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sentences

Id Subject Object Predicate Lexical cue
T1 0-51 Sentence denotes Vitamin D receptor expression in human lymphocytes.
T2 52-129 Sentence denotes Signal requirements and characterization by western blots and DNA sequencing.
T3 130-343 Sentence denotes The signals controlling the expression of the receptor protein for 1 alpha,25-dihydroxyvitamin D3 in normal human lymphocytes and the relationship of this protein to the classical vitamin D receptor were examined.
T4 344-550 Sentence denotes Lymphocytes activated with the OKT3 antibody to the T-cell antigen receptor expressed fewer binding sites as compared to lymphocytes that were activated by the polyclonal activator phytohemagglutinin (PHA).
T5 551-687 Sentence denotes However, combination of OKT3 and phorbol myristate acetate produced a concentration of binding sites similar to the PHA-activated cells.
T6 688-853 Sentence denotes The receptor from OKT3 and OKT3 + phorbol myristate acetate-activated lymphocytes exhibited decreased binding to DNA-cellulose compared to PHA-activated lymphocytes.
T7 854-1043 Sentence denotes In lymphocytes activated either by PHA or OKT3 (but not in resting cells), a 50-kDa species cross-reacting with a monoclonal antibody against the intestinal vitamin D receptor was detected.
T8 1044-1261 Sentence denotes Finally, RNA from activated lymphocytes was amplified by polymerase chain reaction using oligonucleotide primers flanking the 196 base pair long region encoding the DNA-binding domain of the human intestinal receptor.
T9 1262-1383 Sentence denotes The amplified product showed an identical nucleotide sequence to the DNA-binding domain of the human intestinal receptor.
T10 1384-1612 Sentence denotes These findings suggest that expression of the 1,25-(OH)2D3 receptor in lymphocytes is triggered by distinct and contingent signals, and that the protein and the mRNA encoding it are identical to the classical vitamin D receptor.
T1 0-51 Sentence denotes Vitamin D receptor expression in human lymphocytes.
T2 52-129 Sentence denotes Signal requirements and characterization by western blots and DNA sequencing.
T3 130-343 Sentence denotes The signals controlling the expression of the receptor protein for 1 alpha,25-dihydroxyvitamin D3 in normal human lymphocytes and the relationship of this protein to the classical vitamin D receptor were examined.
T4 344-550 Sentence denotes Lymphocytes activated with the OKT3 antibody to the T-cell antigen receptor expressed fewer binding sites as compared to lymphocytes that were activated by the polyclonal activator phytohemagglutinin (PHA).
T5 551-687 Sentence denotes However, combination of OKT3 and phorbol myristate acetate produced a concentration of binding sites similar to the PHA-activated cells.
T6 688-853 Sentence denotes The receptor from OKT3 and OKT3 + phorbol myristate acetate-activated lymphocytes exhibited decreased binding to DNA-cellulose compared to PHA-activated lymphocytes.
T7 854-1043 Sentence denotes In lymphocytes activated either by PHA or OKT3 (but not in resting cells), a 50-kDa species cross-reacting with a monoclonal antibody against the intestinal vitamin D receptor was detected.
T8 1044-1261 Sentence denotes Finally, RNA from activated lymphocytes was amplified by polymerase chain reaction using oligonucleotide primers flanking the 196 base pair long region encoding the DNA-binding domain of the human intestinal receptor.
T9 1262-1383 Sentence denotes The amplified product showed an identical nucleotide sequence to the DNA-binding domain of the human intestinal receptor.
T10 1384-1612 Sentence denotes These findings suggest that expression of the 1,25-(OH)2D3 receptor in lymphocytes is triggered by distinct and contingent signals, and that the protein and the mRNA encoding it are identical to the classical vitamin D receptor.

Glycosmos6-MAT

Id Subject Object Predicate Lexical cue
T1 1000-1010 http://purl.obolibrary.org/obo/MAT_0000043 denotes intestinal
T2 1241-1251 http://purl.obolibrary.org/obo/MAT_0000043 denotes intestinal
T3 1363-1373 http://purl.obolibrary.org/obo/MAT_0000043 denotes intestinal

