PubMed:1822233 / 409-936 JSON TXT

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sentences

{"project":"sentences","denotations":[{"id":"TextSentencer_T3","span":{"begin":0,"end":527},"obj":"Sentence"},{"id":"T3","span":{"begin":0,"end":527},"obj":"Sentence"},{"id":"T3","span":{"begin":0,"end":527},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"These were: (i) Asx-Asx, hydrogen bonding to the pyranose ring oxygen and anomeric-OH group; (ii) Arg-X-X-X-(Ser/Thr), or the reverse sequence, with the Arg hydrogen bonding to the pyranose ring oxygen; (iii) Lys-(Ser/Thr)-X-X-Asp, or the reverse sequence and with interchange of the Lys-(Ser/Thr) positions, with hydrogen bonding of either or both the Lys and Asp residues to the -OH groups at carbons 2, 3, 4 or 6; (iv) a diaromatic sequence with possible hydrophobic interactions to the faces of the pyranose ring structure."}

GlycoBiology-FMA

{"project":"GlycoBiology-FMA","denotations":[{"id":"_T15","span":{"begin":490,"end":495},"obj":"FMAID:24728"},{"id":"_T16","span":{"begin":490,"end":495},"obj":"FMAID:117356"}],"namespaces":[{"prefix":"FMAID","uri":"http://purl.org/sig/ont/fma/fma"}],"text":"These were: (i) Asx-Asx, hydrogen bonding to the pyranose ring oxygen and anomeric-OH group; (ii) Arg-X-X-X-(Ser/Thr), or the reverse sequence, with the Arg hydrogen bonding to the pyranose ring oxygen; (iii) Lys-(Ser/Thr)-X-X-Asp, or the reverse sequence and with interchange of the Lys-(Ser/Thr) positions, with hydrogen bonding of either or both the Lys and Asp residues to the -OH groups at carbons 2, 3, 4 or 6; (iv) a diaromatic sequence with possible hydrophobic interactions to the faces of the pyranose ring structure."}

uniprot-human

{"project":"uniprot-human","denotations":[{"id":"T2","span":{"begin":94,"end":96},"obj":"http://www.uniprot.org/uniprot/Q8SNA0"}],"text":"These were: (i) Asx-Asx, hydrogen bonding to the pyranose ring oxygen and anomeric-OH group; (ii) Arg-X-X-X-(Ser/Thr), or the reverse sequence, with the Arg hydrogen bonding to the pyranose ring oxygen; (iii) Lys-(Ser/Thr)-X-X-Asp, or the reverse sequence and with interchange of the Lys-(Ser/Thr) positions, with hydrogen bonding of either or both the Lys and Asp residues to the -OH groups at carbons 2, 3, 4 or 6; (iv) a diaromatic sequence with possible hydrophobic interactions to the faces of the pyranose ring structure."}

uniprot-mouse

{"project":"uniprot-mouse","denotations":[{"id":"T1","span":{"begin":94,"end":96},"obj":"http://www.uniprot.org/uniprot/P04441"},{"id":"T2","span":{"begin":490,"end":495},"obj":"http://www.uniprot.org/uniprot/Q920L5"}],"text":"These were: (i) Asx-Asx, hydrogen bonding to the pyranose ring oxygen and anomeric-OH group; (ii) Arg-X-X-X-(Ser/Thr), or the reverse sequence, with the Arg hydrogen bonding to the pyranose ring oxygen; (iii) Lys-(Ser/Thr)-X-X-Asp, or the reverse sequence and with interchange of the Lys-(Ser/Thr) positions, with hydrogen bonding of either or both the Lys and Asp residues to the -OH groups at carbons 2, 3, 4 or 6; (iv) a diaromatic sequence with possible hydrophobic interactions to the faces of the pyranose ring structure."}

