okadaic acid |
| E7-ab-8 | 1248-1256 | cui:C0205263 | denotes | inducing |
| E8-ab-8 | 1259-1262 | cui:C0085296 | denotes | jun |
| E9-ab-8 | 1263-1276 | cui:C0040649 | denotes | transcription |
| T12 | 1245-1247 | COEXISTS_WITH | denotes | in |
| T13 | 1245-1247 | COEXISTS_WITH | denotes | in |
| E1-ab-9 | 1282-1291 | cui:C0857127 | denotes | induction |
| E2-ab-9 | 1295-1298 | cui:C0085828 | denotes | AP1 |
| E3-ab-9 | 1302-1314 | cui:C0069389 | denotes | okadaic acid |
| E4-ab-9 | 1329-1358 | cui:C0031686 | denotes | protein phosphatases 1 and 2A |
| E5-ab-9 | 1393-1410 | cui:C1155065 | denotes | T cell activation |
| E6-ab-9 | 1424-1432 | cui:C0205160 | denotes | negative |
| E7-ab-9 | 1451-1471 | cui:C0040648 | denotes | transcription factor |
| E8-ab-9 | 1472-1475 | cui:C0085828 | denotes | AP1 |
| T14 | 1451-1475 | ISA | denotes | transcription factor AP1 |
| T15 | 1282-1291 | STIMULATES | denotes | induction |
| T16 | 1381-1389 | AFFECTS | denotes | involved |
| R1 | E2-ti-1 | T1 | subjectOf | okadaic acid,Inhibition |
| R2 | E1-ti-1 | T1 | objectOf | protein phosphatases,Inhibition |
| R3 | E2-ab-1 | T2 | subjectOf | protein phosphatases,role |
| R4 | E3-ab-1 | T2 | objectOf | T cell activation,role |
| R5 | E8-ab-1 | T3 | subjectOf | phosphatases,presence |
| R6 | E10-ab-1 | T3 | objectOf | AP1,presence |
| R7 | E1-ab-2 | T4 | subjectOf | Okadaic acid,inducer |
| R8 | E3-ab-2 | T4 | objectOf | AP1,inducer |
| R9 | E2-ab-3 | T5 | subjectOf | phorbol myristate acetate,phorbol esters such as phorbol myristate acetate |
| R10 | E1-ab-3 | T5 | objectOf | phorbol esters,phorbol esters such as phorbol myristate acetate |
| R11 | E5-ab-3 | T6 | subjectOf | okadaic acid,induction |
| R12 | E4-ab-3 | T6 | objectOf | AP1,induction |
| R13 | E7-ab-4 | T7 | subjectOf | PMA,induction |
| R14 | E5-ab-4 | T7 | objectOf | AP1,induction |
| R15 | E1-ab-6 | T8 | subjectOf | PMA,inducer |
| R16 | E5-ab-6 | T8 | objectOf | gene family,inducer |
| R17 | E6-ab-6 | T9 | subjectOf | Jurkat cells,in |
| R18 | E5-ab-6 | T9 | objectOf | gene family,in |
| R19 | E5-ab-7 | T10 | subjectOf | okadaic acid,induction |
| R20 | E4-ab-7 | T10 | objectOf | AP1,induction |
| R21 | E10-ab-7 | T11 | subjectOf | okadaic acid,induction |
| R22 | E8-ab-7 | T11 | objectOf | c-jun,induction |
| R23 | E6-ab-8 | T12 | subjectOf | okadaic acid,in |
| R24 | E8-ab-8 | T12 | objectOf | jun,in |
| R25 | E5-ab-8 | T13 | subjectOf | PMA,in |
| R26 | E8-ab-8 | T13 | objectOf | jun,in |
| R27 | E8-ab-9 | T14 | subjectOf | AP1,transcription factor AP1 |
| R28 | E7-ab-9 | T14 | objectOf | transcription factor,transcription factor AP1 |
| R29 | E3-ab-9 | T15 | subjectOf | okadaic acid,induction |
| R30 | E2-ab-9 | T15 | objectOf | AP1,induction |
| R31 | E4-ab-9 | T16 | subjectOf | protein phosphatases 1 and 2A,involved |
| R32 | E5-ab-9 | T16 | objectOf | T cell activation,involved |
pubmed-sentences-benchmark
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| S1 | 0-80 | Sentence | denotes | Inhibition of protein phosphatases by okadaic acid induces AP1 in human T cells. |
