PubMed:1794037
Annnotations
CL-cell
| Id | Subject | Object | Predicate | Lexical cue | cl_id |
|---|---|---|---|---|---|
| T1 | 580-596 | Cell | denotes | mesenchyme cells | http://purl.obolibrary.org/obo/CL:0008019 |
| T2 | 619-633 | Cell | denotes | ectoderm cells | http://purl.obolibrary.org/obo/CL:0000221 |
| T3 | 966-981 | Cell | denotes | mesenchyme cell | http://purl.obolibrary.org/obo/CL:0008019 |
Glycan-Motif
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 106-115 | https://glytoucan.org/Structures/Glycans/G65889KE | denotes | galactose |
| T2 | 106-115 | https://glytoucan.org/Structures/Glycans/G68158BT | denotes | galactose |
| T3 | 313-322 | https://glytoucan.org/Structures/Glycans/G65889KE | denotes | galactose |
| T4 | 313-322 | https://glytoucan.org/Structures/Glycans/G68158BT | denotes | galactose |
GlyCosmos6-Glycan-Motif-Image
| Id | Subject | Object | Predicate | Lexical cue | image |
|---|---|---|---|---|---|
| T1 | 106-115 | Glycan_Motif | denotes | galactose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE |
| T3 | 313-322 | Glycan_Motif | denotes | galactose | https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G68158BT|https://api.glycosmos.org/wurcs2image/0.10.0/png/binary/G65889KE |
GlyCosmos6-Glycan-Motif-Structure
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 106-115 | https://glytoucan.org/Structures/Glycans/G65889KE | denotes | galactose |
| T2 | 106-115 | https://glytoucan.org/Structures/Glycans/G68158BT | denotes | galactose |
| T3 | 313-322 | https://glytoucan.org/Structures/Glycans/G65889KE | denotes | galactose |
| T4 | 313-322 | https://glytoucan.org/Structures/Glycans/G68158BT | denotes | galactose |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| TextSentencer_T1 | 0-141 | Sentence | denotes | The structure and activities of echinonectin: a developmentally regulated cell adhesion glycoprotein with galactose-specific lectin activity. |
| TextSentencer_T2 | 142-262 | Sentence | denotes | The extracellular matrix of the sea urchin embryo contains a 230 kD homodimeric glycoprotein known as echinonectin (EN). |
| TextSentencer_T3 | 263-348 | Sentence | denotes | EN contains a cell attachment domain as well as a galactose-specific lectin activity. |
| TextSentencer_T4 | 349-465 | Sentence | denotes | Cell attachment to EN is differentially regulated in the three primary germ layers, endoderm, ectoderm and mesoderm. |
| TextSentencer_T5 | 466-756 | Sentence | denotes | Prior to gastrulation all embryonic cells adhere equally to EN-coated substrates, but during gastrulation primary mesenchyme cells lose affinity for EN, ectoderm cells increase their binding to the molecule, and cells of the endoderm maintain a similar or slightly lowered level of binding. |
| TextSentencer_T6 | 757-887 | Sentence | denotes | The mechanisms governing these adhesive changes and the specific functions they serve in development are not currently understood. |
| TextSentencer_T7 | 888-1117 | Sentence | denotes | They are timed to coincide with distinct morphogenetic events such as primary mesenchyme cell ingression and archenteron formation, suggesting that regulated adhesion to EN plays at least a permissive role in early morphogenesis. |
| T1 | 0-141 | Sentence | denotes | The structure and activities of echinonectin: a developmentally regulated cell adhesion glycoprotein with galactose-specific lectin activity. |
| T2 | 142-262 | Sentence | denotes | The extracellular matrix of the sea urchin embryo contains a 230 kD homodimeric glycoprotein known as echinonectin (EN). |
| T3 | 263-348 | Sentence | denotes | EN contains a cell attachment domain as well as a galactose-specific lectin activity. |
