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pqqtest_sentence

Id Subject Object Predicate Lexical cue
M_0 270-278 xzyao:10244 denotes UV light
M_1 203-225 xzyao:20824 denotes chitin oligosaccharide
M_2 989-1011 xzyao:20824 denotes chitin oligosaccharide
M_3 157-187 xzyao:25207 denotes suspension-cultured rice cells
M_4 514-556 xzyao:25556 denotes microsomal cytochrome P-450 monooxygenases
M_5 705-729 xzyao:27954 denotes momilactone biosynthesis
M_6 1125-1149 xzyao:27954 denotes momilactone biosynthesis
M_7 1570-1594 xzyao:27954 denotes momilactone biosynthesis
M_8 1697-1721 xzyao:27954 denotes momilactone biosynthesis
M_9 242-253 xzyao:35993 denotes rice leaves
M_10 676-689 funRiceGene:288 denotes dehydrogenase
M_11 889-902 funRiceGene:288 denotes dehydrogenase
M_12 177-187 xzyao:9292 denotes rice cells
M_13 168-187 xzyao:1229 denotes cultured rice cells
M_14 1670-1676 xzyao:15915 denotes a gene
M_15 1456-1485 xzyao:36798 denotes elicitor-inducible production
M_16 1201-1217 hunflair:NA:Species denotes Escherichia coli
M_17 127-140 hunflair:NA:Chemical denotes phytocassanes
M_18 77-101 hunflair:NA:Chemical denotes diterpenoid phytoalexins
M_19 89-101 hunflair:NA:Chemical denotes phytoalexins
M_20 445-457 hunflair:NA:Chemical denotes phytoalexins
M_21 652-664 hunflair:NA:Chemical denotes phytoalexins
M_22 525-556 hunflair:NA:Gene denotes cytochrome P-450 monooxygenases
M_23 346-355 hunflair:NA:Chemical denotes diterpene
M_24 614-623 hunflair:NA:Chemical denotes diterpene
M_25 804-813 hunflair:NA:Chemical denotes diterpene
M_26 1089-1098 hunflair:NA:Chemical denotes diterpene
M_27 676-689 hunflair:NA:Gene denotes dehydrogenase
M_28 889-902 hunflair:NA:Gene denotes dehydrogenase
M_29 301-327 hunflair:NA:Chemical denotes geranylgeranyl diphosphate
M_30 558-564 hunflair:NA:Gene denotes P-450s
M_31 58-70 hunflair:NA:Chemical denotes momilactones
M_32 110-122 hunflair:NA:Chemical denotes momilactones
M_33 1489-1501 hunflair:NA:Chemical denotes momilactones
M_34 1266-1282 hunflair:NA:Gene denotes AK103462 protein
M_35 961-968 hunflair:NA:Gene denotes CYP99A2
M_36 1408-1415 hunflair:NA:Gene denotes CYP99A2
M_37 1528-1535 hunflair:NA:Gene denotes CYP99A2
M_38 346-367 hunflair:NA:Chemical denotes diterpene hydrocarbon
M_39 1089-1106 hunflair:NA:Gene denotes diterpene cyclase
M_40 614-636 hunflair:NA:Chemical denotes diterpene hydrocarbons
