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PubMed:18408250 JSONTXT

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TEST-DiseaseOrPhenotypicFeature

Id Subject Object Predicate Lexical cue #label
T1 98-118 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis D001172
T2 286-301 DiseaseOrPhenotypicFeature denotes proinflammatory DISEASE
T3 491-510 DiseaseOrPhenotypicFeature denotes autoimmune diseases D001327
T4 595-615 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis D001172
T5 617-619 DiseaseOrPhenotypicFeature denotes RA D001172
T6 870-872 DiseaseOrPhenotypicFeature denotes RA D001172
T7 922-924 DiseaseOrPhenotypicFeature denotes RA D001172
T8 1162-1164 DiseaseOrPhenotypicFeature denotes RA D001172
T9 1387-1389 DiseaseOrPhenotypicFeature denotes RA D001172
T10 1626-1628 DiseaseOrPhenotypicFeature denotes RA D001172
T11 1813-1815 DiseaseOrPhenotypicFeature denotes RA D001172

TEST-ChemicalEntity

Id Subject Object Predicate Lexical cue ID:
T1 991-1014 ChemicalEntity denotes human leukocyte antigen D006680
T2 1016-1019 ChemicalEntity denotes HLA D006680
T3 1033-1040 ChemicalEntity denotes epitope D000939

TEST-OrganismTaxon

Id Subject Object Predicate Lexical cue
T1 856-864 OrganismTaxon denotes patients
T2 908-916 OrganismTaxon denotes patients
T3 991-996 OrganismTaxon denotes human
T4 1291-1299 OrganismTaxon denotes patients
T5 1393-1401 OrganismTaxon denotes patients
T6 1483-1491 OrganismTaxon denotes patients
T7 1881-1889 OrganismTaxon denotes patients

Test-SequenceVariant

Id Subject Object Predicate Lexical cue
T1 1139-1147 SequenceVariant denotes rs729302
T2 1331-1339 SequenceVariant denotes rs729302
T3 1649-1657 SequenceVariant denotes rs729302

Test-GeneOrGeneProduct

Id Subject Object Predicate Lexical cue
T1 40-44 GeneOrGeneProduct denotes IRF5
T2 159-189 GeneOrGeneProduct denotes Interferon regulatory factor 5
T3 191-195 GeneOrGeneProduct denotes IRF5
T4 334-338 GeneOrGeneProduct denotes IRF5
T5 569-573 GeneOrGeneProduct denotes IRF5
T6 757-761 GeneOrGeneProduct denotes IRF5
T7 1021-1025 GeneOrGeneProduct denotes DRB1
T8 1759-1763 GeneOrGeneProduct denotes IRF5

Test-merged-2

Id Subject Object Predicate Lexical cue #label ID:
T80998 1139-1147 SequenceVariant denotes rs729302
T91535 1331-1339 SequenceVariant denotes rs729302
T58481 1649-1657 SequenceVariant denotes rs729302
T4242 991-1014 ChemicalEntity denotes human leukocyte antigen D006680
T4662 1016-1019 ChemicalEntity denotes HLA D006680
T71796 1033-1040 ChemicalEntity denotes epitope D000939
T87495 40-44 GeneOrGeneProduct denotes IRF5
T21374 159-189 GeneOrGeneProduct denotes Interferon regulatory factor 5
T46694 191-195 GeneOrGeneProduct denotes IRF5
T39404 334-338 GeneOrGeneProduct denotes IRF5
T10336 569-573 GeneOrGeneProduct denotes IRF5
T72188 757-761 GeneOrGeneProduct denotes IRF5
T37148 1021-1025 GeneOrGeneProduct denotes DRB1
T68913 1759-1763 GeneOrGeneProduct denotes IRF5
T78159 856-864 OrganismTaxon denotes patients
T95429 908-916 OrganismTaxon denotes patients
T33798 991-996 OrganismTaxon denotes human
T66411 1291-1299 OrganismTaxon denotes patients
T98213 1393-1401 OrganismTaxon denotes patients
T21599 1483-1491 OrganismTaxon denotes patients
T33157 1881-1889 OrganismTaxon denotes patients
T1 98-118 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis D001172
T2 286-301 DiseaseOrPhenotypicFeature denotes proinflammatory DISEASE
T3 491-510 DiseaseOrPhenotypicFeature denotes autoimmune diseases D001327
T4 595-615 DiseaseOrPhenotypicFeature denotes rheumatoid arthritis D001172
T5 617-619 DiseaseOrPhenotypicFeature denotes RA D001172
T6 870-872 DiseaseOrPhenotypicFeature denotes RA D001172
T7 922-924 DiseaseOrPhenotypicFeature denotes RA D001172
T8 1162-1164 DiseaseOrPhenotypicFeature denotes RA D001172
T9 1387-1389 DiseaseOrPhenotypicFeature denotes RA D001172
T10 1626-1628 DiseaseOrPhenotypicFeature denotes RA D001172
T11 1813-1815 DiseaseOrPhenotypicFeature denotes RA D001172