| T4 | 349-465 | Sentence | denotes | Cell attachment to EN is differentially regulated in the three primary germ layers, endoderm, ectoderm and mesoderm. |
| T5 | 466-756 | Sentence | denotes | Prior to gastrulation all embryonic cells adhere equally to EN-coated substrates, but during gastrulation primary mesenchyme cells lose affinity for EN, ectoderm cells increase their binding to the molecule, and cells of the endoderm maintain a similar or slightly lowered level of binding. |
| T6 | 757-887 | Sentence | denotes | The mechanisms governing these adhesive changes and the specific functions they serve in development are not currently understood. |
| T7 | 888-1117 | Sentence | denotes | They are timed to coincide with distinct morphogenetic events such as primary mesenchyme cell ingression and archenteron formation, suggesting that regulated adhesion to EN plays at least a permissive role in early morphogenesis. |
| T1 | 0-141 | Sentence | denotes | The structure and activities of echinonectin: a developmentally regulated cell adhesion glycoprotein with galactose-specific lectin activity. |
| T2 | 142-262 | Sentence | denotes | The extracellular matrix of the sea urchin embryo contains a 230 kD homodimeric glycoprotein known as echinonectin (EN). |
| T3 | 263-348 | Sentence | denotes | EN contains a cell attachment domain as well as a galactose-specific lectin activity. |
| T4 | 349-465 | Sentence | denotes | Cell attachment to EN is differentially regulated in the three primary germ layers, endoderm, ectoderm and mesoderm. |
| T5 | 466-756 | Sentence | denotes | Prior to gastrulation all embryonic cells adhere equally to EN-coated substrates, but during gastrulation primary mesenchyme cells lose affinity for EN, ectoderm cells increase their binding to the molecule, and cells of the endoderm maintain a similar or slightly lowered level of binding. |
| T6 | 757-887 | Sentence | denotes | The mechanisms governing these adhesive changes and the specific functions they serve in development are not currently understood. |
| T7 | 888-1117 | Sentence | denotes | They are timed to coincide with distinct morphogenetic events such as primary mesenchyme cell ingression and archenteron formation, suggesting that regulated adhesion to EN plays at least a permissive role in early morphogenesis. |
Glycosmos6-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 185-191 | http://purl.obolibrary.org/obo/MAT_0000226 | denotes | embryo |
| T2 | 433-441 | http://purl.obolibrary.org/obo/MAT_0000175 | denotes | endoderm |
| T3 | 443-451 | http://purl.obolibrary.org/obo/MAT_0000173 | denotes | ectoderm |
| T4 | 443-451 | http://purl.obolibrary.org/obo/MAT_0000155 | denotes | ectoderm |
| T5 | 456-464 | http://purl.obolibrary.org/obo/MAT_0000174 | denotes | mesoderm |
| T6 | 475-487 | http://purl.obolibrary.org/obo/MAT_0000179 | denotes | gastrulation |
| T7 | 559-571 | http://purl.obolibrary.org/obo/MAT_0000179 | denotes | gastrulation |
| T8 | 619-627 | http://purl.obolibrary.org/obo/MAT_0000173 | denotes | ectoderm |
| T9 | 619-627 | http://purl.obolibrary.org/obo/MAT_0000155 | denotes | ectoderm |
| T10 | 691-699 | http://purl.obolibrary.org/obo/MAT_0000175 | denotes | endoderm |
GlycoBiology-FMA
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| _T1 | 88-100 | FMAID:167256 | denotes | glycoprotein |
| _T2 | 88-100 | FMAID:62925 | denotes | glycoprotein |
| _T3 | 106-115 | FMAID:196789 | denotes | galactose |
| _T4 | 106-115 | FMAID:82794 | denotes | galactose |
| _T5 | 146-166 | FMAID:265717 | denotes | extracellular matrix |
| _T6 | 146-166 | FMAID:165194 | denotes | extracellular matrix |
| _T7 | 185-191 | FMAID:69068 | denotes | embryo |