M_41 804-826 hunflair:NA:Chemical denotes diterpene hydrocarbons
M_42 948-959 hunflair:NA:Gene denotes P-450 genes
M_43 1077-1083 hunflair:NA:Gene denotes OsCyc1
M_44 705-716 hunflair:NA:Chemical denotes momilactone
M_45 1125-1136 hunflair:NA:Chemical denotes momilactone
M_46 1369-1380 hunflair:NA:Chemical denotes momilactone
M_47 1570-1581 hunflair:NA:Chemical denotes momilactone
M_48 1697-1708 hunflair:NA:Chemical denotes momilactone
M_49 1311-1363 hunflair:NA:Chemical denotes 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide
M_50 1067-1072 hunflair:NA:Gene denotes OsKS4
M_51 72-76 hunflair:NA:Species denotes Rice
M_52 973-980 hunflair:NA:Gene denotes CYP99A3
M_53 1420-1427 hunflair:NA:Gene denotes CYP99A3
M_54 1537-1544 hunflair:NA:Gene denotes CYP99A3
M_55 210-225 hunflair:NA:Chemical denotes oligosaccharide
M_56 996-1011 hunflair:NA:Chemical denotes oligosaccharide
M_57 49-53 hunflair:NA:Species denotes rice
M_58 177-181 hunflair:NA:Species denotes rice
M_59 242-246 hunflair:NA:Species denotes rice
M_60 752-759 hunflair:NA:Gene denotes enzymes
M_61 77-88 pubtator:MESH:C503616:Chemical denotes diterpenoid
M_62 301-327 pubtator:MESH:C002963:Chemical denotes geranylgeranyl diphosphate
M_63 1201-1217 pubtator:562:Species denotes Escherichia coli
M_64 72-76 pubtator:4530:Species denotes Rice
M_65 58-70 pubtator:MESH:C116023:Chemical denotes momilactones
M_66 110-122 pubtator:MESH:C116023:Chemical denotes momilactones
M_67 1489-1501 pubtator:MESH:C116023:Chemical denotes momilactones
M_68 346-367 pubtator:MESH:D004224:Chemical denotes diterpene hydrocarbon
M_69 1369-1382 pubtator:MESH:C116023:Chemical denotes momilactone A
M_70 127-140 pubtator::Chemical denotes phytocassanes
M_71 614-636 pubtator:MESH:D004224:Chemical denotes diterpene hydrocarbons
M_72 804-826 pubtator:MESH:D004224:Chemical denotes diterpene hydrocarbons
M_73 49-53 pubtator:4530:Species denotes rice
M_74 177-181 pubtator:4530:Species denotes rice
M_75 242-246 pubtator:4530:Species denotes rice
M_76 705-716 pubtator:MESH:C116023:Chemical denotes momilactone
M_77 1125-1136 pubtator:MESH:C116023:Chemical denotes momilactone
M_78 1369-1380 pubtator:MESH:C116023:Chemical denotes momilactone
M_79 1570-1581 pubtator:MESH:C116023:Chemical denotes momilactone
M_80 1697-1708 pubtator:MESH:C116023:Chemical denotes momilactone