| S2 | 81-335 | Sentence | denotes | To examine the role of protein phosphatases in T cell activation, Jurkat cells were treated with okadaic acid, an inhibitor of type 1 and 2A phosphatases, and nuclear extracts were examined for the presence of AP1 as a measure of early T cell activation. |
| S3 | 336-389 | Sentence | denotes | Okadaic acid was found to be a potent inducer of AP1. |
| S4 | 390-594 | Sentence | denotes | In contrast to phorbol esters such as phorbol myristate acetate (PMA), the induction of AP1 by okadaic acid occurs predominantly by transcriptional activation of the jun and fos family of proto-oncogenes. |
| S5 | 595-722 | Sentence | denotes | Surprisingly, while the addition of phytohemagglutinin further enhanced the induction of AP1, the addition of PMA inhibited it. |
| S6 | 723-931 | Sentence | denotes | Okadaic acid treatment was found to dramatically increase mRNA transcripts of the jun family of proto-oncogenes including c-jun, junD, and junB and to a lesser extent the fos family including c-fos and fra-1. |
| S7 | 932-1020 | Sentence | denotes | By comparison, PMA is a very inefficient inducer of the jun gene family in Jurkat cells. |
| S8 | 1021-1141 | Sentence | denotes | Similar to its effect on the induction of AP1 by okadaic acid, PMA inhibits the induction of c-jun mRNA by okadaic acid. |
| S9 | 1142-1277 | Sentence | denotes | Transfection of c-jun promoter constructs confirmed the marked difference between PMA and okadaic acid in inducing c-jun transcription. |
| S10 | 1278-1476 | Sentence | denotes | The induction of AP1 by okadaic acid suggests that protein phosphatases 1 and 2A (PP1 and PP2A) may be involved in T cell activation as important negative regulators of the transcription factor AP1. |
genia-medco-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| C1 | 14-34 | NP | denotes | protein phosphatases |
| C2 | 38-50 | NP | denotes | okadaic acid |
| C3 | 59-62 | NP | denotes | AP1 |
| C4 | 66-79 | NP | denotes | human T cells |
| C5 | 104-124 | NP | denotes | protein phosphatases |
| C7 | 128-134 | NP | denotes | T cell |
| C6 | 128-145 | NP | denotes | T cell activation |
| C8 | 147-159 | NP | denotes | Jurkat cells |
| C9 | 178-190 | NP | denotes | okadaic acid |
| C10 | 192-234 | NP | denotes | an inhibitor of type 1 and 2A phosphatases |
| C11 | 291-294 | NP | denotes | AP1 |
| C13 | 317-323 | NP | denotes | T cell |
| C12 | 317-334 | NP | denotes | T cell activation |
| C14 | 336-348 | NP | denotes | Okadaic acid |
| C15 | 385-388 | NP | denotes | AP1 |
| C16 | 428-459 | NP | denotes | phorbol myristate acetate (PMA) |
| C17 | 478-481 | NP | denotes | AP1 |
| C18 | 485-497 | NP | denotes | okadaic acid |
| C19 | 552-593 | NP | denotes | the jun and fos family of proto-oncogenes |
| C20 | 684-687 | NP | denotes | AP1 |
| C21 | 705-708 | NP | denotes | PMA |
| C22 | 723-745 | NP | denotes | Okadaic acid treatment |
| C23 | 801-834 | NP | denotes | the jun family of proto-oncogenes |
| C24 | 890-904 | NP | denotes | the fos family |
| C25 | 947-950 | NP | denotes | PMA |
| C26 | 984-1003 | NP | denotes | the jun gene family |
| C27 | 1007-1019 | NP | denotes | Jurkat cells |