| _T8 | 185-191 | FMAID:169646 | denotes | embryo |
| _T9 | 222-234 | FMAID:167256 | denotes | glycoprotein |
| _T10 | 222-234 | FMAID:62925 | denotes | glycoprotein |
| _T11 | 313-322 | FMAID:82794 | denotes | galactose |
| _T12 | 313-322 | FMAID:196789 | denotes | galactose |
| _T13 | 420-431 | FMAID:169648 | denotes | germ layers |
| _T14 | 433-441 | FMAID:69071 | denotes | endoderm |
| _T15 | 433-441 | FMAID:169650 | denotes | endoderm |
| _T16 | 443-451 | FMAID:69070 | denotes | ectoderm |
| _T17 | 443-451 | FMAID:169649 | denotes | ectoderm |
| _T18 | 456-464 | FMAID:69072 | denotes | mesoderm |
| _T19 | 456-464 | FMAID:169651 | denotes | mesoderm |
| _T20 | 492-507 | FMAID:196839 | denotes | embryonic cells |
| _T21 | 492-507 | FMAID:82840 | denotes | embryonic cells |
| _T22 | 502-507 | FMAID:169002 | denotes | cells |
| _T23 | 502-507 | FMAID:68646 | denotes | cells |
| _T24 | 580-596 | FMAID:70546 | denotes | mesenchyme cells |
| _T25 | 580-596 | FMAID:171387 | denotes | mesenchyme cells |
| _T26 | 591-596 | FMAID:169002 | denotes | cells |
| _T27 | 591-596 | FMAID:68646 | denotes | cells |
| _T28 | 619-627 | FMAID:169649 | denotes | ectoderm |
| _T29 | 619-627 | FMAID:69070 | denotes | ectoderm |
| _T30 | 619-633 | FMAID:200954 | denotes | ectoderm cells |
| _T31 | 619-633 | FMAID:72549 | denotes | ectoderm cells |
| _T32 | 619-633 | FMAID:174558 | denotes | ectoderm cells |
| _T33 | 628-633 | FMAID:68646 | denotes | cells |
| _T34 | 628-633 | FMAID:169002 | denotes | cells |
| _T35 | 674-683 | FMAID:200932 | denotes | and cells |
| _T36 | 674-683 | FMAID:86471 | denotes | and cells |
| _T37 | 678-683 | FMAID:169002 | denotes | cells |
| _T38 | 678-683 | FMAID:68646 | denotes | cells |
| _T39 | 691-699 | FMAID:169650 | denotes | endoderm |
| _T40 | 691-699 | FMAID:69071 | denotes | endoderm |
| _T41 | 700-708 | FMAID:214734 | denotes | maintain |
| _T42 | 966-981 | FMAID:171387 | denotes | mesenchyme cell |
| _T43 | 966-981 | FMAID:70546 | denotes | mesenchyme cell |
uniprot-human
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 74-100 | http://www.uniprot.org/uniprot/Q0VAQ4 | denotes | cell adhesion glycoprotein |
GlycoBiology-NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 502-507 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T2 | 591-596 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T3 | 628-633 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T4 | 678-683 | http://purl.bioontology.org/ontology/STY/T025 | denotes | cells |
| T5 | 761-771 | http://purl.bioontology.org/ontology/NCBITAXON/127244 | denotes | mechanisms |
| T6 | 943-949 | http://purl.bioontology.org/ontology/STY/T051 | denotes | events |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 64-73 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulated |
| T2 | 389-398 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulated |
| T3 | 1036-1045 | http://purl.obolibrary.org/obo/GO_0065007 | denotes | regulated |
| T4 | 64-87 | http://purl.obolibrary.org/obo/GO_0007162 | denotes | regulated cell adhesion |
| T5 | 64-87 | http://purl.obolibrary.org/obo/GO_0010810 | denotes | regulated cell adhesion |
| T6 | 64-87 | http://purl.obolibrary.org/obo/GO_0022407 | denotes | regulated cell adhesion |
| T7 | 64-87 | http://purl.obolibrary.org/obo/GO_0045785 | denotes | regulated cell adhesion |
| T8 | 64-87 | http://purl.obolibrary.org/obo/GO_1903037 | denotes | regulated cell adhesion |
| T9 | 64-87 | http://purl.obolibrary.org/obo/GO_0001952 | denotes | regulated cell adhesion |
| T10 | 74-87 | http://purl.obolibrary.org/obo/GO_0007155 | denotes | cell adhesion |