21k_plant_trait_mention

Id Subject Object Predicate Lexical cue
M_0 72-101 xzyao:6419 denotes Rice diterpenoid phytoalexins
M_1 676-689 funRiceGene:288 denotes dehydrogenase
M_2 889-902 funRiceGene:288 denotes dehydrogenase
M_3 948-959 hunflair:NA:Gene denotes P-450 genes
M_4 301-327 hunflair:NA:Chemical denotes geranylgeranyl diphosphate
M_5 676-689 hunflair:NA:Gene denotes dehydrogenase
M_6 889-902 hunflair:NA:Gene denotes dehydrogenase
M_7 1089-1106 hunflair:NA:Gene denotes diterpene cyclase
M_8 752-759 hunflair:NA:Gene denotes enzymes
M_9 72-76 hunflair:NA:Species denotes Rice
M_10 614-636 hunflair:NA:Chemical denotes diterpene hydrocarbons
M_11 804-826 hunflair:NA:Chemical denotes diterpene hydrocarbons
M_12 558-564 hunflair:NA:Gene denotes P-450s
M_13 346-355 hunflair:NA:Chemical denotes diterpene
M_14 614-623 hunflair:NA:Chemical denotes diterpene
M_15 804-813 hunflair:NA:Chemical denotes diterpene
M_16 1089-1098 hunflair:NA:Chemical denotes diterpene
M_17 961-968 hunflair:NA:Gene denotes CYP99A2
M_18 1408-1415 hunflair:NA:Gene denotes CYP99A2
M_19 1528-1535 hunflair:NA:Gene denotes CYP99A2
M_20 1266-1282 hunflair:NA:Gene denotes AK103462 protein
M_21 127-140 hunflair:NA:Chemical denotes phytocassanes
M_22 973-980 hunflair:NA:Gene denotes CYP99A3
M_23 1420-1427 hunflair:NA:Gene denotes CYP99A3
M_24 1537-1544 hunflair:NA:Gene denotes CYP99A3
M_25 346-367 hunflair:NA:Chemical denotes diterpene hydrocarbon
M_26 1067-1072 hunflair:NA:Gene denotes OsKS4
M_27 77-101 hunflair:NA:Chemical denotes diterpenoid phytoalexins
M_28 1201-1217 hunflair:NA:Species denotes Escherichia coli
M_29 89-101 hunflair:NA:Chemical denotes phytoalexins
M_30 445-457 hunflair:NA:Chemical denotes phytoalexins
M_31 652-664 hunflair:NA:Chemical denotes phytoalexins
M_32 1311-1363 hunflair:NA:Chemical denotes 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide
M_33 58-70 hunflair:NA:Chemical denotes momilactones
M_34 110-122 hunflair:NA:Chemical denotes momilactones
M_35 1489-1501 hunflair:NA:Chemical denotes momilactones
M_36 210-225 hunflair:NA:Chemical denotes oligosaccharide
M_37 996-1011 hunflair:NA:Chemical denotes oligosaccharide
M_38 49-53 hunflair:NA:Species denotes rice
M_39 177-181 hunflair:NA:Species denotes rice
M_40 242-246 hunflair:NA:Species denotes rice
M_41 705-716 hunflair:NA:Chemical denotes momilactone
M_42 1125-1136 hunflair:NA:Chemical denotes momilactone
M_43 1369-1380 hunflair:NA:Chemical denotes momilactone
M_44 1570-1581 hunflair:NA:Chemical denotes momilactone
M_45 1697-1708 hunflair:NA:Chemical denotes momilactone
M_46 1077-1083 hunflair:NA:Gene denotes OsCyc1
M_47 525-556 hunflair:NA:Gene denotes cytochrome P-450 monooxygenases
M_48 127-140 pubtator::Chemical denotes phytocassanes
M_49 346-367 pubtator:MESH:D004224:Chemical denotes diterpene hydrocarbon
M_50 614-636 pubtator:MESH:D004224:Chemical denotes diterpene hydrocarbons
M_51 804-826 pubtator:MESH:D004224:Chemical denotes diterpene hydrocarbons
M_52 301-327 pubtator:MESH:C002963:Chemical denotes geranylgeranyl diphosphate
M_53 77-88 pubtator:MESH:C503616:Chemical denotes diterpenoid
M_54 1369-1382 pubtator:MESH:C116023:Chemical denotes momilactone A
M_55 705-716 pubtator:MESH:C116023:Chemical denotes momilactone
M_56 1125-1136 pubtator:MESH:C116023:Chemical denotes momilactone
M_57 1369-1380 pubtator:MESH:C116023:Chemical denotes momilactone
M_58 1570-1581 pubtator:MESH:C116023:Chemical denotes momilactone
M_59 1697-1708 pubtator:MESH:C116023:Chemical denotes momilactone
M_60 1201-1217 pubtator:562:Species denotes Escherichia coli
M_61 58-70 pubtator:MESH:C116023:Chemical denotes momilactones
M_62 110-122 pubtator:MESH:C116023:Chemical denotes momilactones
M_63 1489-1501 pubtator:MESH:C116023:Chemical denotes momilactones
M_64 49-53 pubtator:4530:Species denotes rice
M_65 177-181 pubtator:4530:Species denotes rice
M_66 242-246 pubtator:4530:Species denotes rice
M_67 72-76 pubtator:4530:Species denotes Rice

OryzaGP_2022

Id Subject Object Predicate Lexical cue
T1 525-541 http://identifiers.org/oryzabase.gene/22576 denotes cytochrome P-450
T2 525-541 http://identifiers.org/oryzabase.gene/18249 denotes cytochrome P-450
T3 525-541 http://identifiers.org/oryzabase.gene/16778 denotes cytochrome P-450