jnlpba-st-training

Id Subject Object Predicate Lexical cue
T1 0-18 protein denotes Vitamin D receptor
T2 33-50 cell_type denotes human lymphocytes
T3 176-192 protein denotes receptor protein
T4 238-255 cell_type denotes human lymphocytes
T5 300-328 protein denotes classical vitamin D receptor
T6 344-355 cell_type denotes Lymphocytes
T7 375-388 protein denotes OKT3 antibody
T8 396-419 protein denotes T-cell antigen receptor
T9 465-476 cell_type denotes lymphocytes
T10 525-543 protein denotes phytohemagglutinin
T11 545-548 protein denotes PHA
T12 575-579 protein denotes OKT3
T13 667-686 cell_line denotes PHA-activated cells
T14 706-710 protein denotes OKT3
T15 715-719 protein denotes OKT3
T16 747-769 cell_type denotes -activated lymphocytes
T17 827-852 cell_type denotes PHA-activated lymphocytes
T18 857-868 cell_type denotes lymphocytes
T19 889-892 protein denotes PHA
T20 896-900 protein denotes OKT3
T21 913-926 cell_type denotes resting cells
T22 931-945 protein denotes 50-kDa species
T23 968-987 protein denotes monoclonal antibody
T24 1000-1029 protein denotes intestinal vitamin D receptor
T25 1062-1083 cell_type denotes activated lymphocytes
T26 1170-1195 DNA denotes 196 base pair long region
T27 1209-1227 protein denotes DNA-binding domain
T28 1235-1260 protein denotes human intestinal receptor
T29 1294-1323 DNA denotes identical nucleotide sequence
T30 1331-1349 protein denotes DNA-binding domain
T31 1357-1382 protein denotes human intestinal receptor
T32 1430-1451 protein denotes 1,25-(OH)2D3 receptor
T33 1455-1466 cell_type denotes lymphocytes
T34 1545-1549 RNA denotes mRNA
T35 1583-1611 protein denotes classical vitamin D receptor

pubmed-sentences-benchmark

Id Subject Object Predicate Lexical cue
S1 0-51 Sentence denotes Vitamin D receptor expression in human lymphocytes.
S2 52-129 Sentence denotes Signal requirements and characterization by western blots and DNA sequencing.
S3 130-343 Sentence denotes The signals controlling the expression of the receptor protein for 1 alpha,25-dihydroxyvitamin D3 in normal human lymphocytes and the relationship of this protein to the classical vitamin D receptor were examined.
S4 344-550 Sentence denotes Lymphocytes activated with the OKT3 antibody to the T-cell antigen receptor expressed fewer binding sites as compared to lymphocytes that were activated by the polyclonal activator phytohemagglutinin (PHA).
S5 551-687 Sentence denotes However, combination of OKT3 and phorbol myristate acetate produced a concentration of binding sites similar to the PHA-activated cells.
S6 688-853 Sentence denotes The receptor from OKT3 and OKT3 + phorbol myristate acetate-activated lymphocytes exhibited decreased binding to DNA-cellulose compared to PHA-activated lymphocytes.
S7 854-1043 Sentence denotes In lymphocytes activated either by PHA or OKT3 (but not in resting cells), a 50-kDa species cross-reacting with a monoclonal antibody against the intestinal vitamin D receptor was detected.
S8 1044-1261 Sentence denotes Finally, RNA from activated lymphocytes was amplified by polymerase chain reaction using oligonucleotide primers flanking the 196 base pair long region encoding the DNA-binding domain of the human intestinal receptor.
S9 1262-1383 Sentence denotes The amplified product showed an identical nucleotide sequence to the DNA-binding domain of the human intestinal receptor.
S10 1384-1612 Sentence denotes These findings suggest that expression of the 1,25-(OH)2D3 receptor in lymphocytes is triggered by distinct and contingent signals, and that the protein and the mRNA encoding it are identical to the classical vitamin D receptor.