| C28 | 1032-1035 | NP | denotes | its |
| C29 | 1063-1066 | NP | denotes | AP1 |
| C30 | 1070-1082 | NP | denotes | okadaic acid |
| C31 | 1084-1087 | NP | denotes | PMA |
| C32 | 1128-1140 | NP | denotes | okadaic acid |
| C33 | 1224-1227 | NP | denotes | PMA |
| C34 | 1232-1244 | NP | denotes | okadaic acid |
| C35 | 1295-1298 | NP | denotes | AP1 |
| C36 | 1302-1314 | NP | denotes | okadaic acid |
| C37 | 1329-1373 | NP | denotes | protein phosphatases 1 and 2A (PP1 and PP2A) |
| C39 | 1393-1399 | NP | denotes | T cell |
| C38 | 1393-1410 | NP | denotes | T cell activation |
| C40 | 1472-1475 | NP | denotes | AP1 |
| R1 | C5 | C1 | coref-ident | protein phosphatases,protein phosphatases |
| R2 | C7 | C4 | coref-ident | T cell,human T cells |
| R3 | C8 | C7 | coref-other | Jurkat cells,T cell |
| R4 | C9 | C2 | coref-ident | okadaic acid,okadaic acid |
| R5 | C10 | C9 | coref-appos | an inhibitor of type 1 and 2A phosphatases,okadaic acid |
| R6 | C11 | C3 | coref-ident | AP1,AP1 |
| R7 | C13 | C8 | coref-ident | T cell,Jurkat cells |
| R8 | C12 | C6 | coref-ident | T cell activation,T cell activation |
| R9 | C14 | C9 | coref-ident | Okadaic acid,okadaic acid |
| R10 | C15 | C11 | coref-ident | AP1,AP1 |
| R11 | C17 | C15 | coref-ident | AP1,AP1 |
| R12 | C18 | C14 | coref-ident | okadaic acid,Okadaic acid |
| R13 | C20 | C17 | coref-ident | AP1,AP1 |
| R14 | C21 | C16 | coref-ident | PMA,phorbol myristate acetate (PMA) |
| R15 | C22 | C18 | coref-other | Okadaic acid treatment,okadaic acid |
| R16 | C23 | C19 | coref-other | the jun family of proto-oncogenes,the jun and fos family of proto-oncogenes |
| R17 | C24 | C19 | coref-other | the fos family,the jun and fos family of proto-oncogenes |
| R18 | C25 | C21 | coref-ident | PMA,PMA |
| R19 | C26 | C23 | coref-ident | the jun gene family,the jun family of proto-oncogenes |
| R20 | C27 | C13 | coref-ident | Jurkat cells,T cell |
| R21 | C28 | C25 | coref-pron | its,PMA |
| R22 | C29 | C20 | coref-ident | AP1,AP1 |
| R23 | C30 | C18 | coref-ident | okadaic acid,okadaic acid |
| R24 | C31 | C25 | coref-ident | PMA,PMA |
| R25 | C32 | C30 | coref-ident | okadaic acid,okadaic acid |
| R26 | C33 | C31 | coref-ident | PMA,PMA |
| R27 | C34 | C32 | coref-ident | okadaic acid,okadaic acid |
| R28 | C35 | C29 | coref-ident | AP1,AP1 |
| R29 | C36 | C34 | coref-ident | okadaic acid,okadaic acid |
| R30 | C37 | C5 | coref-other | protein phosphatases 1 and 2A (PP1 and PP2A),protein phosphatases |
| R31 | C39 | C27 | coref-ident | T cell,Jurkat cells |
| R32 | C38 | C12 | coref-ident | T cell activation,T cell activation |
| R33 | C40 | C35 | coref-ident | AP1,AP1 |
GENIAcorpus
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 14-34 | protein_family_or_group | denotes | protein phosphatases |
| T2 | 38-50 | other_organic_compound | denotes | okadaic acid |
| T3 | 59-62 | protein_molecule | denotes | AP1 |
| T4 | 66-71 | cell_type | denotes | human |
| T5 | 72-79 | cell_type | denotes | T cells |
| T6 | 104-124 | protein_family_or_group | denotes | protein phosphatases |
| T7 | 128-145 | other_name | denotes | T cell activation |