GlycoBiology-NCBITAXON

{"project":"GlycoBiology-NCBITAXON","denotations":[{"id":"T3","span":{"begin":86,"end":91},"obj":"http://purl.bioontology.org/ontology/STY/T096"},{"id":"T4","span":{"begin":385,"end":391},"obj":"http://purl.bioontology.org/ontology/STY/T096"},{"id":"T5","span":{"begin":490,"end":495},"obj":"http://purl.bioontology.org/ontology/NCBITAXON/1240355"}],"text":"These were: (i) Asx-Asx, hydrogen bonding to the pyranose ring oxygen and anomeric-OH group; (ii) Arg-X-X-X-(Ser/Thr), or the reverse sequence, with the Arg hydrogen bonding to the pyranose ring oxygen; (iii) Lys-(Ser/Thr)-X-X-Asp, or the reverse sequence and with interchange of the Lys-(Ser/Thr) positions, with hydrogen bonding of either or both the Lys and Asp residues to the -OH groups at carbons 2, 3, 4 or 6; (iv) a diaromatic sequence with possible hydrophobic interactions to the faces of the pyranose ring structure."}

GO-BP

{"project":"GO-BP","denotations":[{"id":"T1","span":{"begin":209,"end":212},"obj":"http://purl.obolibrary.org/obo/GO_0050065"},{"id":"T2","span":{"begin":284,"end":287},"obj":"http://purl.obolibrary.org/obo/GO_0050065"},{"id":"T3","span":{"begin":353,"end":356},"obj":"http://purl.obolibrary.org/obo/GO_0050065"}],"text":"These were: (i) Asx-Asx, hydrogen bonding to the pyranose ring oxygen and anomeric-OH group; (ii) Arg-X-X-X-(Ser/Thr), or the reverse sequence, with the Arg hydrogen bonding to the pyranose ring oxygen; (iii) Lys-(Ser/Thr)-X-X-Asp, or the reverse sequence and with interchange of the Lys-(Ser/Thr) positions, with hydrogen bonding of either or both the Lys and Asp residues to the -OH groups at carbons 2, 3, 4 or 6; (iv) a diaromatic sequence with possible hydrophobic interactions to the faces of the pyranose ring structure."}

GO-CC

{"project":"GO-CC","denotations":[{"id":"T1","span":{"begin":109,"end":112},"obj":"http://purl.obolibrary.org/obo/GO_0005790"},{"id":"T2","span":{"begin":214,"end":217},"obj":"http://purl.obolibrary.org/obo/GO_0005790"},{"id":"T3","span":{"begin":289,"end":292},"obj":"http://purl.obolibrary.org/obo/GO_0005790"}],"text":"These were: (i) Asx-Asx, hydrogen bonding to the pyranose ring oxygen and anomeric-OH group; (ii) Arg-X-X-X-(Ser/Thr), or the reverse sequence, with the Arg hydrogen bonding to the pyranose ring oxygen; (iii) Lys-(Ser/Thr)-X-X-Asp, or the reverse sequence and with interchange of the Lys-(Ser/Thr) positions, with hydrogen bonding of either or both the Lys and Asp residues to the -OH groups at carbons 2, 3, 4 or 6; (iv) a diaromatic sequence with possible hydrophobic interactions to the faces of the pyranose ring structure."}

UBERON-AE

{"project":"UBERON-AE","denotations":[{"id":"T1","span":{"begin":490,"end":495},"obj":"http://purl.obolibrary.org/obo/UBERON_0001456"}],"text":"These were: (i) Asx-Asx, hydrogen bonding to the pyranose ring oxygen and anomeric-OH group; (ii) Arg-X-X-X-(Ser/Thr), or the reverse sequence, with the Arg hydrogen bonding to the pyranose ring oxygen; (iii) Lys-(Ser/Thr)-X-X-Asp, or the reverse sequence and with interchange of the Lys-(Ser/Thr) positions, with hydrogen bonding of either or both the Lys and Asp residues to the -OH groups at carbons 2, 3, 4 or 6; (iv) a diaromatic sequence with possible hydrophobic interactions to the faces of the pyranose ring structure."}