genia-medco-coref

Id Subject Object Predicate Lexical cue
C1 0-18 NP denotes Vitamin D receptor
C2 33-50 NP denotes human lymphocytes
C3 172-192 NP denotes the receptor protein
C4 231-255 NP denotes normal human lymphocytes
C5 280-292 NP denotes this protein
C7 310-328 NP denotes vitamin D receptor
C6 296-328 NP denotes the classical vitamin D receptor
C8 344-355 NP denotes Lymphocytes
C9 371-388 NP denotes the OKT3 antibody
C10 465-476 NP denotes lymphocytes
C11 477-481 NP denotes that
C12 500-549 NP denotes the polyclonal activator phytohemagglutinin (PHA)
C13 575-579 NP denotes OKT3
C14 663-686 NP denotes the PHA-activated cells
C15 706-710 NP denotes OKT3
C16 715-719 NP denotes OKT3
C17 758-769 NP denotes lymphocytes
C18 827-852 NP denotes PHA-activated lymphocytes
C19 857-868 NP denotes lymphocytes
C20 889-892 NP denotes PHA
C21 896-900 NP denotes OKT3
C23 1011-1029 NP denotes vitamin D receptor
C22 996-1029 NP denotes the intestinal vitamin D receptor
C24 1053-1083 NP denotes RNA from activated lymphocytes
C25 1231-1260 NP denotes the human intestinal receptor
C26 1262-1283 NP denotes The amplified product
C27 1353-1382 NP denotes the human intestinal receptor
C28 1455-1466 NP denotes lymphocytes
C30 1593-1611 NP denotes vitamin D receptor
C29 1579-1611 NP denotes the classical vitamin D receptor
R1 C4 C2 coref-other normal human lymphocytes,human lymphocytes
R2 C5 C3 coref-ident this protein,the receptor protein
R3 C7 C1 coref-ident vitamin D receptor,Vitamin D receptor
R4 C10 C8 coref-ident lymphocytes,Lymphocytes
R5 C11 C10 coref-relat that,lymphocytes
R6 C13 C9 coref-other OKT3,the OKT3 antibody
R7 C15 C13 coref-ident OKT3,OKT3
R8 C16 C15 coref-ident OKT3,OKT3
R9 C17 C10 coref-ident lymphocytes,lymphocytes
R10 C18 C14 coref-ident PHA-activated lymphocytes,the PHA-activated cells
R11 C19 C17 coref-ident lymphocytes,lymphocytes
R12 C20 C12 coref-ident PHA,the polyclonal activator phytohemagglutinin (PHA)
R13 C21 C16 coref-ident OKT3,OKT3
R14 C23 C7 coref-ident vitamin D receptor,vitamin D receptor
R15 C25 C22 coref-other the human intestinal receptor,the intestinal vitamin D receptor
R16 C26 C24 coref-other The amplified product,RNA from activated lymphocytes
R17 C27 C25 coref-ident the human intestinal receptor,the human intestinal receptor
R18 C28 C19 coref-ident lymphocytes,lymphocytes
R19 C30 C23 coref-ident vitamin D receptor,vitamin D receptor
R20 C29 C6 coref-ident the classical vitamin D receptor,the classical vitamin D receptor

GENIAcorpus

Id Subject Object Predicate Lexical cue
T1 0-18 protein_family_or_group denotes Vitamin D receptor
T2 33-50 cell_type denotes human lymphocytes
T3 96-109 other_name denotes western blots
T4 114-128 other_name denotes DNA sequencing
T5 176-192 protein_family_or_group denotes receptor protein
T6 197-227 lipid denotes 1 alpha,25-dihydroxyvitamin D3
T7 238-255 cell_type denotes human lymphocytes
T8 300-309 protein_family_or_group denotes classical
T9 310-328 protein_family_or_group denotes vitamin D receptor
T10 344-355 cell_type denotes Lymphocytes
T11 375-388 protein_molecule denotes OKT3 antibody
T12 396-419 protein_molecule denotes T-cell antigen receptor
T13 436-449 cell_component denotes binding sites
T14 465-476 cell_type denotes lymphocytes
T15 504-524 other_name denotes polyclonal activator
T16 525-543 protein_molecule denotes phytohemagglutinin
T17 545-548 protein_molecule denotes PHA
T18 575-579 protein_family_or_group denotes OKT3
T19 584-609 other_organic_compound denotes phorbol myristate acetate
T20 638-651 cell_component denotes binding sites
T21 667-670 protein_molecule denotes PHA
T22 706-710 protein_family_or_group denotes OKT3
T23 715-719 protein_family_or_group denotes OKT3
T24 722-747 other_organic_compound denotes phorbol myristate acetate
T25 747-757 cell_type denotes -activated
T26 758-769 cell_type denotes lymphocytes
T27 801-814 other_organic_compound denotes DNA-cellulose
T28 827-830 protein_molecule denotes PHA
T29 841-852 cell_type denotes lymphocytes
T30 857-868 cell_type denotes lymphocytes
T31 889-892 protein_molecule denotes PHA
T32 896-900 protein_family_or_group denotes OKT3
T33 913-926 cell_type denotes resting cells
T34 931-945 protein_family_or_group denotes 50-kDa species
T35 968-987 protein_family_or_group denotes monoclonal antibody
T36 1000-1010 protein_molecule denotes intestinal
T37 1011-1029 protein_family_or_group denotes vitamin D receptor
T38 1062-1071 cell_type denotes activated
T39 1072-1083 cell_type denotes lymphocytes
T40 1101-1126 other_name denotes polymerase chain reaction
T41 1133-1156 polynucleotide denotes oligonucleotide primers
T42 1170-1195 DNA_domain_or_region denotes 196 base pair long region
T43 1209-1227 protein_domain_or_region denotes DNA-binding domain
T44 1235-1260 protein_molecule denotes human intestinal receptor
T45 1294-1323 DNA_domain_or_region denotes identical nucleotide sequence
T46 1331-1349 protein_domain_or_region denotes DNA-binding domain
T47 1357-1382 protein_molecule denotes human intestinal receptor
T48 1430-1451 protein_family_or_group denotes 1,25-(OH)2D3 receptor
T49 1455-1466 cell_type denotes lymphocytes
T50 1545-1549 RNA_family_or_group denotes mRNA
T51 1583-1592 protein_family_or_group denotes classical
T52 1593-1611 protein_family_or_group denotes vitamin D receptor