| T8 | 147-159 | cell_line | denotes | Jurkat cells |
| T9 | 178-190 | other_organic_compound | denotes | okadaic acid |
| T10 | 240-256 | cell_component | denotes | nuclear extracts |
| T11 | 291-294 | protein_molecule | denotes | AP1 |
| T12 | 317-334 | other_name | denotes | T cell activation |
| T13 | 336-348 | other_organic_compound | denotes | Okadaic acid |
| T14 | 385-388 | protein_molecule | denotes | AP1 |
| T15 | 405-419 | other_organic_compound | denotes | phorbol esters |
| T16 | 428-453 | other_organic_compound | denotes | phorbol myristate acetate |
| T17 | 455-458 | other_organic_compound | denotes | PMA |
| T18 | 478-481 | protein_molecule | denotes | AP1 |
| T19 | 485-497 | other_organic_compound | denotes | okadaic acid |
| T20 | 522-548 | other_name | denotes | transcriptional activation |
| T21 | 578-593 | DNA_family_or_group | denotes | proto-oncogenes |
| T22 | 631-649 | protein_molecule | denotes | phytohemagglutinin |
| T23 | 684-687 | protein_molecule | denotes | AP1 |
| T24 | 705-708 | other_organic_compound | denotes | PMA |
| T25 | 723-735 | other_organic_compound | denotes | Okadaic acid |
| T26 | 781-797 | RNA_family_or_group | denotes | mRNA transcripts |
| T27 | 805-834 | DNA_family_or_group | denotes | jun family of proto-oncogenes |
| T28 | 845-850 | DNA_domain_or_region | denotes | c-jun |
| T29 | 852-856 | DNA_domain_or_region | denotes | junD |
| T30 | 862-866 | DNA_domain_or_region | denotes | junB |
| T31 | 894-904 | DNA_family_or_group | denotes | fos family |
| T32 | 915-920 | DNA_domain_or_region | denotes | c-fos |
| T33 | 925-930 | DNA_domain_or_region | denotes | fra-1 |
| T34 | 947-950 | other_organic_compound | denotes | PMA |
| T35 | 988-1003 | DNA_family_or_group | denotes | jun gene family |
| T36 | 1007-1019 | cell_line | denotes | Jurkat cells |
| T37 | 1063-1066 | protein_molecule | denotes | AP1 |
| T38 | 1070-1082 | other_organic_compound | denotes | okadaic acid |
| T39 | 1084-1087 | other_organic_compound | denotes | PMA |
| T40 | 1114-1124 | RNA_family_or_group | denotes | c-jun mRNA |
| T41 | 1128-1140 | other_organic_compound | denotes | okadaic acid |
| T42 | 1158-1163 | DNA_domain_or_region | denotes | c-jun |
| T43 | 1224-1227 | other_organic_compound | denotes | PMA |
| T44 | 1232-1244 | other_organic_compound | denotes | okadaic acid |
| T45 | 1257-1262 | DNA_domain_or_region | denotes | c-jun |
| T46 | 1295-1298 | protein_molecule | denotes | AP1 |
| T47 | 1302-1314 | other_organic_compound | denotes | okadaic acid |
| T48 | 1360-1363 | protein_molecule | denotes | PP1 |
| T49 | 1368-1372 | protein_molecule | denotes | PP2A |
| T50 | 1393-1410 | other_name | denotes | T cell activation |
| T51 | 1451-1471 | protein_family_or_group | denotes | transcription factor |
| T52 | 1472-1475 | protein_molecule | denotes | AP1 |
metamap-sample
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 67-72 | C0086418 | denotes | uman |
| T2 | 73-80 | C0039194 | denotes | cells. |
| T3 | 105-125 | C0031686 | denotes | rotein phosphatases |
| T4 | 15-35 | C0031686 | denotes | rotein phosphatases |