EDAM-topics

{"project":"EDAM-topics","denotations":[{"id":"T14","span":{"begin":134,"end":142},"obj":"http://edamontology.org/topic_3168"},{"id":"T15","span":{"begin":134,"end":142},"obj":"http://edamontology.org/topic_0080"},{"id":"T16","span":{"begin":247,"end":255},"obj":"http://edamontology.org/topic_3168"},{"id":"T17","span":{"begin":247,"end":255},"obj":"http://edamontology.org/topic_0080"},{"id":"T18","span":{"begin":435,"end":443},"obj":"http://edamontology.org/topic_0080"},{"id":"T19","span":{"begin":435,"end":443},"obj":"http://edamontology.org/topic_3168"},{"id":"T20","span":{"begin":470,"end":482},"obj":"http://edamontology.org/topic_0602"}],"text":"These were: (i) Asx-Asx, hydrogen bonding to the pyranose ring oxygen and anomeric-OH group; (ii) Arg-X-X-X-(Ser/Thr), or the reverse sequence, with the Arg hydrogen bonding to the pyranose ring oxygen; (iii) Lys-(Ser/Thr)-X-X-Asp, or the reverse sequence and with interchange of the Lys-(Ser/Thr) positions, with hydrogen bonding of either or both the Lys and Asp residues to the -OH groups at carbons 2, 3, 4 or 6; (iv) a diaromatic sequence with possible hydrophobic interactions to the faces of the pyranose ring structure."}

EDAM-DFO

{"project":"EDAM-DFO","denotations":[{"id":"T13","span":{"begin":134,"end":142},"obj":"http://edamontology.org/data_2044"},{"id":"T14","span":{"begin":134,"end":142},"obj":"http://edamontology.org/operation_3218"},{"id":"T15","span":{"begin":247,"end":255},"obj":"http://edamontology.org/data_2044"},{"id":"T16","span":{"begin":247,"end":255},"obj":"http://edamontology.org/operation_3218"},{"id":"T17","span":{"begin":365,"end":373},"obj":"http://edamontology.org/data_1756"},{"id":"T18","span":{"begin":435,"end":443},"obj":"http://edamontology.org/data_2044"},{"id":"T19","span":{"begin":435,"end":443},"obj":"http://edamontology.org/operation_3218"},{"id":"T20","span":{"begin":435,"end":448},"obj":"http://edamontology.org/data_2136"},{"id":"T21","span":{"begin":517,"end":526},"obj":"http://edamontology.org/data_0883"}],"text":"These were: (i) Asx-Asx, hydrogen bonding to the pyranose ring oxygen and anomeric-OH group; (ii) Arg-X-X-X-(Ser/Thr), or the reverse sequence, with the Arg hydrogen bonding to the pyranose ring oxygen; (iii) Lys-(Ser/Thr)-X-X-Asp, or the reverse sequence and with interchange of the Lys-(Ser/Thr) positions, with hydrogen bonding of either or both the Lys and Asp residues to the -OH groups at carbons 2, 3, 4 or 6; (iv) a diaromatic sequence with possible hydrophobic interactions to the faces of the pyranose ring structure."}

GlyTouCan-IUPAC

performance-test

{"project":"performance-test","denotations":[{"id":"PD-UBERON-AE-B_T1","span":{"begin":490,"end":495},"obj":"http://purl.obolibrary.org/obo/UBERON_0001456"}],"text":"These were: (i) Asx-Asx, hydrogen bonding to the pyranose ring oxygen and anomeric-OH group; (ii) Arg-X-X-X-(Ser/Thr), or the reverse sequence, with the Arg hydrogen bonding to the pyranose ring oxygen; (iii) Lys-(Ser/Thr)-X-X-Asp, or the reverse sequence and with interchange of the Lys-(Ser/Thr) positions, with hydrogen bonding of either or both the Lys and Asp residues to the -OH groups at carbons 2, 3, 4 or 6; (iv) a diaromatic sequence with possible hydrophobic interactions to the faces of the pyranose ring structure."}

sentences

GlyCosmos15-Sentences

{"project":"GlyCosmos15-Sentences","blocks":[{"id":"T3","span":{"begin":0,"end":527},"obj":"Sentence"}],"text":"These were: (i) Asx-Asx, hydrogen bonding to the pyranose ring oxygen and anomeric-OH group; (ii) Arg-X-X-X-(Ser/Thr), or the reverse sequence, with the Arg hydrogen bonding to the pyranose ring oxygen; (iii) Lys-(Ser/Thr)-X-X-Asp, or the reverse sequence and with interchange of the Lys-(Ser/Thr) positions, with hydrogen bonding of either or both the Lys and Asp residues to the -OH groups at carbons 2, 3, 4 or 6; (iv) a diaromatic sequence with possible hydrophobic interactions to the faces of the pyranose ring structure."}

PubMed:1822233 / 409-936 JSONTXT

Annnotations TAB JSON ListView MergeView

PubMed:1822233 / 409-936 JSON TXT