mondo_disease

Id Subject Object Predicate Lexical cue mondo_id
T1 545-548 Disease denotes PHA http://purl.obolibrary.org/obo/MONDO_0007710|http://purl.obolibrary.org/obo/MONDO_0008214
T3 667-670 Disease denotes PHA http://purl.obolibrary.org/obo/MONDO_0007710|http://purl.obolibrary.org/obo/MONDO_0008214
T5 827-830 Disease denotes PHA http://purl.obolibrary.org/obo/MONDO_0007710|http://purl.obolibrary.org/obo/MONDO_0008214
T7 889-892 Disease denotes PHA http://purl.obolibrary.org/obo/MONDO_0007710|http://purl.obolibrary.org/obo/MONDO_0008214

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 33-38 OrganismTaxon denotes human 9606
T2 238-243 OrganismTaxon denotes human 9606
T3 1235-1240 OrganismTaxon denotes human 9606
T4 1357-1362 OrganismTaxon denotes human 9606

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 39-50 Body_part denotes lymphocytes http://purl.obolibrary.org/obo/CL_0000542
T2 244-255 Body_part denotes lymphocytes http://purl.obolibrary.org/obo/CL_0000542
T3 344-355 Body_part denotes Lymphocytes http://purl.obolibrary.org/obo/CL_0000542
T4 396-402 Body_part denotes T-cell http://purl.obolibrary.org/obo/CL_0000084
T5 465-476 Body_part denotes lymphocytes http://purl.obolibrary.org/obo/CL_0000542
T6 758-769 Body_part denotes lymphocytes http://purl.obolibrary.org/obo/CL_0000542
T7 841-852 Body_part denotes lymphocytes http://purl.obolibrary.org/obo/CL_0000542
T8 857-868 Body_part denotes lymphocytes http://purl.obolibrary.org/obo/CL_0000542
T9 1072-1083 Body_part denotes lymphocytes http://purl.obolibrary.org/obo/CL_0000542
T10 1455-1466 Body_part denotes lymphocytes http://purl.obolibrary.org/obo/CL_0000542

Anatomy-MAT

Id Subject Object Predicate Lexical cue mat_id
T1 1000-1010 Body_part denotes intestinal http://purl.obolibrary.org/obo/MAT_0000043
T2 1241-1251 Body_part denotes intestinal http://purl.obolibrary.org/obo/MAT_0000043
T3 1363-1373 Body_part denotes intestinal http://purl.obolibrary.org/obo/MAT_0000043

CL-cell

Id Subject Object Predicate Lexical cue cl_id
T1 39-50 Cell denotes lymphocytes http://purl.obolibrary.org/obo/CL:0000542
T2 244-255 Cell denotes lymphocytes http://purl.obolibrary.org/obo/CL:0000542
T3 344-355 Cell denotes Lymphocytes http://purl.obolibrary.org/obo/CL:0000542
T4 396-402 Cell denotes T-cell http://purl.obolibrary.org/obo/CL:0000084
T5 465-476 Cell denotes lymphocytes http://purl.obolibrary.org/obo/CL:0000542
T6 758-769 Cell denotes lymphocytes http://purl.obolibrary.org/obo/CL:0000542
T7 841-852 Cell denotes lymphocytes http://purl.obolibrary.org/obo/CL:0000542
T8 857-868 Cell denotes lymphocytes http://purl.obolibrary.org/obo/CL:0000542
T9 1072-1083 Cell denotes lymphocytes http://purl.obolibrary.org/obo/CL:0000542
T10 1455-1466 Cell denotes lymphocytes http://purl.obolibrary.org/obo/CL:0000542