| T5 | 1296-1299 | C0085828 | denotes | P1 |
| T6 | 1452-1476 | C0085828 | denotes | ranscription factor AP1. |
| T7 | 1064-1067 | C0085828 | denotes | P1 |
| T8 | 685-688 | C0085828 | denotes | P1, |
| T9 | 479-482 | C0085828 | denotes | P1 |
| T10 | 386-389 | C0085828 | denotes | P1. |
| T11 | 292-295 | C0085828 | denotes | P1 |
| T12 | 60-63 | C0085828 | denotes | P1 |
| T13 | 1303-1315 | C0069389 | denotes | kadaic acid |
| T14 | 1233-1245 | C0069389 | denotes | kadaic acid |
| T15 | 724-736 | C0069389 | denotes | kadaic acid |
| T16 | 486-498 | C0069389 | denotes | kadaic acid |
| T17 | 337-349 | C0069389 | denotes | kadaic acid |
| T18 | 179-191 | C0069389 | denotes | kadaic acid, |
| T19 | 39-51 | C0069389 | denotes | kadaic acid |
| T20 | 1225-1228 | C0039654 | denotes | MA |
| T21 | 1085-1088 | C0039654 | denotes | MA |
| T22 | 948-951 | C0039654 | denotes | MA |
| T23 | 706-708 | C0039654 | denotes | MA |
| T24 | 429-454 | C0039654 | denotes | horbol myristate acetate |
| T25 | 1283-1292 | C0205263 | denotes | nduction |
| T26 | 1249-1257 | C0205263 | denotes | nducing |
| T27 | 672-681 | C0205263 | denotes | nduction |
| T28 | 466-474 | C0205263 | denotes | nduction |
| T29 | 52-59 | C0205263 | denotes | nduces |
| T30 | 1-11 | C0021469 | denotes | nhibition |
| T31 | 1296-1299 | C3536909 | denotes | P1 |
| T32 | 1064-1067 | C3536909 | denotes | P1 |
| T33 | 1117-1120 | C3536909 | denotes | un |
| T34 | 685-688 | C3536909 | denotes | P1, |
| T35 | 479-482 | C3536909 | denotes | P1 |
| T36 | 557-560 | C3536909 | denotes | un |
| T37 | 386-389 | C3536909 | denotes | P1. |
| T38 | 292-295 | C3536909 | denotes | P1 |
| T39 | 60-63 | C3536909 | denotes | P1 |
| T40 | 1008-1020 | C0376448 | denotes | urkat cells. |
| T41 | 148-159 | C0376448 | denotes | urkat cells |
| T42 | 1121-1125 | C0035696 | denotes | RNA |
| T43 | 782-785 | C0035696 | denotes | RNA |
| T44 | 579-594 | C0033713 | denotes | roto-oncogenes. |
| T45 | 406-420 | C0031586 | denotes | horbol esters |
| T46 | 899-905 | C0015576 | denotes | amily |
| T47 | 569-575 | C0015576 | denotes | amily |
| T48 | 223-235 | C0031678 | denotes | hosphatases, |
| T49 | 632-650 | C0031858 | denotes | hytohemagglutinin |
| T50 | 523-549 | C0162493 | denotes | ranscriptional activation |
| T51 | 1143-1155 | C0040669 | denotes | ransfection |
| T52 | 1264-1277 | C0040649 | denotes | ranscription. |
| T53 | 757-759 | C1883351 | denotes | o |
| T54 | 360-362 | C1883351 | denotes | o |
| T55 | 82-84 | C1883351 | denotes | o |
| T56 | 1394-1411 | C1155065 | denotes | cell activation |
| T57 | 751-756 | C0150312 | denotes | ound |
| T58 | 354-359 | C0150312 | denotes | ound |
| T59 | 1089-1097 | C0018790 | denotes | nhibits |
| T60 | 989-1004 | C1623430 | denotes | un gene family |
| T61 | 936-946 | C1707455 | denotes | omparison, |
| T62 | 1185-1194 | C0750484 | denotes | onfirmed |
| T63 | 659-667 | C2349975 | denotes | nhanced |
| T64 | 916-921 | C0087140 | denotes | -fos |
| T65 | 926-931 | C0812299 | denotes | ra-1. |
| T66 | 773-781 | C0442805 | denotes | ncrease |
| T67 | 710-719 | C0311403 | denotes | nhibited |