DisGeNET

Id Subject Object Predicate Lexical cue
T0 40-44 gene:3663 denotes IRF5
T1 98-118 disease:C0003873 denotes rheumatoid arthritis
T2 569-573 gene:3663 denotes IRF5
T3 595-615 disease:C0003873 denotes rheumatoid arthritis
T4 569-573 gene:3663 denotes IRF5
T5 617-619 disease:C0003873 denotes RA
T6 1216-1224 gene:128372 denotes OR) 1.22
T7 1162-1164 disease:C0003873 denotes RA
T8 1509-1516 gene:391112 denotes OR 1.11
T9 1387-1389 disease:C0003873 denotes RA
R1 T0 T1 associated_with IRF5,rheumatoid arthritis
R2 T2 T3 associated_with IRF5,rheumatoid arthritis
R3 T4 T5 associated_with IRF5,RA
R4 T6 T7 associated_with OR) 1.22,RA
R5 T8 T9 associated_with OR 1.11,RA

DisGeNET5_variant_disease

Id Subject Object Predicate Lexical cue
18408250-9#99#107#geners729302 1649-1657 geners729302 denotes rs729302
18408250-9#76#78#diseaseC0003873 1626-1628 diseaseC0003873 denotes RA
99#107#geners72930276#78#diseaseC0003873 18408250-9#99#107#geners729302 18408250-9#76#78#diseaseC0003873 associated_with rs729302,RA

DisGeNET5_gene_disease

Id Subject Object Predicate Lexical cue
18408250-0#40#44#gene3663 40-44 gene3663 denotes IRF5
18408250-0#98#118#diseaseC0003873 98-118 diseaseC0003873 denotes rheumatoid arthritis
18408250-2#21#25#gene3663 334-338 gene3663 denotes IRF5
18408250-2#178#197#diseaseC0004364 491-510 diseaseC0004364 denotes autoimmune diseases
40#44#gene366398#118#diseaseC0003873 18408250-0#40#44#gene3663 18408250-0#98#118#diseaseC0003873 associated_with IRF5,rheumatoid arthritis
21#25#gene3663178#197#diseaseC0004364 18408250-2#21#25#gene3663 18408250-2#178#197#diseaseC0004364 associated_with IRF5,autoimmune diseases

tmVarCorpus

Id Subject Object Predicate Lexical cue
T1 1139-1147 SNP:rs729302 denotes rs729302
T2 1331-1339 SNP:rs729302 denotes rs729302
T3 1649-1657 SNP:rs729302 denotes rs729302

PubTator4TogoVar

Id Subject Object Predicate Lexical cue resolved_to
48 1139-1147 SNP denotes rs729302 tmVar:rs729302;VariantGroup:0;RS#:729302
51 1331-1339 SNP denotes rs729302 tmVar:rs729302;VariantGroup:0;RS#:729302
56 1649-1657 SNP denotes rs729302 tmVar:rs729302;VariantGroup:0;RS#:729302

PubTatorOnTogoVar

Id Subject Object Predicate Lexical cue resolved_to
48 1139-1147 SNP denotes rs729302 tmVar:rs729302;VariantGroup:0;RS#:729302
51 1331-1339 SNP denotes rs729302 tmVar:rs729302;VariantGroup:0;RS#:729302
56 1649-1657 SNP denotes rs729302 tmVar:rs729302;VariantGroup:0;RS#:729302
T1 1139-1147 SNP denotes rs729302 tmVar:rs729302;VariantGroup:0;RS#:729302
T2 1331-1339 SNP denotes rs729302 tmVar:rs729302;VariantGroup:0;RS#:729302
T3 1649-1657 SNP denotes rs729302 tmVar:rs729302;VariantGroup:0;RS#:729302