| T11 | 132-166 | http://purl.obolibrary.org/obo/GO_1901203 | denotes | activity. The extracellular matrix |
| T12 | 132-166 | http://purl.obolibrary.org/obo/GO_1903055 | denotes | activity. The extracellular matrix |
| T13 | 339-353 | http://purl.obolibrary.org/obo/GO_0001775 | denotes | activity. Cell |
| T14 | 475-487 | http://purl.obolibrary.org/obo/GO_0007369 | denotes | gastrulation |
| T15 | 559-571 | http://purl.obolibrary.org/obo/GO_0007369 | denotes | gastrulation |
| T16 | 846-857 | http://purl.obolibrary.org/obo/GO_0032502 | denotes | development |
| T17 | 1009-1018 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | formation |
| T18 | 1103-1116 | http://purl.obolibrary.org/obo/GO_0009653 | denotes | morphogenesis |
GO-MF
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 649-656 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
| T2 | 748-755 | http://purl.obolibrary.org/obo/GO_0070026 | denotes | binding |
| T3 | 649-656 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
| T4 | 748-755 | http://purl.obolibrary.org/obo/GO_0003680 | denotes | binding |
| T5 | 649-656 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
| T6 | 748-755 | http://purl.obolibrary.org/obo/GO_0017091 | denotes | binding |
| T7 | 649-656 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
| T8 | 748-755 | http://purl.obolibrary.org/obo/GO_0005488 | denotes | binding |
GO-CC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 74-78 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T2 | 277-281 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
| T3 | 349-353 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | Cell |
| T4 | 502-507 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T5 | 591-596 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T6 | 628-633 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T7 | 678-683 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
| T8 | 146-159 | http://purl.obolibrary.org/obo/GO_0005576 | denotes | extracellular |
| T9 | 146-166 | http://purl.obolibrary.org/obo/GO_0031012 | denotes | extracellular matrix |
UBERON-AE
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 185-191 | http://purl.obolibrary.org/obo/UBERON_0000922 | denotes | embryo |
| T2 | 420-431 | http://purl.obolibrary.org/obo/UBERON_0000923 | denotes | germ layers |
| T3 | 433-441 | http://purl.obolibrary.org/obo/UBERON_0000925 | denotes | endoderm |
| T4 | 691-699 | http://purl.obolibrary.org/obo/UBERON_0000925 | denotes | endoderm |
| T5 | 443-451 | http://purl.obolibrary.org/obo/UBERON_0000924 | denotes | ectoderm |
| T6 | 619-627 | http://purl.obolibrary.org/obo/UBERON_0000924 | denotes | ectoderm |
| T7 | 456-464 | http://purl.obolibrary.org/obo/UBERON_0000926 | denotes | mesoderm |
| T8 | 580-590 | http://purl.obolibrary.org/obo/UBERON_0003104 | denotes | mesenchyme |
| T9 | 966-976 | http://purl.obolibrary.org/obo/UBERON_0003104 | denotes | mesenchyme |
| T10 | 997-1008 | http://purl.obolibrary.org/obo/UBERON_0004735 | denotes | archenteron |
EDAM-topics
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 664-672 | http://edamontology.org/topic_2839 | denotes | molecule |
EDAM-DFO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 4-13 | http://edamontology.org/data_0883 | denotes | structure |
| T2 | 160-166 | http://edamontology.org/data_2082 | denotes | matrix |
| T3 | 822-831 | http://edamontology.org/operation_0004 | denotes | functions |
| T4 | 1009-1018 | http://edamontology.org/format_1915 | denotes | formation |
| T5 | 1009-1018 | http://edamontology.org/operation_0335 | denotes | formation |
GlycoBiology-MAT
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 185-191 | http://purl.obolibrary.org/obo/MAT_0000226 | denotes | embryo |