OryzaGP_2021_v2

Id Subject Object Predicate Lexical cue
T1 961-968 http://identifiers.org/oryzabase.gene/7171 denotes CYP99A2
T2 973-980 http://identifiers.org/oryzabase.gene/7172 denotes CYP99A3
T3 1067-1072 http://identifiers.org/oryzabase.gene/3134 denotes OsKS4
T4 1077-1083 http://identifiers.org/oryzabase.gene/3130 denotes OsCyc1
T5 1408-1415 http://identifiers.org/oryzabase.gene/7171 denotes CYP99A2
T6 1420-1427 http://identifiers.org/oryzabase.gene/7172 denotes CYP99A3
T7 1528-1535 http://identifiers.org/oryzabase.gene/7171 denotes CYP99A2
T8 1537-1544 http://identifiers.org/oryzabase.gene/7172 denotes CYP99A3
T3636 961-968 http://identifiers.org/rapdb.locus/Os04g0180400 denotes CYP99A2
T52534 973-980 http://identifiers.org/rapdb.locus/Os04g0178400 denotes CYP99A3
T20783 1067-1072 http://identifiers.org/rapdb.locus/Os04g0179700 denotes OsKS4
T5980 1077-1083 http://identifiers.org/rapdb.locus/Os04g0178300 denotes OsCyc1
T57095 1408-1415 http://identifiers.org/rapdb.locus/Os04g0180400 denotes CYP99A2
T34695 1420-1427 http://identifiers.org/rapdb.locus/Os04g0178400 denotes CYP99A3
T15685 1528-1535 http://identifiers.org/rapdb.locus/Os04g0180400 denotes CYP99A2
T32619 1537-1544 http://identifiers.org/rapdb.locus/Os04g0178400 denotes CYP99A3

sentences

Id Subject Object Predicate Lexical cue
T1 0-71 Sentence denotes Identification of a biosynthetic gene cluster in rice for momilactones.
T2 72-279 Sentence denotes Rice diterpenoid phytoalexins such as momilactones and phytocassanes are produced in suspension-cultured rice cells treated with a chitin oligosaccharide elicitor and in rice leaves irradiated with UV light.
T3 280-486 Sentence denotes The common substrate geranylgeranyl diphosphate is converted into diterpene hydrocarbon precursors via a two-step sequential cyclization and then into the bioactive phytoalexins via several oxidation steps.
T4 487-730 Sentence denotes It has been suggested that microsomal cytochrome P-450 monooxygenases (P-450s) are involved in the downstream oxidation of the diterpene hydrocarbons leading to the phytoalexins and that a dehydrogenase is involved in momilactone biosynthesis.
T5 731-848 Sentence denotes However, none of the enzymes involved in the downstream oxidation of the diterpene hydrocarbons have been identified.
T6 849-1150 Sentence denotes In this study, we found that a putative dehydrogenase gene (AK103462) and two functionally unknown P-450 genes (CYP99A2 and CYP99A3) form a chitin oligosaccharide elicitor- and UV-inducible gene cluster, together with OsKS4 and OsCyc1, the diterpene cyclase genes involved in momilactone biosynthesis.
T7 1151-1383 Sentence denotes Functional analysis by heterologous expression in Escherichia coli followed by enzyme assays demonstrated that the AK103462 protein catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A.
T8 1384-1595 Sentence denotes The double knockdown of CYP99A2 and CYP99A3 specifically suppressed the elicitor-inducible production of momilactones, strongly suggesting that CYP99A2, CYP99A3, or both are involved in momilactone biosynthesis.
T9 1596-1722 Sentence denotes These results provide strong evidence for the presence on chromosome 4 of a gene cluster involved in momilactone biosynthesis.