| T68 | 846-851 | C0162508 | denotes | -jun, |
| T69 | 301-308 | C0242485 | denotes | easure |
| T70 | 499-505 | C2745955 | denotes | ccurs |
| T71 | 1316-1324 | C1705535 | denotes | uggests |
| T72 | 241-257 | C1518434 | denotes | uclear extracts |
| T73 | 166-178 | C0332293 | denotes | reated with |
| T74 | 1425-1433 | C0205160 | denotes | egative |
| T75 | 1434-1444 | C0182953 | denotes | egulators |
| T76 | 737-746 | C1522326 | denotes | reatment |
| T77 | 1022-1028 | C2348205 | denotes | imilar |
| T78 | 868-871 | C1515981 | denotes | nd |
| T79 | 884-890 | C0439792 | denotes | xtent |
| T80 | 97-101 | C1705810 | denotes | ole |
| T81 | 196-205 | C1999216 | denotes | nhibitor |
| T82 | 1382-1390 | C1314939 | denotes | nvolved |
| T83 | 877-883 | C0547044 | denotes | esser |
| T84 | 263-271 | C0332128 | denotes | xamined |
| T85 | 280-288 | C0392148 | denotes | resence |
| T86 | 1206-1216 | C1705241 | denotes | ifference |
| T87 | 787-798 | C1519595 | denotes | ranscripts |
| T88 | 312-317 | C1279919 | denotes | arly |
| T89 | 1037-1043 | C1280500 | denotes | ffect |
| T90 | 651-658 | C1517331 | denotes | urther |
| T91 | 209-213 | C0332307 | denotes | ype |
| T92 | 1165-1173 | C0086860 | denotes | romoter |
| T93 | 1199-1205 | C0522501 | denotes | arked |
| T94 | 962-973 | C0231185 | denotes | nefficient |
| T95 | 957-961 | C0442824 | denotes | ery |
| T96 | 1174-1183 | C2827421 | denotes | onstructs |
| T97 | 368-374 | C3245505 | denotes | otent |
mondo_disease
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T1 | 455-458 | Disease | denotes | PMA | http://purl.obolibrary.org/obo/MONDO_0016692|http://purl.obolibrary.org/obo/MONDO_0018687 |
| T3 | 705-708 | Disease | denotes | PMA | http://purl.obolibrary.org/obo/MONDO_0016692|http://purl.obolibrary.org/obo/MONDO_0018687 |
| T5 | 925-928 | Disease | denotes | fra | http://purl.obolibrary.org/obo/MONDO_0011462 |
| T6 | 947-950 | Disease | denotes | PMA | http://purl.obolibrary.org/obo/MONDO_0016692|http://purl.obolibrary.org/obo/MONDO_0018687 |
| T8 | 1084-1087 | Disease | denotes | PMA | http://purl.obolibrary.org/obo/MONDO_0016692|http://purl.obolibrary.org/obo/MONDO_0018687 |
| T10 | 1224-1227 | Disease | denotes | PMA | http://purl.obolibrary.org/obo/MONDO_0016692|http://purl.obolibrary.org/obo/MONDO_0018687 |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 66-71 | OrganismTaxon | denotes | human | 9606 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 128-134 | Body_part | denotes | T cell | http://purl.obolibrary.org/obo/CL_0000084 |
| T2 | 317-323 | Body_part | denotes | T cell | http://purl.obolibrary.org/obo/CL_0000084 |
| T3 | 1393-1399 | Body_part | denotes | T cell | http://purl.obolibrary.org/obo/CL_0000084 |
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 72-79 | Cell | denotes | T cells | http://purl.obolibrary.org/obo/CL:0000084 |
| T2 | 128-134 | Cell | denotes | T cell | http://purl.obolibrary.org/obo/CL:0000084 |
| T3 | 317-323 | Cell | denotes | T cell | http://purl.obolibrary.org/obo/CL:0000084 |
| T4 | 1393-1399 | Cell | denotes | T cell | http://purl.obolibrary.org/obo/CL:0000084 |