| T2 | 433-441 | http://purl.obolibrary.org/obo/MAT_0000175 | denotes | endoderm |
| T3 | 443-451 | http://purl.obolibrary.org/obo/MAT_0000155 | denotes | ectoderm |
| T4 | 443-451 | http://purl.obolibrary.org/obo/MAT_0000173 | denotes | ectoderm |
| T5 | 456-464 | http://purl.obolibrary.org/obo/MAT_0000174 | denotes | mesoderm |
| T6 | 475-487 | http://purl.obolibrary.org/obo/MAT_0000179 | denotes | gastrulation |
| T7 | 559-571 | http://purl.obolibrary.org/obo/MAT_0000179 | denotes | gastrulation |
| T8 | 619-627 | http://purl.obolibrary.org/obo/MAT_0000155 | denotes | ectoderm |
| T9 | 619-627 | http://purl.obolibrary.org/obo/MAT_0000173 | denotes | ectoderm |
| T10 | 691-699 | http://purl.obolibrary.org/obo/MAT_0000175 | denotes | endoderm |
GlyTouCan-IUPAC
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| GlycanIUPAC_T1 | 488-491 | "http://rdf.glycoinfo.org/glycan/G41652MJ" | denotes | all |
| GlycanIUPAC_T2 | 488-491 | "http://rdf.glycoinfo.org/glycan/G20761YC" | denotes | all |
| GlycanIUPAC_T3 | 488-491 | "http://rdf.glycoinfo.org/glycan/G19807HM" | denotes | all |
| GlycanIUPAC_T4 | 488-491 | "http://rdf.glycoinfo.org/glycan/G20351TE" | denotes | all |
| GlycanIUPAC_T5 | 488-491 | "http://rdf.glycoinfo.org/glycan/G71957MR" | denotes | all |
| GlycanIUPAC_T6 | 488-491 | "http://rdf.glycoinfo.org/glycan/G59040AE" | denotes | all |
| GlycanIUPAC_T7 | 488-491 | "http://rdf.glycoinfo.org/glycan/G14987PW" | denotes | all |
| GlycanIUPAC_T8 | 488-491 | "http://rdf.glycoinfo.org/glycan/G95064PC" | denotes | all |
| GlycanIUPAC_T9 | 488-491 | "http://rdf.glycoinfo.org/glycan/G39143AQ" | denotes | all |
| GlycanIUPAC_T10 | 488-491 | "http://rdf.glycoinfo.org/glycan/G65149OO" | denotes | all |
| GlycanIUPAC_T11 | 488-491 | "http://rdf.glycoinfo.org/glycan/G02766SY" | denotes | all |
| GlycanIUPAC_T12 | 488-491 | "http://rdf.glycoinfo.org/glycan/G26019KJ" | denotes | all |
| GlycanIUPAC_T13 | 488-491 | "http://rdf.glycoinfo.org/glycan/G36429CZ" | denotes | all |
| GlycanIUPAC_T14 | 488-491 | "http://rdf.glycoinfo.org/glycan/G89633TP" | denotes | all |
| GlycanIUPAC_T15 | 488-491 | "http://rdf.glycoinfo.org/glycan/G28494FO" | denotes | all |
| GlycanIUPAC_T16 | 488-491 | "http://rdf.glycoinfo.org/glycan/G06219CP" | denotes | all |
| GlycanIUPAC_T17 | 488-491 | "http://rdf.glycoinfo.org/glycan/G44237SM" | denotes | all |
| GlycanIUPAC_T18 | 488-491 | "http://rdf.glycoinfo.org/glycan/G57948RL" | denotes | all |
| GlycanIUPAC_T19 | 488-491 | "http://rdf.glycoinfo.org/glycan/G64016DN" | denotes | all |
| GlycanIUPAC_T20 | 488-491 | "http://rdf.glycoinfo.org/glycan/G14536PC" | denotes | all |
| GlycanIUPAC_T21 | 488-491 | "http://rdf.glycoinfo.org/glycan/G14356FW" | denotes | all |
| GlycanIUPAC_T22 | 488-491 | "http://rdf.glycoinfo.org/glycan/G34565UO" | denotes | all |
| GlycanIUPAC_T23 | 488-491 | "http://rdf.glycoinfo.org/glycan/G67124MW" | denotes | all |
| GlycanIUPAC_T24 | 488-491 | "http://rdf.glycoinfo.org/glycan/G71457ZU" | denotes | all |
| GlycanIUPAC_T25 | 488-491 | "http://rdf.glycoinfo.org/glycan/G55228VZ" | denotes | all |
| GlycanIUPAC_T26 | 488-491 | "http://rdf.glycoinfo.org/glycan/G31034MJ" | denotes | all |
| GlycanIUPAC_T27 | 488-491 | "http://rdf.glycoinfo.org/glycan/G25776IP" | denotes | all |
| GlycanIUPAC_T28 | 488-491 | "http://rdf.glycoinfo.org/glycan/G64442BV" | denotes | all |
| GlycanIUPAC_T29 | 488-491 | "http://rdf.glycoinfo.org/glycan/G57018LE" | denotes | all |
| GlycanIUPAC_T30 | 488-491 | "http://rdf.glycoinfo.org/glycan/G61761GX" | denotes | all |
| GlycanIUPAC_T31 | 488-491 | "http://rdf.glycoinfo.org/glycan/G76318UX" | denotes | all |