OryzaGP_2021_FLAIR

Id Subject Object Predicate Lexical cue
M_0 346-355 hunflair:NA:Chemical denotes diterpene
M_1 614-623 hunflair:NA:Chemical denotes diterpene
M_2 804-813 hunflair:NA:Chemical denotes diterpene
M_3 1089-1098 hunflair:NA:Chemical denotes diterpene
M_4 525-556 hunflair:NA:Gene denotes cytochrome P-450 monooxygenases
M_5 210-225 hunflair:NA:Chemical denotes oligosaccharide
M_6 996-1011 hunflair:NA:Chemical denotes oligosaccharide
M_7 1369-1383 hunflair:NA:Chemical denotes momilactone A.
M_8 301-327 hunflair:NA:Chemical denotes geranylgeranyl diphosphate
M_9 1266-1282 hunflair:NA:Gene denotes AK103462 protein
M_10 346-367 hunflair:NA:Chemical denotes diterpene hydrocarbon
M_11 72-76 hunflair:NA:Species denotes Rice
M_12 973-980 hunflair:NA:Gene denotes CYP99A3
M_13 1420-1427 hunflair:NA:Gene denotes CYP99A3
M_14 1537-1544 hunflair:NA:Gene denotes CYP99A3
M_15 49-53 hunflair:NA:Species denotes rice
M_16 177-181 hunflair:NA:Species denotes rice
M_17 242-246 hunflair:NA:Species denotes rice
M_18 558-564 hunflair:NA:Gene denotes P-450s
M_19 614-636 hunflair:NA:Chemical denotes diterpene hydrocarbons
M_20 804-826 hunflair:NA:Chemical denotes diterpene hydrocarbons
M_21 58-70 hunflair:NA:Chemical denotes momilactones
M_22 110-122 hunflair:NA:Chemical denotes momilactones
M_23 1489-1501 hunflair:NA:Chemical denotes momilactones
M_24 127-140 hunflair:NA:Chemical denotes phytocassanes
M_25 752-759 hunflair:NA:Gene denotes enzymes
M_26 89-101 hunflair:NA:Chemical denotes phytoalexins
M_27 445-457 hunflair:NA:Chemical denotes phytoalexins
M_28 652-664 hunflair:NA:Chemical denotes phytoalexins
M_29 705-716 hunflair:NA:Chemical denotes momilactone
M_30 1125-1136 hunflair:NA:Chemical denotes momilactone
M_31 1369-1380 hunflair:NA:Chemical denotes momilactone
M_32 1570-1581 hunflair:NA:Chemical denotes momilactone
M_33 1697-1708 hunflair:NA:Chemical denotes momilactone
M_34 1201-1217 hunflair:NA:Species denotes Escherichia coli
M_35 77-101 hunflair:NA:Chemical denotes diterpenoid phytoalexins
M_36 676-689 hunflair:NA:Gene denotes dehydrogenase
M_37 889-902 hunflair:NA:Gene denotes dehydrogenase
M_38 1089-1106 hunflair:NA:Gene denotes diterpene cyclase
M_39 1067-1072 hunflair:NA:Gene denotes OsKS4
M_40 948-959 hunflair:NA:Gene denotes P-450 genes
M_41 1311-1363 hunflair:NA:Chemical denotes 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide
M_42 1077-1083 hunflair:NA:Gene denotes OsCyc1
M_43 961-968 hunflair:NA:Gene denotes CYP99A2
M_44 1408-1415 hunflair:NA:Gene denotes CYP99A2
M_45 1528-1535 hunflair:NA:Gene denotes CYP99A2