| GlycanIUPAC_T32 | 488-491 | "http://rdf.glycoinfo.org/glycan/G61906ER" | denotes | all |
| GlycanIUPAC_T33 | 488-491 | "http://rdf.glycoinfo.org/glycan/G68723GR" | denotes | all |
| GlycanIUPAC_T34 | 488-491 | "http://rdf.glycoinfo.org/glycan/G19540LE" | denotes | all |
| GlycanIUPAC_T35 | 488-491 | "http://rdf.glycoinfo.org/glycan/G74944PO" | denotes | all |
| GlycanIUPAC_T36 | 488-491 | "http://rdf.glycoinfo.org/glycan/G89489ZJ" | denotes | all |
| GlycanIUPAC_T37 | 488-491 | "http://rdf.glycoinfo.org/glycan/G04434YU" | denotes | all |
| GlycanIUPAC_T38 | 488-491 | "http://rdf.glycoinfo.org/glycan/G21450PB" | denotes | all |
| GlycanIUPAC_T39 | 488-491 | "http://rdf.glycoinfo.org/glycan/G93629QY" | denotes | all |
| GlycanIUPAC_T40 | 488-491 | "http://rdf.glycoinfo.org/glycan/G02603TR" | denotes | all |
| GlycanIUPAC_T41 | 488-491 | "http://rdf.glycoinfo.org/glycan/G40280JP" | denotes | all |
| GlycanIUPAC_T42 | 488-491 | "http://rdf.glycoinfo.org/glycan/G95259IC" | denotes | all |
| GlycanIUPAC_T43 | 488-491 | "http://rdf.glycoinfo.org/glycan/G26900FE" | denotes | all |
| GlycanIUPAC_T44 | 488-491 | "http://rdf.glycoinfo.org/glycan/G21346KK" | denotes | all |
| GlycanIUPAC_T45 | 488-491 | "http://rdf.glycoinfo.org/glycan/G62509FF" | denotes | all |
| GlycanIUPAC_T46 | 488-491 | "http://rdf.glycoinfo.org/glycan/G83932AK" | denotes | all |
| GlycanIUPAC_T47 | 488-491 | "http://rdf.glycoinfo.org/glycan/G96978IB" | denotes | all |
| GlycanIUPAC_T48 | 488-491 | "http://rdf.glycoinfo.org/glycan/G34275DN" | denotes | all |
| GlycanIUPAC_T49 | 488-491 | "http://rdf.glycoinfo.org/glycan/G07071JF" | denotes | all |
| GlycanIUPAC_T50 | 488-491 | "http://rdf.glycoinfo.org/glycan/G80639QD" | denotes | all |
| GlycanIUPAC_T51 | 488-491 | "http://rdf.glycoinfo.org/glycan/G99460PJ" | denotes | all |
| GlycanIUPAC_T52 | 488-491 | "http://rdf.glycoinfo.org/glycan/G22024BZ" | denotes | all |
| GlycanIUPAC_T53 | 488-491 | "http://rdf.glycoinfo.org/glycan/G74097ZY" | denotes | all |
| GlycanIUPAC_T54 | 488-491 | "http://rdf.glycoinfo.org/glycan/G84439YP" | denotes | all |
| GlycanIUPAC_T55 | 488-491 | "http://rdf.glycoinfo.org/glycan/G52207WQ" | denotes | all |
| GlycanIUPAC_T56 | 488-491 | "http://rdf.glycoinfo.org/glycan/G90695MS" | denotes | all |
| GlycanIUPAC_T57 | 488-491 | "http://rdf.glycoinfo.org/glycan/G50398QX" | denotes | all |
| GlycanIUPAC_T58 | 488-491 | "http://rdf.glycoinfo.org/glycan/G12166ZT" | denotes | all |
| GlycanIUPAC_T59 | 488-491 | "http://rdf.glycoinfo.org/glycan/G48368BR" | denotes | all |
| GlycanIUPAC_T60 | 488-491 | "http://rdf.glycoinfo.org/glycan/G57407RW" | denotes | all |
| GlycanIUPAC_T61 | 488-491 | "http://rdf.glycoinfo.org/glycan/G00386TY" | denotes | all |
| GlycanIUPAC_T62 | 488-491 | "http://rdf.glycoinfo.org/glycan/G18723JK" | denotes | all |
| GlycanIUPAC_T63 | 488-491 | "http://rdf.glycoinfo.org/glycan/G93757OR" | denotes | all |
| GlycanIUPAC_T64 | 488-491 | "http://rdf.glycoinfo.org/glycan/G29006SI" | denotes | all |
| GlycanIUPAC_T65 | 488-491 | "http://rdf.glycoinfo.org/glycan/G03099OQ" | denotes | all |
| GlycanIUPAC_T66 | 488-491 | "http://rdf.glycoinfo.org/glycan/G53739OW" | denotes | all |
| GlycanIUPAC_T67 | 488-491 | "http://rdf.glycoinfo.org/glycan/G70440ZO" | denotes | all |
| GlycanIUPAC_T68 | 488-491 | "http://rdf.glycoinfo.org/glycan/G29951RR" | denotes | all |
| GlycanIUPAC_T69 | 488-491 | "http://rdf.glycoinfo.org/glycan/G58402TI" | denotes | all |
| GlycanIUPAC_T70 | 488-491 | "http://rdf.glycoinfo.org/glycan/G39875TP" | denotes | all |
| GlycanIUPAC_T71 | 488-491 | "http://rdf.glycoinfo.org/glycan/G83439QV" | denotes | all |
| GlycanIUPAC_T72 | 488-491 | "http://rdf.glycoinfo.org/glycan/G41762RC" | denotes | all |
| GlycanIUPAC_T73 | 488-491 | "http://rdf.glycoinfo.org/glycan/G91604UI" | denotes | all |
| GlycanIUPAC_T74 | 488-491 | "http://rdf.glycoinfo.org/glycan/G88447WE" | denotes | all |
| GlycanIUPAC_T75 | 488-491 | "http://rdf.glycoinfo.org/glycan/G93634BS" | denotes | all |
| GlycanIUPAC_T76 | 488-491 | "http://rdf.glycoinfo.org/glycan/G02587BH" | denotes | all |
| GlycanIUPAC_T77 | 488-491 | "http://rdf.glycoinfo.org/glycan/G43511MX" | denotes | all |
| GlycanIUPAC_T78 | 488-491 | "http://rdf.glycoinfo.org/glycan/G64958DH" | denotes | all |
| GlycanIUPAC_T79 | 488-491 | "http://rdf.glycoinfo.org/glycan/G30384TR" | denotes | all |
| GlycanIUPAC_T80 | 488-491 | "http://rdf.glycoinfo.org/glycan/G15624EX" | denotes | all |
| GlycanIUPAC_T81 | 488-491 | "http://rdf.glycoinfo.org/glycan/G22706ST" | denotes | all |
| GlycanIUPAC_T82 | 488-491 | "http://rdf.glycoinfo.org/glycan/G57408PI" | denotes | all |
| GlycanIUPAC_T83 | 488-491 | "http://rdf.glycoinfo.org/glycan/G86403XX" | denotes | all |
| GlycanIUPAC_T84 | 488-491 | "http://rdf.glycoinfo.org/glycan/G78043YB" | denotes | all |
| GlycanIUPAC_T85 | 488-491 | "http://rdf.glycoinfo.org/glycan/G18952JK" | denotes | all |
| GlycanIUPAC_T86 | 488-491 | "http://rdf.glycoinfo.org/glycan/G49020ND" | denotes | all |
| GlycanIUPAC_T87 | 488-491 | "http://rdf.glycoinfo.org/glycan/G63590YW" | denotes | all |
| GlycanIUPAC_T88 | 488-491 | "http://rdf.glycoinfo.org/glycan/G22793KS" | denotes | all |
| GlycanIUPAC_T89 | 488-491 | "http://rdf.glycoinfo.org/glycan/G64134SS" | denotes | all |
| GlycanIUPAC_T90 | 488-491 | "http://rdf.glycoinfo.org/glycan/G17338HY" | denotes | all |
| GlycanIUPAC_T91 | 488-491 | "http://rdf.glycoinfo.org/glycan/G99745XF" | denotes | all |
| GlycanIUPAC_T92 | 488-491 | "http://rdf.glycoinfo.org/glycan/G27782HN" | denotes | all |
| GlycanIUPAC_T93 | 488-491 | "http://rdf.glycoinfo.org/glycan/G57496DC" | denotes | all |
| GlycanIUPAC_T94 | 488-491 | "http://rdf.glycoinfo.org/glycan/G93169WB" | denotes | all |
| GlycanIUPAC_T95 | 488-491 | "http://rdf.glycoinfo.org/glycan/G05518TD" | denotes | all |
| GlycanIUPAC_T96 | 488-491 | "http://rdf.glycoinfo.org/glycan/G62603DN" | denotes | all |
| GlycanIUPAC_T97 | 488-491 | "http://rdf.glycoinfo.org/glycan/G59574FS" | denotes | all |
| GlycanIUPAC_T98 | 488-491 | "http://rdf.glycoinfo.org/glycan/G47567WC" | denotes | all |
performance-test
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| PD-UBERON-AE-B_T1 | 185-191 | http://purl.obolibrary.org/obo/UBERON_0000922 | denotes | embryo |
| PD-UBERON-AE-B_T2 | 420-431 | http://purl.obolibrary.org/obo/UBERON_0000923 | denotes | germ layers |
| PD-UBERON-AE-B_T3 | 433-441 | http://purl.obolibrary.org/obo/UBERON_0000925 | denotes | endoderm |
| PD-UBERON-AE-B_T4 | 691-699 | http://purl.obolibrary.org/obo/UBERON_0000925 | denotes | endoderm |
| PD-UBERON-AE-B_T5 | 443-451 | http://purl.obolibrary.org/obo/UBERON_0000924 | denotes | ectoderm |
| PD-UBERON-AE-B_T6 | 619-627 | http://purl.obolibrary.org/obo/UBERON_0000924 | denotes | ectoderm |
| PD-UBERON-AE-B_T7 | 456-464 | http://purl.obolibrary.org/obo/UBERON_0000926 | denotes | mesoderm |
| PD-UBERON-AE-B_T8 | 580-590 | http://purl.obolibrary.org/obo/UBERON_0003104 | denotes | mesenchyme |
| PD-UBERON-AE-B_T9 | 966-976 | http://purl.obolibrary.org/obo/UBERON_0003104 | denotes | mesenchyme |
| PD-UBERON-AE-B_T10 | 997-1008 | http://purl.obolibrary.org/obo/UBERON_0004735 | denotes | archenteron |
Anatomy-MAT
| Id | Subject | Object | Predicate | Lexical cue | mat_id |
|---|---|---|---|---|---|
| T1 | 185-191 | Body_part | denotes | embryo | http://purl.obolibrary.org/obo/MAT_0000226 |