OryzaGP_2021

Id Subject Object Predicate Lexical cue
T1 525-541 http://identifiers.org/oryzabase.gene/22648 denotes cytochrome P-450
T2 525-541 http://identifiers.org/oryzabase.gene/22576 denotes cytochrome P-450
T3 525-541 http://identifiers.org/oryzabase.gene/16778 denotes cytochrome P-450
T4 961-968 http://identifiers.org/oryzabase.gene/7171 denotes CYP99A2
T5 973-980 http://identifiers.org/oryzabase.gene/7172 denotes CYP99A3
T6 1067-1072 http://identifiers.org/oryzabase.gene/3134 denotes OsKS4
T7 1077-1083 http://identifiers.org/oryzabase.gene/3130 denotes OsCyc1
T8 1408-1415 http://identifiers.org/oryzabase.gene/7171 denotes CYP99A2
T9 1420-1427 http://identifiers.org/oryzabase.gene/7172 denotes CYP99A3
T10 1528-1535 http://identifiers.org/oryzabase.gene/7171 denotes CYP99A2
T11 1537-1544 http://identifiers.org/oryzabase.gene/7172 denotes CYP99A3
T90376 525-541 http://identifiers.org/ricegap/LOC_Os10g36980 denotes cytochrome P-450
T15439 525-541 http://identifiers.org/ricegap/LOC_Os08g43440 denotes cytochrome P-450
T76266 525-541 http://identifiers.org/ricegap/LOC_Os02g26770 denotes cytochrome P-450
T93427 961-968 http://identifiers.org/ricegap/LOC_Os04g10160 denotes CYP99A2
T21473 973-980 http://identifiers.org/ricegap/LOC_Os04g09920 denotes CYP99A3
T85144 1067-1072 http://identifiers.org/ricegap/LOC_Os04g10060 denotes OsKS4
T84416 1077-1083 http://identifiers.org/ricegap/LOC_Os04g09900 denotes OsCyc1
T15937 1408-1415 http://identifiers.org/ricegap/LOC_Os04g10160 denotes CYP99A2
T34963 1420-1427 http://identifiers.org/ricegap/LOC_Os04g09920 denotes CYP99A3
T21733 1528-1535 http://identifiers.org/ricegap/LOC_Os04g10160 denotes CYP99A2
T90843 1537-1544 http://identifiers.org/ricegap/LOC_Os04g09920 denotes CYP99A3
T76134 525-541 http://identifiers.org/rapdb.locus/Os10g0513900 denotes cytochrome P-450
T95115 525-541 http://identifiers.org/rapdb.locus/Os08g0547900 denotes cytochrome P-450
T55619 525-541 http://identifiers.org/rapdb.locus/Os02g0467000 denotes cytochrome P-450
T99781 961-968 http://identifiers.org/rapdb.locus/Os04g0180400 denotes CYP99A2
T77496 973-980 http://identifiers.org/rapdb.locus/Os04g0178400 denotes CYP99A3
T28645 1067-1072 http://identifiers.org/rapdb.locus/Os04g0179700 denotes OsKS4
T28975 1077-1083 http://identifiers.org/rapdb.locus/Os04g0178300 denotes OsCyc1
T46883 1408-1415 http://identifiers.org/rapdb.locus/Os04g0180400 denotes CYP99A2
T88690 1420-1427 http://identifiers.org/rapdb.locus/Os04g0178400 denotes CYP99A3
T96494 1528-1535 http://identifiers.org/rapdb.locus/Os04g0180400 denotes CYP99A2
T18200 1537-1544 http://identifiers.org/rapdb.locus/Os04g0178400 denotes CYP99A3
T47786 525-541 http://identifiers.org/uniprot/B4FQ24 denotes cytochrome P-450
T96931 525-541 http://identifiers.org/refseq/NP_001151365.1 denotes cytochrome P-450
T88603 525-541 http://identifiers.org/refseq/NP_001147503.1 denotes cytochrome P-450
T88675 961-968 http://identifiers.org/uniprot/Q7X7X4 denotes CYP99A2
T66412 973-980 http://identifiers.org/uniprot/Q0JF01 denotes CYP99A3