| T2 | 433-441 | Body_part | denotes | endoderm | http://purl.obolibrary.org/obo/MAT_0000175 |
| T3 | 443-451 | Body_part | denotes | ectoderm | http://purl.obolibrary.org/obo/MAT_0000173|http://purl.obolibrary.org/obo/MAT_0000155 |
| T5 | 456-464 | Body_part | denotes | mesoderm | http://purl.obolibrary.org/obo/MAT_0000174 |
| T6 | 475-487 | Body_part | denotes | gastrulation | http://purl.obolibrary.org/obo/MAT_0000179 |
| T7 | 559-571 | Body_part | denotes | gastrulation | http://purl.obolibrary.org/obo/MAT_0000179 |
| T8 | 619-627 | Body_part | denotes | ectoderm | http://purl.obolibrary.org/obo/MAT_0000173|http://purl.obolibrary.org/obo/MAT_0000155 |
| T10 | 691-699 | Body_part | denotes | endoderm | http://purl.obolibrary.org/obo/MAT_0000175 |
Lectin-Jamboree
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 125-131 | lectin | denotes | lectin |
| T2 | 332-338 | lectin | denotes | lectin |
Lectin-Jamboree-Sentence
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 0-141 | Sentence | denotes | The structure and activities of echinonectin: a developmentally regulated cell adhesion glycoprotein with galactose-specific lectin activity. |
| T2 | 142-262 | Sentence | denotes | The extracellular matrix of the sea urchin embryo contains a 230 kD homodimeric glycoprotein known as echinonectin (EN). |
| T3 | 263-348 | Sentence | denotes | EN contains a cell attachment domain as well as a galactose-specific lectin activity. |
| T4 | 349-465 | Sentence | denotes | Cell attachment to EN is differentially regulated in the three primary germ layers, endoderm, ectoderm and mesoderm. |
| T5 | 466-756 | Sentence | denotes | Prior to gastrulation all embryonic cells adhere equally to EN-coated substrates, but during gastrulation primary mesenchyme cells lose affinity for EN, ectoderm cells increase their binding to the molecule, and cells of the endoderm maintain a similar or slightly lowered level of binding. |
| T6 | 757-887 | Sentence | denotes | The mechanisms governing these adhesive changes and the specific functions they serve in development are not currently understood. |
| T7 | 888-1117 | Sentence | denotes | They are timed to coincide with distinct morphogenetic events such as primary mesenchyme cell ingression and archenteron formation, suggesting that regulated adhesion to EN plays at least a permissive role in early morphogenesis. |
NCBITAXON
| Id | Subject | Object | Predicate | Lexical cue | db_id |
|---|---|---|---|---|---|
| T1 | 174-184 | OrganismTaxon | denotes | sea urchin | 7625 |
Anatomy-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T1 | 146-166 | Body_part | denotes | extracellular matrix | http://purl.obolibrary.org/obo/GO_0031012 |
| T2 | 185-191 | Body_part | denotes | embryo | http://purl.obolibrary.org/obo/UBERON_0000922 |
| T3 | 412-431 | Body_part | denotes | primary germ layers | http://purl.obolibrary.org/obo/UBERON_0000923 |
| T4 | 433-441 | Body_part | denotes | endoderm | http://purl.obolibrary.org/obo/UBERON_0000925 |
| T5 | 443-451 | Body_part | denotes | ectoderm | http://purl.obolibrary.org/obo/UBERON_0000924 |
| T6 | 456-464 | Body_part | denotes | mesoderm | http://purl.obolibrary.org/obo/UBERON_0000926 |
| T7 | 580-596 | Body_part | denotes | mesenchyme cells | http://purl.obolibrary.org/obo/CL_0008019 |
| T8 | 619-633 | Body_part | denotes | ectoderm cells | http://purl.obolibrary.org/obo/CL_0000221 |
| T9 | 691-699 | Body_part | denotes | endoderm | http://purl.obolibrary.org/obo/UBERON_0000925 |
| T10 | 966-981 | Body_part | denotes | mesenchyme cell | http://purl.obolibrary.org/obo/CL_0008019 |
| T11 | 997-1008 | Body_part | denotes | archenteron | http://purl.obolibrary.org/obo/UBERON_0004735 |