T90660 1067-1072 http://identifiers.org/uniprot/Q0JEZ8 denotes OsKS4
T22110 1077-1083 http://identifiers.org/uniprot/Q0JF02-3 denotes OsCyc1
T76020 1077-1083 http://identifiers.org/uniprot/Q0JF02 denotes OsCyc1
T49869 1408-1415 http://identifiers.org/uniprot/Q7X7X4 denotes CYP99A2
T80360 1420-1427 http://identifiers.org/uniprot/Q0JF01 denotes CYP99A3
T84944 1528-1535 http://identifiers.org/uniprot/Q7X7X4 denotes CYP99A2
T12 1537-1544 http://identifiers.org/uniprot/Q0JF01 denotes CYP99A3
M_0 346-355 hunflair:NA:Chemical denotes diterpene
M_1 614-623 hunflair:NA:Chemical denotes diterpene
M_2 804-813 hunflair:NA:Chemical denotes diterpene
M_3 1089-1098 hunflair:NA:Chemical denotes diterpene
M_4 525-556 hunflair:NA:Gene denotes cytochrome P-450 monooxygenases
M_5 210-225 hunflair:NA:Chemical denotes oligosaccharide
M_6 996-1011 hunflair:NA:Chemical denotes oligosaccharide
M_7 1369-1383 hunflair:NA:Chemical denotes momilactone A.
M_8 301-327 hunflair:NA:Chemical denotes geranylgeranyl diphosphate
M_9 1266-1282 hunflair:NA:Gene denotes AK103462 protein
M_10 346-367 hunflair:NA:Chemical denotes diterpene hydrocarbon
M_11 72-76 hunflair:NA:Species denotes Rice
M_12 973-980 hunflair:NA:Gene denotes CYP99A3
M_13 1420-1427 hunflair:NA:Gene denotes CYP99A3
M_14 1537-1544 hunflair:NA:Gene denotes CYP99A3
M_15 49-53 hunflair:NA:Species denotes rice
M_16 177-181 hunflair:NA:Species denotes rice
M_17 242-246 hunflair:NA:Species denotes rice
M_18 558-564 hunflair:NA:Gene denotes P-450s
M_19 614-636 hunflair:NA:Chemical denotes diterpene hydrocarbons
M_20 804-826 hunflair:NA:Chemical denotes diterpene hydrocarbons
M_21 58-70 hunflair:NA:Chemical denotes momilactones
M_22 110-122 hunflair:NA:Chemical denotes momilactones
M_23 1489-1501 hunflair:NA:Chemical denotes momilactones
M_24 127-140 hunflair:NA:Chemical denotes phytocassanes
M_25 752-759 hunflair:NA:Gene denotes enzymes
M_26 89-101 hunflair:NA:Chemical denotes phytoalexins
M_27 445-457 hunflair:NA:Chemical denotes phytoalexins
M_28 652-664 hunflair:NA:Chemical denotes phytoalexins
M_29 705-716 hunflair:NA:Chemical denotes momilactone
M_30 1125-1136 hunflair:NA:Chemical denotes momilactone
M_31 1369-1380 hunflair:NA:Chemical denotes momilactone
M_32 1570-1581 hunflair:NA:Chemical denotes momilactone
M_33 1697-1708 hunflair:NA:Chemical denotes momilactone
M_34 1201-1217 hunflair:NA:Species denotes Escherichia coli
M_35 77-101 hunflair:NA:Chemical denotes diterpenoid phytoalexins
M_36 676-689 hunflair:NA:Gene denotes dehydrogenase
M_37 889-902 hunflair:NA:Gene denotes dehydrogenase
M_38 1089-1106 hunflair:NA:Gene denotes diterpene cyclase
M_39 1067-1072 hunflair:NA:Gene denotes OsKS4
M_40 948-959 hunflair:NA:Gene denotes P-450 genes
M_41 1311-1363 hunflair:NA:Chemical denotes 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide
M_42 1077-1083 hunflair:NA:Gene denotes OsCyc1
M_43 961-968 hunflair:NA:Gene denotes CYP99A2
M_44 1408-1415 hunflair:NA:Gene denotes CYP99A2
M_45 1528-1535 hunflair:NA:Gene denotes CYP99A2

GlyCosmos15-Glycan

Id Subject Object Predicate Lexical cue image
T1 203-209 Glycan denotes chitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G97099AY
T2 989-995 Glycan denotes chitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G97099AY

Glycan-GlyCosmos

Id Subject Object Predicate Lexical cue image
T1 203-209 Glycan denotes chitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G97099AY
T2 989-995 Glycan denotes chitin https://api.glycosmos.org/wurcs2image/latest/png/binary/G97099AY

GlyCosmos15-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1654-1664 Body_part denotes chromosome http://purl.obolibrary.org/obo/GO_0005694

GlyCosmos15-Taxon

Id Subject Object Predicate Lexical cue db_id
T1 49-53 Organism denotes rice 4530
T2 177-181 Organism denotes rice 4530
T3 242-246 Organism denotes rice 4530
T4 1201-1217 Organism denotes Escherichia coli 562

GlyCosmos15-Sentences

Id Subject Object Predicate Lexical cue
T1 0-71 Sentence denotes Identification of a biosynthetic gene cluster in rice for momilactones.
T2 72-279 Sentence denotes Rice diterpenoid phytoalexins such as momilactones and phytocassanes are produced in suspension-cultured rice cells treated with a chitin oligosaccharide elicitor and in rice leaves irradiated with UV light.
T3 280-486 Sentence denotes The common substrate geranylgeranyl diphosphate is converted into diterpene hydrocarbon precursors via a two-step sequential cyclization and then into the bioactive phytoalexins via several oxidation steps.
T4 487-730 Sentence denotes It has been suggested that microsomal cytochrome P-450 monooxygenases (P-450s) are involved in the downstream oxidation of the diterpene hydrocarbons leading to the phytoalexins and that a dehydrogenase is involved in momilactone biosynthesis.
T5 731-848 Sentence denotes However, none of the enzymes involved in the downstream oxidation of the diterpene hydrocarbons have been identified.
T6 849-1150 Sentence denotes In this study, we found that a putative dehydrogenase gene (AK103462) and two functionally unknown P-450 genes (CYP99A2 and CYP99A3) form a chitin oligosaccharide elicitor- and UV-inducible gene cluster, together with OsKS4 and OsCyc1, the diterpene cyclase genes involved in momilactone biosynthesis.
T7 1151-1595 Sentence denotes Functional analysis by heterologous expression in Escherichia coli followed by enzyme assays demonstrated that the AK103462 protein catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A. The double knockdown of CYP99A2 and CYP99A3 specifically suppressed the elicitor-inducible production of momilactones, strongly suggesting that CYP99A2, CYP99A3, or both are involved in momilactone biosynthesis.
T8 1596-1722 Sentence denotes These results provide strong evidence for the presence on chromosome 4 of a gene cluster involved in momilactone biosynthesis.

Oryza_sentences

Id Subject Object Predicate Lexical cue
T1 0-71 Sentence denotes Identification of a biosynthetic gene cluster in rice for momilactones.
T2 72-279 Sentence denotes Rice diterpenoid phytoalexins such as momilactones and phytocassanes are produced in suspension-cultured rice cells treated with a chitin oligosaccharide elicitor and in rice leaves irradiated with UV light.
T3 280-486 Sentence denotes The common substrate geranylgeranyl diphosphate is converted into diterpene hydrocarbon precursors via a two-step sequential cyclization and then into the bioactive phytoalexins via several oxidation steps.
T4 487-730 Sentence denotes It has been suggested that microsomal cytochrome P-450 monooxygenases (P-450s) are involved in the downstream oxidation of the diterpene hydrocarbons leading to the phytoalexins and that a dehydrogenase is involved in momilactone biosynthesis.
T5 731-848 Sentence denotes However, none of the enzymes involved in the downstream oxidation of the diterpene hydrocarbons have been identified.
T6 849-1150 Sentence denotes In this study, we found that a putative dehydrogenase gene (AK103462) and two functionally unknown P-450 genes (CYP99A2 and CYP99A3) form a chitin oligosaccharide elicitor- and UV-inducible gene cluster, together with OsKS4 and OsCyc1, the diterpene cyclase genes involved in momilactone biosynthesis.
T7 1151-1595 Sentence denotes Functional analysis by heterologous expression in Escherichia coli followed by enzyme assays demonstrated that the AK103462 protein catalyzes the conversion of 3beta-hydroxy-9betaH-pimara-7,15-dien-19,6beta-olide into momilactone A. The double knockdown of CYP99A2 and CYP99A3 specifically suppressed the elicitor-inducible production of momilactones, strongly suggesting that CYP99A2, CYP99A3, or both are involved in momilactone biosynthesis.
T8 1596-1722 Sentence denotes These results provide strong evidence for the presence on chromosome 4 of a gene cluster involved in momilactone biosynthesis.

GlyCosmos15-FMA

Id Subject Object Predicate Lexical cue db_id
T1 514-524 Body_part denotes microsomal FMA:67438
T2 1654-1664 Body_part denotes chromosome FMA:67093

NCBITAXON

Id Subject Object Predicate Lexical cue db_id
T1 49-53 OrganismTaxon denotes rice 4530
T2 72-76 OrganismTaxon denotes Rice 4530
T3 177-181 OrganismTaxon denotes rice 4530
T4 242-246 OrganismTaxon denotes rice 4530
T5 1201-1217 OrganismTaxon denotes Escherichia coli 562

Anatomy-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T1 1654-1664 Body_part denotes chromosome http://purl.obolibrary.org/obo/GO_0005694